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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:676628..679366- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039527 ID=XLOC_039527|Name=XLOC_039527|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2739bp|location=Sequence derived from alignment at sc0000112_pilon:676628..679366- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTCTTACTGGTTGCCTTAGCCTTGGTGCATATAGCACTGTGTGT
GGAAGAGGATAAACTTCCTACCGCTGCAGACCTCCTAACAGAGGCAAAGC
GAACATGTGCAGATTTTATTGCTACCAGACCCAATGCTGTATGCTCGGAA
TATGGAGGTAATACACTGATCTTTAACTATTCAACTGGATTGGGCTTCCC
ATATAAAGGAAGCGTTTCCAGTTTTAGGGCTGACTTATCCACCATCTTGG
TCGCCAATAGTGATTTTCGAATATTTTCAAACTCAAAACGTTTGAGATTC
TAAGGTAAATTCTAACATGGCGGATAGTCAACTTCTAACTGGACACACTT
CCTCTGAAAATCTGTGAGCAGTTAGCTTTTGTAAAAATCAAAAATCAATC
CTTAGGAAAAACAAAATAAATAATAAAGTATCTATCGGCAGACACGTTCA
TCCTTCCCAGGACTCATTAGTGCGACTCGGGTAAGCGAGCACAGACTGTT
GTTATCACCAGAGTGCTCAGAGCACTAAGTGCTGAGCATCGCATATTCGC
TTGTGGTGAACGGTGAAGCAGATCTTGCTCCTCAACAGAGTCTATAGAGT
GCTCAAAGAACTGAAGTTCTGAGCGAAATCAGTTAACTAATAAAGTAAAC
AGATTTCTACATGTTTTCCGTAAAAATATTTCCAAAATGTTTTAAATTCT
TTAACATTTTTTCTTTTCCTTTCACAGAGGAAGCAAATAAAAAGACGGTA
TTTTTCGAAACTTTCGCTGTAGTAGAGGATGACATTACCATGCCTGCAGG
AACAGGATTCGATATAGCGCAAGCAGAATGTAATGCAAACGGAGGTTTCC
TCGCTACTTTCAATAGTAATGAACAACTTGCGGAAATTACAACGATGGGT
GGTATTCCGGATCTTGAGTAAGTACCCAGTTTATGTATCGGAGGAAATCG
AGGGCGACGGTAAGTGAAATCGATACAAAACAAAAGTCGATAGTTGATGT
ACGGCTCTATATCGCCTTTGCTCGCCTAAACAGACGACGGTATTTTGGTG
TTTTTACCGTCGTCGAGCAAAGTGGACGGTGATTTTGGAGACATGTCAAC
CTTGCTTTATACCGTCCCCCTCCATATATATCGAAAACACAAAATCGCTA
GTAATCTTTTGAAGTGCCCTGGCATAAAGGTAGAATACAAAGATCTGTAA
AGCCCGAAAGGCTAGCCCAGTCCTTTTTTCTTACCTATATACAATAAAAA
AAGGTGTCAAAAAGGATTGAGTTTAGGGGGATAATTAAGTAATAAAGTGG
CACGCACCTGACTGCGCAACTACGGGCGAAAAGGTGTATTTATATTTTGA
AATTCTGTTTAACATTACTTATGTTCTGTTTTGCTCAGTGATGGAGACTC
GGCCGTCATAATCATTGGTATTAAAGATGTAAGCGGTCAAGGCACCTGGC
AAAATTTCGACATGATCAAGACTGCAGTACCATCAGATTTGGCTGTTGAT
GCCGTAATGGATCAGGAGTGTTTAGCTATCAAAATCGCAGGGGTTACCGC
AACCCTTGACACTGACGGAGTTGATACGACTCCAGATACTATCACTTATG
AAACAATTGCTTGTCCTCAAGATGCCGCAACAACTCATTACATGTGCCGC
TTTAACTACATTTCTAATTCCATTATTTACATTGATGAAGCTAGACAATG
GTCTGATGCCATGGTCAAGTGCCAAGAAATTGGTGGTGATTTATTTAGTA
TGAAGAACGCTGAAGAAAAAATGGCCCTTAACTGTCTCTTAAATGAAAGG
TAAACAAATCATATTGATAGAAACAGCCCTGTCTCACTGCCCCAGTGGAA
CTTTTTCCATTTCTATTGAAATCTCAATGGAAGCGGGTCTGTGTTACAGG
GGTATATATAATATAATGTTATATCCTCACATTGTTATATCAGCCCTCGG
GGGGGGGGGGGCAGTGGCTTTACCAACTGACGGTATGTGCGGCGAAAAAA
ATGGCTTTTAGAATCGCACCCTTACAGTGCAGAAAAAAATCGCTGAAATT
CATACCCTTACAGTGCATTTTTTCAAATTTTAAACTCTTTTAGAGAAACA
AAATCAAGATTTTTCCTAGATTTGAAAGCATGTATTTATTTCGTATTTTA
CTTTTCTGACAGAGTGAAACATACGGCATGGATTGGTTTGAATGATCTGA
ATCATGAAGGTGAATTCACTTGGTCAGATTACAGCATCTCCAAATACACG
CCATTCTGTACAAAACCAGCACCAGATGCTTTAGATAAAGATTGCGTCAT
GTTCCAATCAAACACTGTTAAACCACACGATCACGCAAACAAAGCAGGAT
GTATTCAAGATGGCGACTGTTCCATGAATTTACCATACGTTTGTAAAATC
CGTGACCCAGAATCTGATGTTCATTCAGTCTTATTCAAAGAATATTTGGT
TCATCTTTTGAAAGACGTCGTCTCAGCTGAAGGTGTCTGTGGAAGAACTT
GTGGTAACGGCATCGGAAGCATGTTTGGTGGACACAAAAGCTCAGGTCTT
ATTCCACGCAAGAAGATCAGAGTTGTCCGCAAAGGTGGAAGAAAACGTCA
AACCAAACAACGTCGATCCAAACACAAGATCTTACCAAGACATAAGAAGG
CAAACAATGTGGTCAAAAGACCATCTAGTGGTAGTGGTTCACTTGCTACA
TCACACAGCCTCTTAAGCCGACTTGGAATCCACACCTAA Coding sequence (CDS) from alignment at sc0000112_pilon:676628..679366- >XLOC_039527 ID=XLOC_039527|Name=XLOC_039527|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2670bp|location=Sequence derived from alignment at sc0000112_pilon:676628..679366- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTCTTACTGGTTGCCTTAGCCTTGGTGCATATAGCACTGTGTGT
GGAAGAGGATAAACTTCCTACCGCTGCAGACCTCCTAACAGAGGCAAAGC
GAACATGTGCAGATTTTATTGCTACCAGACCCAATGCTGTATGCTCGGAA
TATGGAGATGAAGCTCTTACTGGTTGCCTTAGCCTTGGTGCATATAGCAC
TGTGTGTGGAAGAGGATAAACTTCCTACCGCTGCAGACCTCCTAACAGAG
GCAAAGCGAACATGTGCAGATTTTATTGCTACCAGACCCAATGCTGTATG
CTCGGAATATGGAGAGGAAGCAAATAAAAAGACGGTATTTTTCGAAACTT
TCGCTGTAGTAGAGGATGACATTACCATGCCTGCAGGAACAGGATTCGAT
ATAGCGCAAGCAGAATGTAATGCAAACGGAGGTTTCCTCGCTACTTTCAA
TAGTAATGAACAACTTGCGGAAATTACAACGATGGGTGGTATTCCGGATC
TTGAAGGAAGCAAATAAAAAGACGGTATTTTTCGAAACTTTCGCTGTAGT
AGAGGATGACATTACCATGCCTGCAGGAACAGGATTCGATATAGCGCAAG
CAGAATGTAATGCAAACGGAGGTTTCCTCGCTACTTTCAATAGTAATGAA
CAACTTGCGGAAATTACAACGATGGGTGGTATTCCGGATCTTGATGATGG
AGACTCGGCCGTCATAATCATTGGTATTAAAGATGTAAGCGGTCAAGGCA
CCTGGCAAAATTTCGACATGATCAAGACTGCAGTACCATCAGATTTGGCT
GTTGATGCCGTAATGGATCAGGAGTGTTTAGCTATCAAAATCGCAGGGGT
TACCGCAACCCTTGACACTGACGGAGTTGATACGACTCCAGATACTATCA
CTTATGAAACAATTGCTTGTCCTCAAGATGCCGCAACAACTCATTACATG
TGCCGCTTTAACTACATTTCTAATTCCATTATTTACATTGATGAAGCTAG
ACAATGGTCTGATGCCATGGTCAAGTGCCAAGAAATTGGTGGTGATTTAT
TTAGTATGAAGAACGCTGAAGAAAAAATGGCCCTTAACTGTCTCTTAAAT
GAAAGTGATGGAGACTCGGCCGTCATAATCATTGGTATTAAAGATGTAAG
CGGTCAAGGCACCTGGCAAAATTTCGACATGATCAAGACTGCAGTACCAT
CAGATTTGGCTGTTGATGCCGTAATGGATCAGGAGTGTTTAGCTATCAAA
ATCGCAGGGGTTACCGCAACCCTTGACACTGACGGAGTTGATACGACTCC
AGATACTATCACTTATGAAACAATTGCTTGTCCTCAAGATGCCGCAACAA
CTCATTACATGTGCCGCTTTAACTACATTTCTAATTCCATTATTTACATT
GATGAAGCTAGACAATGGTCTGATGCCATGGTCAAGTGCCAAGAAATTGG
TGGTGATTTATTTAGTATGAAGAACGCTGAAGAAAAAATGGCCCTTAACT
GTCTCTTAAATGAAAGAGTGAAACATACGGCATGGATTGGTTTGAATGAT
CTGAATCATGAAGGTGAATTCACTTGGTCAGATTACAGCATCTCCAAATA
CACGCCATTCTGTACAAAACCAGCACCAGATGCTTTAGATAAAGATTGCG
TCATGTTCCAATCAAACACTGTTAAACCACACGATCACGCAAACAAAGCA
GGATGTATTCAAGATGGCGACTGTTCCATGAATTTACCATACGTTTGTAA
AATCCGTGACCCAGAATCTGATGTTCATTCAGTCTTATTCAAAGAATATT
TGGTTCATCTTTTGAAAGACGTCGTCTCAGCTGAAGGTGTCTGTGGAAGA
ACTTGTGGTAACGGCATCGGAAGCATGTTTGGTGGACACAAAAGCTCAGG
TCTTATTCCACGCAAGAAGATCAGAGTTGTCCGCAAAGGTGGAAGAAAAC
GTCAAACCAAACAACGTCGATCCAAACACAAGATCTTACCAAGACATAAG
AAGGCAAACAATGTGGTCAAAAGACCATCTAGTGGTAGTGGTTCACTTGC
TACATCACACAGCCTCTTAAGCCGACTTGGAATCCACACCTAAAGTGAAA
CATACGGCATGGATTGGTTTGAATGATCTGAATCATGAAGGTGAATTCAC
TTGGTCAGATTACAGCATCTCCAAATACACGCCATTCTGTACAAAACCAG
CACCAGATGCTTTAGATAAAGATTGCGTCATGTTCCAATCAAACACTGTT
AAACCACACGATCACGCAAACAAAGCAGGATGTATTCAAGATGGCGACTG
TTCCATGAATTTACCATACGTTTGTAAAATCCGTGACCCAGAATCTGATG
TTCATTCAGTCTTATTCAAAGAATATTTGGTTCATCTTTTGAAAGACGTC
GTCTCAGCTGAAGGTGTCTGTGGAAGAACTTGTGGTAACGGCATCGGAAG
CATGTTTGGTGGACACAAAAGCTCAGGTCTTATTCCACGCAAGAAGATCA
GAGTTGTCCGCAAAGGTGGAAGAAAACGTCAAACCAAACAACGTCGATCC
AAACACAAGATCTTACCAAGACATAAGAAGGCAAACAATGTGGTCAAAAG
ACCATCTAGTGGTAGTGGTTCACTTGCTACATCACACAGCCTCTTAAGCC
GACTTGGAATCCACACCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:676628..679366 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1123-1332:211 |
| Aaloc | 760-1122:577 |
| Aaloc | 349-756:1351 |
| Aaloc | 160-345:2011 |
| Aaloc | 1-156:2740 |
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