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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000506_pilon:61762..63771- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039394 ID=XLOC_039394|Name=XLOC_039394|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2010bp|location=Sequence derived from alignment at sc0000506_pilon:61762..63771- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGATCCATTTACAGCAGCTTTGAAACTACTTGGTAGCCATGCTAA
ACTTGACAGAGATAAAGGAGCTTTAAGTTTCAAAGTTGCTTTACAAAAGA
ATAAAATAAATACAGAATCATCAAAGGAAGAGTTTCAGAAGTTACAAAAT
TATTTGTTGGCATATCTTCAGTCAGATGAACGGAATGGATCAACATGGGA
AGAGATCTTTGGTCATTTAGAGGCATCACGGATTTTAATTGAGTCAATTG
GAGATGACAGTTCTGGTATCAACGTTGACACTTTTCTAACAATTGGTCTC
GCTCATTTGGAAAATCCAGAATTCAGGGTTCGTATAGTTGCTGGTGATTT
ATTAGGGGCCCTTTGTAACCGAATTGATTCTAACATTTACCGAAAATGTG
AACCTAAGTTGATCGCTAGTATCAAGGAGAACTTGACTAGAGACATTCCT
GGGGACAATGTTAAAAATGGAGATGATCATAAAGATGCCAAAGATATCTT
TCATGATACAGCTGGATGGAAGTCTTTGGAAACCAGTATGAAAGGTTTAC
AATCCATTATTGAAGGTTGTGGTGAACATTTTCTTCAATTCGTTAATATG
GATCTGCTTGATTTGATTTTTGATACATTGAGTCACACCAATCGATTTGT
TCGGGAAACTGGTTATTATCTATGCGCCTCACTGGCACGATACGGTGTGT
CTTCAAAAGATGGATCAAAGAATGACGTAGCTGGGAAACTTGCTCAACAT
CTTTATGTTGGACTGGCTGATAATTGGAGTCAAGTCAGACTTGCTGCGTC
TGTTGCAACGCGTCAGTTCTTTGAGGGTTTTGAAGATGAAGATAAAAAAT
TATATTTCAAAACTCTTTTGCCACCTATGTGTTTGAATCGCTACTATTTA
GCTGAAGGTGTCAAGCTTTACAACCAAGAATCCTGGAAGTTGATCATGGG
AACCCAGGGTCGTGCCAATGTTGCTTTATTTATCACAGAAATTGTTGATT
TTTATGTGAAACAGACAGAGAGTGACAATCATGCGGTACGTGAAGCAGCA
TGTCATTGTATGGCGGAATTGAGCTCAAAAATTGATAACGAGGTAGTCAA
ACCACATGTTCCACGACTTCTTGAAGCACTTCACTTTTGTTTTCAAGATG
AGAGTTGGCCAGTTCGAGATACAGCTTGTGTTGCTTGTGGTAATTTCATC
TTGAACTTTCCAGATGAGAGCAAATCCTTACTCAGCACTTTCTACCCACT
GTTCTTCCACAATCTCCACGATCCTATCCCATCAGTTCGCCAGGGAGGGG
CTGTCGCTTTGACCAATGTCGCCAAAGCTTATGGTGAAGAAGCTCTTGAG
TATGTCTTCAATCAAGTCTCAAAAGACTTTGACGGTATCAAGGAGCAAAA
ATCTAGCTCTGAGAGATATGAGGGCTTGGATAAAGGCGTTGCGACGTATG
GTGTTATCAAACAACTAAGAGATAATGATTTAGAACTACATTCCAACCAG
CAAATGTATTCTTGTGGTTCACTGGCACCAAAAATGGGGCGTCGTGGTGG
TGGTTGTATGGATCATTCATTCAAACGAGCTGCAGAACCATGGGAAGCTG
TCGATGGTTGTGTTTATTTGCTCAGTGAGATGTCAAGTGTTCCTGCTGCC
GTACCCAGGGTGGAGAAATACATTCCTATCATGATCCAAGCAGCAACTCA
TAAGCACTACACCCACTACTTGCATCTCCTTGAATCCATCAACAAAGTCA
TCCCAAATATCGCCAAAGGATTGACCAAACGTGTTTTCAAGAAATATCTG
GAACAGTTCTTTGATCTCATTTTTGAGTCAGCAACATGTGACAGTGCATT
AACTAAAAGTGCTGCTTTTGATTGTCTCGAGTTTCTCAGCCAGTTTCTTG
GTCCAAGTATCTTGAAAGGTCGAATTGAGCAATATAATCCACATCACTTG
AAGGTGCTTGATCAAGTTTCAATTGGACCTGGTAGTATGCAAGGAACTGT
GTTTAGATAA Coding sequence (CDS) from alignment at sc0000506_pilon:61762..63771- >XLOC_039394 ID=XLOC_039394|Name=XLOC_039394|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4020bp|location=Sequence derived from alignment at sc0000506_pilon:61762..63771- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGATCCATTTACAGCAGCTTTGAAACTACTTGGTAGCCATGCTAA
ACTTGACAGAGATAAAGGAGCTTTAAGTTTCAAAGTTGCTTTACAAAAGA
ATAAAATAAATACAGAATCATCAAAGGAAGAGTTTCAGAAGTTACAAAAT
TATTTGTTGGCATATCTTCAGTCAGATGAACGGAATGGATCAACATGGGA
AGAGATCTTTGGTCATTTAGAGGCATCACGGATTTTAATTGAGTCAATTG
GAGATGACAGTTCTGGTATCAACGTTGACACTTTTCTAACAATTGGTCTC
GCTCATTTGGAAAATCCAGAATTCAGGGTTCGTATAGTTGCTGGTGATTT
ATTAGGGGCCCTTTGTAACCGAATTGATTCTAACATTTACCGAAAATGTG
AACCTAAGTTGATCGCTAGTATCAAGGAGAACTTGACTAGAGACATTCCT
GGGGACAATGTTAAAAATGGAGATGATCATAAAGATGCCAAAGATATCTT
TCATGATACAGCTGGATGGAAGTCTTTGGAAACCAGTATGAAAGGTTTAC
AATCCATTATTGAAGGTTGTGGTGAACATTTTCTTCAATTCGTTAATATG
GATCTGCTTGATTTGATTTTTGATACATTGAGTCACACCAATCGATTTGT
TCGGGAAACTGGTTATTATCTATGCGCCTCACTGGCACGATACGGTGTGT
CTTCAAAAGATGGATCAAAGAATGACGTAGCTGGGAAACTTGCTCAACAT
CTTTATGTTGGACTGGCTGATAATTGGAGTCAAGTCAGACTTGCTGCGTC
TGTTGCAACGCGTCAGTTCTTTGAGGGTTTTGAAGATGAAGATAAAAAAT
TATATTTCAAAACTCTTTTGCCACCTATGTGTTTGAATCGCTACTATTTA
GCTGAAGGTGTCAAGCTTTACAACCAAGAATCCTGGAAGTTGATCATGGG
AACCCAGGGTCGTGCCAATGTTGCTTTATTTATCACAGAAATTGTTGATT
TTTATGTGAAACAGACAGAGAGTGACAATCATGCGGTACGTGAAGCAGCA
TGTCATTGTATGGCGGAATTGAGCTCAAAAATTGATAACGAGGTAGTCAA
ACCACATGTTCCACGACTTCTTGAAGCACTTCACTTTTGTTTTCAAGATG
AGAGTTGGCCAGTTCGAGATACAGCTTGTGTTGCTTGTGGTAATTTCATC
TTGAACTTTCCAGATGAGAGCAAATCCTTACTCAGCACTTTCTACCCACT
GTTCTTCCACAATCTCCACGATCCTATCCCATCAGTTCGCCAGGGAGGGG
CTGTCGCTTTGACCAATGTCGCCAAAGCTTATGGTGAAGAAGCTCTTGAG
TATGTCTTCAATCAAGTCTCAAAAGACTTTGACGGTATCAAGGAGCAAAA
ATCTAGCTCTGAGAGATATGAGGGCTTGGATAAAGGCGTTGCGACGTATG
GTGTTATCAAACAACTAAGAGATAATGATTTAGAACTACATTCCAACCAG
CAAATGTATTCTTGTGGTTCACTGGCACCAAAAATGGGGCGTCGTGGTGG
TGGTTGTATGGATCATTCATTCAAACGAGCTGCAGAACCATGGGAAGCTG
TCGATGGTTGTGTTTATTTGCTCAGTGAGATGTCAAGTGTTCCTGCTGCC
GTACCCAGGGTGGAGAAATACATTCCTATCATGATCCAAGCAGCAACTCA
TAAGCACTACACCCACTACTTGCATCTCCTTGAATCCATCAACAAAGTCA
TCCCAAATATCGCCAAAGGATTGACCAAACGTGTTTTCAAGAAATATCTG
GAACAGTTCTTTGATCTCATTTTTGAGTCAGCAACATGTGACAGTGCATT
AACTAAAAGTGCTGCTTTTGATTGTCTCGAGTTTCTCAGCCAGTTTCTTG
GTCCAAGTATCTTGAAAGGTCGAATTGAGCAATATAATCCACATCACTTG
AAGGTGCTTGATCAAGTTTCAATTGGACCTGGTAGTATGCAAGGAACTGT
GTTTAGATAAATGACTGATCCATTTACAGCAGCTTTGAAACTACTTGGTA
GCCATGCTAAACTTGACAGAGATAAAGGAGCTTTAAGTTTCAAAGTTGCT
TTACAAAAGAATAAAATAAATACAGAATCATCAAAGGAAGAGTTTCAGAA
GTTACAAAATTATTTGTTGGCATATCTTCAGTCAGATGAACGGAATGGAT
CAACATGGGAAGAGATCTTTGGTCATTTAGAGGCATCACGGATTTTAATT
GAGTCAATTGGAGATGACAGTTCTGGTATCAACGTTGACACTTTTCTAAC
AATTGGTCTCGCTCATTTGGAAAATCCAGAATTCAGGGTTCGTATAGTTG
CTGGTGATTTATTAGGGGCCCTTTGTAACCGAATTGATTCTAACATTTAC
CGAAAATGTGAACCTAAGTTGATCGCTAGTATCAAGGAGAACTTGACTAG
AGACATTCCTGGGGACAATGTTAAAAATGGAGATGATCATAAAGATGCCA
AAGATATCTTTCATGATACAGCTGGATGGAAGTCTTTGGAAACCAGTATG
AAAGGTTTACAATCCATTATTGAAGGTTGTGGTGAACATTTTCTTCAATT
CGTTAATATGGATCTGCTTGATTTGATTTTTGATACATTGAGTCACACCA
ATCGATTTGTTCGGGAAACTGGTTATTATCTATGCGCCTCACTGGCACGA
TACGGTGTGTCTTCAAAAGATGGATCAAAGAATGACGTAGCTGGGAAACT
TGCTCAACATCTTTATGTTGGACTGGCTGATAATTGGAGTCAAGTCAGAC
TTGCTGCGTCTGTTGCAACGCGTCAGTTCTTTGAGGGTTTTGAAGATGAA
GATAAAAAATTATATTTCAAAACTCTTTTGCCACCTATGTGTTTGAATCG
CTACTATTTAGCTGAAGGTGTCAAGCTTTACAACCAAGAATCCTGGAAGT
TGATCATGGGAACCCAGGGTCGTGCCAATGTTGCTTTATTTATCACAGAA
ATTGTTGATTTTTATGTGAAACAGACAGAGAGTGACAATCATGCGGTACG
TGAAGCAGCATGTCATTGTATGGCGGAATTGAGCTCAAAAATTGATAACG
AGGTAGTCAAACCACATGTTCCACGACTTCTTGAAGCACTTCACTTTTGT
TTTCAAGATGAGAGTTGGCCAGTTCGAGATACAGCTTGTGTTGCTTGTGG
TAATTTCATCTTGAACTTTCCAGATGAGAGCAAATCCTTACTCAGCACTT
TCTACCCACTGTTCTTCCACAATCTCCACGATCCTATCCCATCAGTTCGC
CAGGGAGGGGCTGTCGCTTTGACCAATGTCGCCAAAGCTTATGGTGAAGA
AGCTCTTGAGTATGTCTTCAATCAAGTCTCAAAAGACTTTGACGGTATCA
AGGAGCAAAAATCTAGCTCTGAGAGATATGAGGGCTTGGATAAAGGCGTT
GCGACGTATGGTGTTATCAAACAACTAAGAGATAATGATTTAGAACTACA
TTCCAACCAGCAAATGTATTCTTGTGGTTCACTGGCACCAAAAATGGGGC
GTCGTGGTGGTGGTTGTATGGATCATTCATTCAAACGAGCTGCAGAACCA
TGGGAAGCTGTCGATGGTTGTGTTTATTTGCTCAGTGAGATGTCAAGTGT
TCCTGCTGCCGTACCCAGGGTGGAGAAATACATTCCTATCATGATCCAAG
CAGCAACTCATAAGCACTACACCCACTACTTGCATCTCCTTGAATCCATC
AACAAAGTCATCCCAAATATCGCCAAAGGATTGACCAAACGTGTTTTCAA
GAAATATCTGGAACAGTTCTTTGATCTCATTTTTGAGTCAGCAACATGTG
ACAGTGCATTAACTAAAAGTGCTGCTTTTGATTGTCTCGAGTTTCTCAGC
CAGTTTCTTGGTCCAAGTATCTTGAAAGGTCGAATTGAGCAATATAATCC
ACATCACTTGAAGGTGCTTGATCAAGTTTCAATTGGACCTGGTAGTATGC
AAGGAACTGTGTTTAGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000506_pilon | genome | sc0000506_pilon:61762..63771 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2010:2011 |
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