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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1277648..1279402+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039544 ID=XLOC_039544|Name=XLOC_039544|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1755bp|location=Sequence derived from alignment at sc0000043_pilon:1277648..1279402+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGacttttttgcaaatatttttcaattcgaATTAACAACGCAATG
TAATTGGCTTCCAGCGAATCAGTTTTTATTCCAGCTGGCAAACATTTCCC
TTGTATTGACTTATTTTGTTAAACCAAGTGGTCTTTATGAATTGATCCAG
CTTCGCGTCTCTCTTACATGCGCTGGACTCTGTTTCGGACTATGGGGAGG
AACTGTGATCTGCTCATTAGACTGTATGGTATGGAATCTAGCCTTTACTG
TTGGAAACGCATGTCATTTAGTGTACATTCTAGCCAAAATGTGGCCATCT
CCTTTCAAAAATAGTCACCACGAATTAATTTTTGTTAACGTTTTTGGACC
TGTTGGTTTGAAAAGATATCAATTTAGGACATTGATGACTAAGGCTAAAG
AGATACAACTACAGACTGGGGAGTATTACGCAAGACAGGGTTACACCGAT
TCGAAGCATATTTCAATATTAGCTGACGGATGGTAAGCGCTGGCTACAGT
AGAATATATTTATGTAATCTAGTAAGCTAGGTTGAATACttgattgtaaa
aaaaaagtccCAGCCTTTATACCAATTTACTCTGGATTTCTGCGCTATGA
TAATGAATTCAGATAATATTAAAAAACCCACTGATCTTATGTATGCACCA
GGGGGATCGGTTTCTAGTTCACTTATTCTCTGTTTTCCGTGAGCGTGTTA
ACTCAATAATTCCAGATAATTTGACGCCATTCAAAATTTGTGAATCTGTA
TCGGCTTTACAAGACAAGGAGCTTTTTGGGTACAATGGTGATGTTTGTTT
CCATATGAAGTGTTATAATTCGAAAACTACATAAAATTACAATGAAATTA
ATTTAGATTTATTTCAATTGCTCTGTTAACTTATCAATACTAACTTCAAC
AGGGTTAAGAATTTAGTTTTCTATAGGTACCGATCTtgattctttctttt
gatacagtGTGGAAGTTTTGATTAATGGACAGTCGACCAACTATGTCGAA
CTATTCGAATTCTTAGATTCACCAGAATGGCTGACTCTGACGGATGATGA
TGCACCTTCAAAATATCAGGTTTCTACCTTTTGCTTATCTAATATTCTAA
TTTTATTTGCTTGTCACGCAAAATTCTTTGCTATTATTATCACGATCTAG
AAAAATCGCTGAAATTCATCACCATGCAGTAAAAagtagcccaaatcacg
catcgcATCCTTTAAATTCTTACCCTTTTGCACAGCACTTTGCGAAATCT
TTATTTctccatcacgcaaaaaaaaatttggactcATGCCACCACCACGC
AAGGAAAAAGTCCTGATCACCAAATCACGCAAACCCTCCGGGAGGGGGAT
GCTGGACTGATCCCTTAACTGGGTTAAGCCTACTATAAATGAGGTTAATT
CAACTTTTAAGCGAAGAAGTAAGTTGATAGCCActaattttttgatttgg
tgAAAACGACGGAAACGTTTGTAGGGTAATCTAGTTTTCCCCGGCTCTTT
TCGTCGCGTAGACTGCGTAAACTGTCTAAAGTAAATCTATTTCTTAGATC
ATCACTTTTCCATCAATAGGTTTCTTTAGTAGCTGCGGAAGATTCGGTTA
TCTATCAATTCCAAAGAAAAGACTTGTTTACAATCTTTCGTAAAGATGAA
CTCCTAAAGAATAtctttgattccatcattggTAAAGACATCTGCAAGAA
ATTGTATTCATTACATCAATCCTTCTTGATGAAAGATTGTataaccatag
tataa Coding sequence (CDS) from alignment at sc0000043_pilon:1277648..1279402+ >XLOC_039544 ID=XLOC_039544|Name=XLOC_039544|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1560bp|location=Sequence derived from alignment at sc0000043_pilon:1277648..1279402+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGacttttttgcaaatatttttcaattcgaATTAACAACGCAATG
TAATTGGCTTCCAGCGAATCAGTTTTTATTCCAGCTGGCAAACATTTCCC
TTGTATTGACTTATTTTGTTAAACCAAGTGGTCTTTATGAATTGATCCAG
CTTCGCGTCTCTCTTACATGCGCTGGACTCTGTTTCGGACTATGGGGAGG
AACTGTGATCTGCTCATTAGACTGTATGGTATGGAATCTAGCCTTTACTG
TTGGAAACGCATGTCATTTAGTGTACATTCTAGCCAAAATGTGGCCATCT
CCTTTCAAAAATAGTCACCACGAATTAATTTTTGTTAACGTTTTTGGACC
TGTTGGTTTGAAAAGATATCAATTTAGGACATTGATGACTAAGGCTAAAG
AGATACAACTACAGACTGGGGAGTATTACGCAAGACAGGGTTACACCGAT
TCGAAGCATATTTCAATATTAGCTGACGGATGATGAAGGacttttttgca
aatatttttcaattcgaATTAACAACGCAATGTAATTGGCTTCCAGCGAA
TCAGTTTTTATTCCAGCTGGCAAACATTTCCCTTGTATTGACTTATTTTG
TTAAACCAAGTGGTCTTTATGAATTGATCCAGCTTCGCGTCTCTCTTACA
TGCGCTGGACTCTGTTTCGGACTATGGGGAGGAACTGTGATCTGCTCATT
AGACTGTATGGTATGGAATCTAGCCTTTACTGTTGGAAACGCATGTCATT
TAGTGTACATTCTAGCCAAAATGTGGCCATCTCCTTTCAAAAATAGTCAC
CACGAATTAATTTTTGTTAACGTTTTTGGACCTGTTGGTTTGAAAAGATA
TCAATTTAGGACATTGATGACTAAGGCTAAAGAGATACAACTACAGACTG
GGGAGTATTACGCAAGACAGGGTTACACCGATTCGAAGCATATTTCAATA
TTAGCTGACGGATGtGTGGAAGTTTTGATTAATGGACAGTCGACCAACTA
TGTCGAACTATTCGAATTCTTAGATTCACCAGAATGGCTGACTCTGACGG
ATGATGATGCACCTTCAAAATATCAGtGTGGAAGTTTTGATTAATGGACA
GTCGACCAACTATGTCGAACTATTCGAATTCTTAGATTCACCAGAATGGC
TGACTCTGACGGATGATGATGCACCTTCAAAATATCAGGTTTCTTTAGTA
GCTGCGGAAGATTCGGTTATCTATCAATTCCAAAGAAAAGACTTGTTTAC
AATCTTTCGTAAAGATGAACTCCTAAAGAATAtctttgattccatcattg
gTAAAGACATCTGCAAGAAATTGTATTCATTACATCAATCCTTCTTGATG
AAAGATTGTataaccatagtataaGTTTCTTTAGTAGCTGCGGAAGATTC
GGTTATCTATCAATTCCAAAGAAAAGACTTGTTTACAATCTTTCGTAAAG
ATGAACTCCTAAAGAATAtctttgattccatcattggTAAAGACATCTGC
AAGAAATTGTATTCATTACATCAATCCTTCTTGATGAAAGATTGTataac
catagtataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1277648..1279402 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 595-780:1570 |
| Aaloc | 484-594:959 |
| Aaloc | 1-480:1 |
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