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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000372_pilon:250261..253188+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039442 ID=XLOC_039442|Name=XLOC_039442|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2928bp|location=Sequence derived from alignment at sc0000372_pilon:250261..253188+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGTACAACGGTTGGATCTCAGACAGAGAAGCTATTGAAAGTGAATGTGG
TATAGAAAGTGTGTTAAATAATTTCTCCTCTGGTGTTGGTCGAGATGTCA
CTGTTTCAATTATCAAGAGTCTGGTTCACCAGAAAAGTGCTTCCAAAGAA
TTATTCAATTCTGAAAAGGACCTTGAGTGGACTATGGATGTCATTTGTTT
TGGTTTAACAATGCCACTGACAGATATGGAACTTGAAACAATCAAGAATT
GTGTTTATCTCTACTTAGACTGGTCTAGCGTTTTCTCTTCAAAACCGAAA
CCAGGCATTCCGTGCCAAATAGTGCGCAATAAAGAACACTATTTCGCACA
AATGTTGAAACATCTTACAAACATGTTCATACCAAGAGAAAGCTCAACAA
CAAATTACCAGAATAATTTCTGTAGTCGTATTTTATCTGACATCAAAACT
TTGGTCCAGGAAGGCAATATGGGAAAGTCATCATCAGAGGATGTCTTGCG
ATTCTATTTAGGAATATCAGGACGTTTACTCTCTCAGCCACCTATGAAAG
GTGGACTAGCAGACATGCTTTGTGAACAGTTGATAAACTCTTTGATCACA
GTTTGGTTACATGTTTCTTGTTATTATTTTCCATCGCCCACCCTCTGGTG
TACATTACAAGAGGAATTCCAGACTTGGAGACACAACCATATCTTGATTT
TACAATGGAATAAACTTACCTACGTTCTTACACGGAAAGTTTTAGCTATA
ATCTTTGGGCCTTCTTATCCACTACCTTCATTATACAAAAATGATCAAAC
TGAAGACATAAAATTACCTCTAAACATGTCAGATGATATTGTTGTTCAAT
GCTGGTTTCGTTTTCTTCACTGTATGGGAAATCCAGTAGACTTAACAAAT
AAAATCATCATCGCAAATACACCTAACTTTGCAATGTATGGTTTGGAACA
CAACCAAGATCCCGCATCACATCCCTCTTTGAAGAGCCTACCTCAGAGCT
TTCTGAAAGCTATGCAAGGTGTTTCAGTACTGGTGAAAATGTTCCTTGGT
GCCTCTATACAAGATACACGATCCACATCTATTCTTTCTCAATCATTTCG
AGGTGATCGGAAATCAGCAACTCTTGGTCCAACAGAATCTCATATAGCTG
CAGTGTTTGCAAACAAAGCTGCTACTGTACCTGGTAAGTGTTTTCAATTC
Aatatgattgattgatttatttatttatctttctcataaaaggttctttt
cttttttatgaaaagctttatttcccatttccttttttttagattagaat
ttttttagttttacctgaaattttgtttagGTGTTAGAAGAATAGCTGAT
CAATCCTCAGCAAAGACAGTCCGTGATGACAGCAACATCACGCCTAAAAC
AATGAATGCCATAGCTGCTGAATCCAACTGTATTCTTCACTTGTTTGGTG
GTTGGTTGTTTGATGTATGTCTGTCAGGAGTTGAACTTTCCAAGGTATTG
GCTTCTGTTGGTGTCATCAGCTGTGGAATTAAACCCCAATCGTATCACCT
GAGTAGTGAAGATATTGAAGCCGGGAGAAGgtgagttttgatttttaaag
tatattttttaacttaattttttgccttaacttttctatacttctttaaA
ACAGCATCAAAAACAAATAACAagctatttcttttttatgcaaatTATAG
CTTAGAAATGTATGGCTAACATCAAGAATGGCATCAAGATCATTTACATC
ATTTATTCTATAAACGTTATTCTATcttactttaaatttgaaagtcttaa
tttaagacttttttgtcttttttacaGCTTACCACCTGTTATTAAAAACG
CGTTCGAACCAGGAAGAGCAGAAGCCTTCGGTACACTAtgtcaaatattt
tgtcatGCTAATGTCAATGGACAAGCCATATTACCTGTCTATCTGTCAAG
ATTTTATTTGACACTTGCTGTTGGTCTCTGCTATGGAGAGGTATTGCTCC
TCGTTTgtcttttatataaaaagcaTAATTTTAAAACGAACGGCTGTTTA
ACTCCCCATTAATTCACTTAAGTATCTACAACAACATATATATTAACACT
TGCTACTGATCTTTGCTATAGAAAggtatttttcctcttttatgTAAAAC
GTAAACATTTGTTTAACTTTCCTTTAAATGTTAGTATTTCAATTGCTTAA
ACAACTACCGGGTGACCagagtttggagggtaactCCATATTTAAGTTAG
TTAGTGGGTCGCCCGGTACATCTAATTAAGATCAATGAGCACTTGTTTAC
TATTATTTGGATTACTCATTCTTTATATTATGCCTAATACTTCTTAATCT
TTAGCTGAAGCTCTTTCTTCATTTTAGACAAAAGCTGGACAGGTGCTTGG
AgagattttgttgaatattaCAGATATTTTGAGAATTGATTTACATGGCG
TTCAAGTTCTTATCCCAAACATTTTACAAGCTATTGAGCTCATCCTGCCG
TCAAGTGATATTTCTCTCGGGTAATcaatttatcaataaaaatcTTCATT
CTTGATATCGTGATTTATAATACTGTGTTAGtgatttgttatttttatcA
AGCTTAAGTAGAAGAAAACAAACGCATCTTACTTTCTTGGTGCAATAAAA
ATGGTCTTAGAAGCATACTGGACTGTTTGtcttttaaaatatctttttat
aaaTTCTCAAGCAACAAAATGTTAGTTTTGTCCAAAATACTTTTCGATTA
TAATATATGAATGAAATGATTAGCAAGCCTTTTTCAAAAGATATATGTTT
CGCATAATACTTTTCTCCTACTCTTTAGGTATGACTTATCACTGGTCATG
CTGCGACGCTCCTGCATTCACATTCTACTCTCAATGCTTTGTTTACCATT
GCATTTTCTTCAGCTGCCAATTCAAGGT Coding sequence (CDS) from alignment at sc0000372_pilon:250261..253188+ >XLOC_039442 ID=XLOC_039442|Name=XLOC_039442|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3678bp|location=Sequence derived from alignment at sc0000372_pilon:250261..253188+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGTACAACGGTTGGATCTCAGACAGAGAAGCTATTGAAAGTGAATGTGG
TATAGAAAGTGTGTTAAATAATTTCTCCTCTGGTGTTGGTCGAGATGTCA
CTGTTTCAATTATCAAGAGTCTGGTTCACCAGAAAAGTGCTTCCAAAGAA
TTATTCAATTCTGAAAAGGACCTTGAGTGGACTATGGATGTCATTTGTTT
TGGTTTAACAATGCCACTGACAGATATGGAACTTGAAACAATCAAGAATT
GTGTTTATCTCTACTTAGACTGGTCTAGCGTTTTCTCTTCAAAACCGAAA
CCAGGCATTCCGTGCCAAATAGTGCGCAATAAAGAACACTATTTCGCACA
AATGTTGAAACATCTTACAAACATGTTCATACCAAGAGAAAGCTCAACAA
CAAATTACCAGAATAATTTCTGTAGTCGTATTTTATCTGACATCAAAACT
TTGGTCCAGGAAGGCAATATGGGAAAGTCATCATCAGAGGATGTCTTGCG
ATTCTATTTAGGAATATCAGGACGTTTACTCTCTCAGCCACCTATGAAAG
GTGGACTAGCAGACATGCTTTGTGAACAGTTGATAAACTCTTTGATCACA
GTTTGGTTACATGTTTCTTGTTATTATTTTCCATCGCCCACCCTCTGGTG
TACATTACAAGAGGAATTCCAGACTTGGAGACACAACCATATCTTGATTT
TACAATGGAATAAACTTACCTACGTTCTTACACGGAAAGTTTTAGCTATA
ATCTTTGGGCCTTCTTATCCACTACCTTCATTATACAAAAATGATCAAAC
TGAAGACATAAAATTACCTCTAAACATGTCAGATGATATTGTTGTTCAAT
GCTGGTTTCGTTTTCTTCACTGTATGGGAAATCCAGTAGACTTAACAAAT
AAAATCATCATCGCAAATACACCTAACTTTGCAATGTATGGTTTGGAACA
CAACCAAGATCCCGCATCACATCCCTCTTTGAAGAGCCTACCTCAGAGCT
TTCTGAAAGCTATGCAAGGTGTTTCAGTACTGGTGAAAATGTTCCTTGGT
GCCTCTATACAAGATACACGATCCACATCTATTCTTTCTCAATCATTTCG
AGGTGATCGGAAATCAGCAACTCTTGGTCCAACAGAATCTCATATAGCTG
CAGTGTTTGCAAACAAAGCTGCTACTGTACCTGaTGTACAACGGTTGGAT
CTCAGACAGAGAAGCTATTGAAAGTGAATGTGGTATAGAAAGTGTGTTAA
ATAATTTCTCCTCTGGTGTTGGTCGAGATGTCACTGTTTCAATTATCAAG
AGTCTGGTTCACCAGAAAAGTGCTTCCAAAGAATTATTCAATTCTGAAAA
GGACCTTGAGTGGACTATGGATGTCATTTGTTTTGGTTTAACAATGCCAC
TGACAGATATGGAACTTGAAACAATCAAGAATTGTGTTTATCTCTACTTA
GACTGGTCTAGCGTTTTCTCTTCAAAACCGAAACCAGGCATTCCGTGCCA
AATAGTGCGCAATAAAGAACACTATTTCGCACAAATGTTGAAACATCTTA
CAAACATGTTCATACCAAGAGAAAGCTCAACAACAAATTACCAGAATAAT
TTCTGTAGTCGTATTTTATCTGACATCAAAACTTTGGTCCAGGAAGGCAA
TATGGGAAAGTCATCATCAGAGGATGTCTTGCGATTCTATTTAGGAATAT
CAGGACGTTTACTCTCTCAGCCACCTATGAAAGGTGGACTAGCAGACATG
CTTTGTGAACAGTTGATAAACTCTTTGATCACAGTTTGGTTACATGTTTC
TTGTTATTATTTTCCATCGCCCACCCTCTGGTGTACATTACAAGAGGAAT
TCCAGACTTGGAGACACAACCATATCTTGATTTTACAATGGAATAAACTT
ACCTACGTTCTTACACGGAAAGTTTTAGCTATAATCTTTGGGCCTTCTTA
TCCACTACCTTCATTATACAAAAATGATCAAACTGAAGACATAAAATTAC
CTCTAAACATGTCAGATGATATTGTTGTTCAATGCTGGTTTCGTTTTCTT
CACTGTATGGGAAATCCAGTAGACTTAACAAATAAAATCATCATCGCAAA
TACACCTAACTTTGCAATGTATGGTTTGGAACACAACCAAGATCCCGCAT
CACATCCCTCTTTGAAGAGCCTACCTCAGAGCTTTCTGAAAGCTATGCAA
GGTGTTTCAGTACTGGTGAAAATGTTCCTTGGTGCCTCTATACAAGATAC
ACGATCCACATCTATTCTTTCTCAATCATTTCGAGGTGATCGGAAATCAG
CAACTCTTGGTCCAACAGAATCTCATATAGCTGCAGTGTTTGCAAACAAA
GCTGCTACTGTACCTGGTGTTAGAAGAATAGCTGATCAATCCTCAGCAAA
GACAGTCCGTGATGACAGCAACATCACGCCTAAAACAATGAATGCCATAG
CTGCTGAATCCAACTGTATTCTTCACTTGTTTGGTGGTTGGTTGTTTGAT
GTATGTCTGTCAGGAGTTGAACTTTCCAAGGTATTGGCTTCTGTTGGTGT
CATCAGCTGTGGAATTAAACCCCAATCGTATCACCTGAGTAGTGAAGATA
TTGAAGCCGGGAGAAGGTGTTAGAAGAATAGCTGATCAATCCTCAGCAAA
GACAGTCCGTGATGACAGCAACATCACGCCTAAAACAATGAATGCCATAG
CTGCTGAATCCAACTGTATTCTTCACTTGTTTGGTGGTTGGTTGTTTGAT
GTATGTCTGTCAGGAGTTGAACTTTCCAAGGTATTGGCTTCTGTTGGTGT
CATCAGCTGTGGAATTAAACCCCAATCGTATCACCTGAGTAGTGAAGATA
TTGAAGCCGGGAGAAGCTTACCACCTGTTATTAAAAACGCGTTCGAACCA
GGAAGAGCAGAAGCCTTCGGTACACTAtgtcaaatattttgtcatGCTAA
TGTCAATGGACAAGCCATATTACCTGTCTATCTGTCAAGATTTTATTTGA
CACTTGCTGTTGGTCTCTGCTATGGAGAGCTTACCACCTGTTATTAAAAA
CGCGTTCGAACCAGGAAGAGCAGAAGCCTTCGGTACACTAtgtcaaatat
tttgtcatGCTAATGTCAATGGACAAGCCATATTACCTGTCTATCTGTCA
AGATTTTATTTGACACTTGCTGTTGGTCTCTGCTATGGAGAGACAAAAGC
TGGACAGGTGCTTGGAgagattttgttgaatattaCAGATATTTTGAGAA
TTGATTTACATGGCGTTCAAGTTCTTATCCCAAACATTTTACAAGCTATT
GAGCTCATCCTGCCGTCAAGTGATATTTCTCTCGGACAAAAGCTGGACAG
GTGCTTGGAgagattttgttgaatattaCAGATATTTTGAGAATTGATTT
ACATGGCGTTCAAGTTCTTATCCCAAACATTTTACAAGCTATTGAGCTCA
TCCTGCCGTCAAGTGATATTTCTCTCGGGTATGACTTATCACTGGTCATG
CTGCGACGCTCCTGCATTCACATTCTACTCTCAATGCTTTGTTTACCATT
GCATTTTCTTCAGCTGCCAATTCAAGGTGTATGACTTATCACTGGTCATG
CTGCGACGCTCCTGCATTCACATTCTACTCTCAATGCTTTGTTTACCATT
GCATTTTCTTCAGCTGCCAATTCAAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000372_pilon | genome | sc0000372_pilon:250261..253188 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1741-1839:2830 |
| Aaloc | 1597-1737:2378 |
| Aaloc | 1435-1596:1829 |
| Aaloc | 1186-1431:1333 |
| Aaloc | 1-1182:1 |
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