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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1299030..1301322- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039541 ID=XLOC_039541|Name=XLOC_039541|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2293bp|location=Sequence derived from alignment at sc0000043_pilon:1299030..1301322- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACCTTCACACTATCTTTGTTGTTTTAATTGTAAGTATATCATTTAA
TGAATATTCCATTCAAATTGGGTAATCAAATAACCTTCCTTTTTTAGGAA
AGAATTGCCCCTTTTGACCTTCTCCCTTAAAGAATTATTTACTGGATGTA
CATTTTATTTTTCATCAATAATAGATATGCTTATTTTATGATCAACCAAG
CACCAATAAGTTTTAATTGTTTTTGCAAAATCATTTTTTTGTAATTAACA
AACGAACGATAATGCGGACAATTAGATACTAATTTCAGGCACGGACAGGA
TTTCCTTGAACTGCTTTCGGCAATTAAGTTACCAAAAGTACAAACCAAAG
AAAAAACAAACATATTTTTAGCATGTTTTGATTAATTAAAGGTTAATTAC
TTTGGTTTTTAATTACCTCTGCTTTGTCAATAATGTTTTAATTTTGTGTT
ATAGTTTTAAAACTTCGAGGCTCAAACAAGGAAGTCTGAATTGATAGGAC
GCCATATTAATTGTTCAACTTAAAATCACTTACAAAATTTTTTTTGGAAT
TCTTTTTTAAACAGATTCTGCTGGTCAGTATATTACACATCGAAGCAAGA
CCCAAATTAACAGTCAGACAAATCATTCGTAAAAACATGGAACGAATCTG
GATGGACGGTTATGAGACTGGTAAAAAATCAAAAAAGAAAATGAAAATAT
ACGAACGCGACGTTTCACATCTAGTCACTGATGAAGATTTCAGTATTTGT
AGAGCTGGCAGACTTCTACCTGGAGTATATTGTCAACATTTAACTTACGA
AAATGGCTCCTTCATCGGAACAAATAGAGAGTTACGTGGGAATGAAGGTA
AATTTTAAGGATTTTCATAATACTCCGAGTACCTTTTTAGGATCAAAACC
AATGTTGTTCTAACACTATTATTCAAAGAATTGAATATATACAGTTCAAA
ATTTTTAAGAGCCATTCTGATAATACCTGAGAAAAGCGACGATAAAGGCA
ACACATGTTCAAGTCTGGTGACAGAAGGAATTCCAAGCTTTTTAATGACA
GTTACACATAGATCTTATGACAAATTGTGATAGAATTGATGATTGAGACA
TTAAAATCGTTAAAATTCATCACAGTTTTCAGAAATTTTAAATGCTTAAA
ATACCATTTAAAAGATAAAACTTTCATTTTGAACTAGTAGGGCTAGCCTT
TAGAAAAGAAAGCAAGATATAGTGACGTAATAGAATACATCCTTTAGACA
TAATTGGAATGTCTGCCTAATAGATGATACCTAGTAACCTTTGTTTACTT
TTTCCGTTCTCATGCTTTTTATAAGTCTACATAAGACATACAACAGGCAA
TGCCTCAGGGTTTCCTTCTTAAATACCAAATCAATAGAGTAAAGGATGTC
TATCAAAATTCAATACTGCTTTCTGAATTTGTTAATGACAAAACAAAACG
CTTAAAAATAACTAGCAGTTTCACTTGAAATATGTCCCTAAAAATTCAAC
AGCTATGATATAATATGATTATACCATTTAATTTAACCCTTCAAACCCAG
GAGACTTGCTTACACGTTAATCTGTCAATATATCAAGTCCTATAGCTCCT
GATCACTTGATTTAGAAGGGCATAAACCAATCAAAAAATGTTACGGTCTG
GAAAAGTTAAATATCATGAAGACCGCTAAATAAGTTGTTATTTCGTTTAT
TTCAGGTATATTTCAAATTGAGAGCTACGGTACTGGTATAGTTCGAATCA
AATACGTTCCAACTGGTCTTTACCTTATCATCAACGAGTTTGGAAGAATC
AATGCCACTAATGTAAGTATCTTAGAAGAATTTTCACGGTGAAACCTTTT
TACGTTTCCCAAGCTACTGTTTCAATAACATCTTAAAATGATTAATGTCA
GATTTTTGTGAAAACTGAATTCTCAGTATCTACATAATATTGAGATTGAG
GAATTTTTTGCAGCATCCTAAGTTATTGGACCTAAGTAAGAGTCTCGAAT
TAACCATAGTTTGTATGTTTTACAATTTTCAGGACAAATCAAATCTGGAG
ACGTTATTCTATAGCACGTTAGAAGAGATAACGTATTTAGAAACTTTTGC
ATCAGCTAAATACTACATGAGAGAAGAAAATGTTGAGGGTGCGCCGAATA
AAGATTTGTTAATTGGAGTCAAAGTAAAAGGTGACACGTGTAAAATCAAA
AATGCTAAGAATACGAAATCGGACAGTCGTAGCGATCAATTTTCCTTCCT
GCAAGAATCTGATCAAAGTTTTTATTGCAAAAGAGACCGGTAG Coding sequence (CDS) from alignment at sc0000043_pilon:1299030..1301322- >XLOC_039541 ID=XLOC_039541|Name=XLOC_039541|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1368bp|location=Sequence derived from alignment at sc0000043_pilon:1299030..1301322- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACCTTCACACTATCTTTGTTGTTTTAATTATGGACCTTCACACTAT
CTTTGTTGTTTTAATTATTCTGCTGGTCAGTATATTACACATCGAAGCAA
GACCCAAATTAACAGTCAGACAAATCATTCGTAAAAACATGGAACGAATC
TGGATGGACGGTTATGAGACTGGTAAAAAATCAAAAAAGAAAATGAAAAT
ATACGAACGCGACGTTTCACATCTAGTCACTGATGAAGATTTCAGTATTT
GTAGAGCTGGCAGACTTCTACCTGGAGTATATTGTCAACATTTAACTTAC
GAAAATGGCTCCTTCATCGGAACAAATAGAGAGTTACGTGGGAATGAAGA
TTCTGCTGGTCAGTATATTACACATCGAAGCAAGACCCAAATTAACAGTC
AGACAAATCATTCGTAAAAACATGGAACGAATCTGGATGGACGGTTATGA
GACTGGTAAAAAATCAAAAAAGAAAATGAAAATATACGAACGCGACGTTT
CACATCTAGTCACTGATGAAGATTTCAGTATTTGTAGAGCTGGCAGACTT
CTACCTGGAGTATATTGTCAACATTTAACTTACGAAAATGGCTCCTTCAT
CGGAACAAATAGAGAGTTACGTGGGAATGAAGGTATATTTCAAATTGAGA
GCTACGGTACTGGTATAGTTCGAATCAAATACGTTCCAACTGGTCTTTAC
CTTATCATCAACGAGTTTGGAAGAATCAATGCCACTAATGTATATTTCAA
ATTGAGAGCTACGGTACTGGTATAGTTCGAATCAAATACGTTCCAACTGG
TCTTTACCTTATCATCAACGAGTTTGGAAGAATCAATGCCACTAATGACA
AATCAAATCTGGAGACGTTATTCTATAGCACGTTAGAAGAGATAACGTAT
TTAGAAACTTTTGCATCAGCTAAATACTACATGAGAGAAGAAAATGTTGA
GGGTGCGCCGAATAAAGATTTGTTAATTGGAGTCAAAGTAAAAGGTGACA
CGTGTAAAATCAAAAATGCTAAGAATACGAAATCGGACAGTCGTAGCGAT
CAATTTTCCTTCCTGCAAGAATCTGATCAAAGTTTTTATTGCAAAAGAGA
CCGGTAGGACAAATCAAATCTGGAGACGTTATTCTATAGCACGTTAGAAG
AGATAACGTATTTAGAAACTTTTGCATCAGCTAAATACTACATGAGAGAA
GAAAATGTTGAGGGTGCGCCGAATAAAGATTTGTTAATTGGAGTCAAAGT
AAAAGGTGACACGTGTAAAATCAAAAATGCTAAGAATACGAAATCGGACA
GTCGTAGCGATCAATTTTCCTTCCTGCAAGAATCTGATCAAAGTTTTTAT
TGCAAAAGAGACCGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1299030..1301322 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 424-684:262 |
| Aaloc | 319-423:587 |
| Aaloc | 34-315:1730 |
| Aaloc | 1-33:2294 |
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