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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000050_pilon:55166..60727- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039362 ID=XLOC_039362|Name=XLOC_039362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5562bp|location=Sequence derived from alignment at sc0000050_pilon:55166..60727- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGAAATGGAGAATAACAATGAAACACAAATTGAGGAAAAGAGTGC
TGATAATAATGCCTGGGATAAAGCTCAAAATGCATTGAAAGATTTGCAAG
CTAATAAGAATAAACCAAAACATAATGGTATGAATGGTGGTTATGCAAAC
CCTTATTCAAACGGAATGATTGGGAATGGATACCCACCATACAATAATTT
TAATCCTCACTTTAATGGTCCACCACCTGGTAGCTATTATAATCAACCAC
CACCTGGACCGTACCAAAGGTAATGATATGATGCTAACTAGCTTATCTTT
TAAAATTTAAAAAAATGCTGCTTCTCCAAAAGGATTGCTGCTTTTTTATT
AAAGGATTTTTGCCGATTGCCAAAGTTACTTATTATATAATAGTATACAT
CTCTGGGTTTTAAATTTAGCTTAGACATGGCCTGAAGTAACAATTCAAGT
GGATCCAAATGTCCCATCAGTGATTGCTTTAACTTATTATTATTGTCTTG
ATACCCAGAGATTACCTTTCAAAGAGATTACCCTTTAAAGAGATGATGAC
AAAGAAATAATCAATATTTAAAGCCTGACTGACATGCTGCTAACGAGTTC
AGTCATGATTCTTGTCTCATGTGTAATCCCATTATATTTTATAAAATTAA
TGTCTTTTATTTTTATTTTAGAATGCCTTATAATCCTAGCTACCAAGGTT
ATCAAAATAATTACATGCCTCAGTATGGAAATCATGGTCCTTACAATGGT
CGCCCACGATTCAATGGACCACCTCCTGCTAATTACATTAACAATAACAT
TCAAGGTGGTTATTATGGTGCTCCTATAAATCAACAAAATGGAGGACCTC
CGCTTAAAAACATTCAGGTGCGTTAAAGTACATTTTGAAAAGCTCCTTAT
TGTGTACAGTTCTGGCAGGAGGTCTGTACTACAGTTGCATAAAGTGCAAA
GGGGGTCCCCCAGCAATTTTTTATGGGAGGGGAAAATTGATAAAAGAAAA
ATTATCCTTGGAAGTTGTTAAACAAAACAAGTTCACCTAAATAAGAAAGT
TTTTCCTATCAAAAAATATCAACATGATGCATGGTCACACAAGGAAAAAA
TGATTGAAAATTAAAAATTATTTGAAATCAGCTCATCCTCCAGTACAAGT
ACTCAAAACATAGCCCCAAAAATTTCCCCAAACAAAAATAAAAGATCCCC
ACTCCTTGAGCTCAGGGATGAATCTATGGAGCTGTACAGTACAGACAACT
GATCAGTCTAAATTCAACCCTTAAATGTTTCTAAACCCTTTCAAAATTTG
ATTAGTTACACCTTTTGTATTTTCTTCGCCAATACAGAACCAAAATAACA
TGAAAGACAAATCAAAACAAGAAGAATTCAAAGAAAAAGTCATCGAAAAA
CCAAAATCTTTTGCAGATGCTCTCAAACATAACAAGATGTGGAAACAAAA
GTGTAAGCATTATAACTTGTACTGGCATTATTAGCCTAATATGACTACCT
TAAAGGAAGAAAATTTGGCGGATTTAGCCAAATTCTGCCAAATTAAGTTC
CGGCCAAATTTATATTTTCCTCCATTCGCCAAATTAAATTCCCGCCAAAT
TTGATTTATTTCACGCATTCCCCAAATTCATGCTATTTCAAGCCTTAAAA
CTTTTTTTTTGGCCTATTTAATAACGCTTTTGGCCAAAAATATCCTGCAA
CCGCAAAATTTAGCTCCCGTCAAATTTAATTTATCCAGCTATCCGCCAAA
TTAAATTCCCCCAAAAATTCTTCCTTTAAGGTACCTAAATTTTTTTCAAT
CCTTTGTCGCTATTCATCCAATCCATATTTTAGCAAACTTAAATTGATGA
AGAAATGCTTGTGTTGTCCAATTAAAGTGAACTTAAGATTGTCAGCGTTC
TGTTATTGAACCATAAAAGACTAAGTGGAATAAGTAAGAATAAGTGGTCT
ATCATCAGCTTTTTCTCAGAACAATATCTAACTCACACTTAGTACAACTA
ACAATGTTGAGATTTGACGTCATGTTGTCCTATCCACCCACTTACGAACC
CTTTGCTGAATTTTTGTTTTAGCTACAATGAATTTCAAACAATCAAATGA
TATGAACCCTCAAAATAAAGGATGGGCATCTGGGGGATTCCTCAAGGTTG
GAGAAAAACCCAATGACGGAGAACCTGATGCTAATACAAATGTTGAAAAA
CGTGAAAGAGAAGACTTGAAAAATGGTGATCAAAACACAGATGAGCCTAA
AGCAAAGCACACCAAGCCCACAACTCCTTTAAAAAGGTATGTATTCTAAA
ATACATTGGTTTGGAAGTGTGCACTCTCTTTAGAAGGAATTACTTTGAAT
GGGATAAAATTTTGGTGTCATCTGCAAAGGAAATTTGGAAAGGCATCATC
TGCACAATATTTTTCAACAAAACTCGAAATTGTCAAATAAACAATTTTTG
AATGCTTACTGACATCAGAGAAGCGCTAATGATGTTTATTTCAACAACCA
GCTGGTAGGATTTGGCGGTAGAAGGCATAAAATCGTGACAATATTGTCTC
CCAATAGCGCAATCTGCGAAATAAAGTCCCTACGAACATTTATCCCACTA
AGTATTGAATTACACTTACATGGCTCTAGAGTGTGCATACTTATGTAAAT
GACCTTAAAGGTAAAAAAACCCTTCAAATTGCTAAGTTGATCGTACTGCT
TTTCATGTTAACAATAGATTTAAATAGATTTTCATTTGAATTATTGTCAA
TACCGCTGTCTTTACAGGTCTTTATTATTTTAAAAATTTAATAATTCTTT
TCAGCGAGAACAATAAAAAGAAGGAATGGCCTGAAGCAATGAAAACATGG
GTCAGAGAATCATTTGAGCAGTGTGGTAGTGAACGAATTAAGGATAAAAT
GGAAGAGAAATTGAAAACCTTTGTAAATCAAGTTATCAGTGATGGTAGTG
CATGGACTATCAACTGGCAGTTAAAGGCTCTTTTCAAGTAAGATTTCTAA
ACTGAGCTGAAAAACCTAGGAATTGTTTTCTTTAATCCATCTTACTAAAT
GTACTCTATAACACTTGAAAATGTTTCTTTTAGAAGTCATGTATGGTTTT
GGACATTCTATTTGACTCCCTTAATCGTTTTTGTTTAGAACTCCACCAAA
AGGATACGAACGTAGCTCAAGAAGTTCATATCGTAACACTGGCAGTCGGT
CGCGCTCCAGAAGTCGTTCGAGGAGTAATACACCTACTCGTAGACCGTCC
CATAGGCGCTCTTCAAGTAGTGGTGGCTCCTCTAACGACAGTCTGGAGAA
CGTTCGACCTGCATTCAGTAAGAAAATGAAGAACAGACTCGGTAAGAAAA
TGATCAAAAATTCCAATAACAACATCATGGCCAAAAGCAAAAGTACACCT
AACATGAAACAATTTAAGATTGAAAACGATACAGAGGTTACACAGAAGAA
ACAAGATCGAGCTGCACGATTTCAGAAAGACTTCAAGAAGTCTTCGAGCT
TCAATTCGTCCAATTTAATACCGAAAGGAGAATCAGTAAGTTTTTCTCTA
CTAGTTTCCTAAAGATTTCAATACTGAAACTTTGGCAAACTTTATGGCGT
AAATGGCTTTTTGGGGAGTCTCCATTACATCAACAACCGGTGCTAAGTTT
CACTCCTAAATTTATTATTTGCAAATATTTTATTAACTCAATGGTTAACT
AGGAACCTGTCATACCAATTTTCTACCAATCGTACGGACCATTCAACTCT
ATAACAATACATCTTGTTTTCTTTTGCAGCCAATGGATGAAGATGTCGAC
ATGAACTTTCACATCAACGGATACTGCCAAGATTTGACAAAACCATATTT
ACGTTTAACTTCGGTGGGTAATATGTTTTAACCCCTTTTACTGTAACATG
ACATTTTCCATTTTACGTTAGATTTTTTTACAATGTTCTGTAAAGGAAAC
ATTGTTAAGTTATTACATAAATTTTAACATGCATGCAAAACTTACGGAAG
GGTTTTCAGTAGGTGCTTGCTTGCATTACACTTAGGGGAAACTAATAGTT
AACTGGAAGAGCCATCTTTGATTCCTAGTCATGTATGGTTTCAAATACAT
TACAGTTGATTTCTCGGTTCTATGATTTCCCCATTTTTCCTTCGCAGGCG
CCTGATCCATCGACAGTCCGTCCCGTCAACATTTTGAAGAAGTCATTGGA
ACACGTCGAAACGCAATGGAAGAAGAAGAACGACTACCATTTCGCTTGCG
AACAGATGAAGTCCATCCGTCAAGATTTGACCGTCCAAGGAATTGAAAAC
GAATTCACAGTTACAGTATATGAAACCCACGCTAGAATTGCTCTCGAAAA
AGTAAGTTTTAGGCAGACATTCCCCTCTTCATAATTGTATCCCATCCTTT
TTAAATATTTTTAAAGCCATTTAATATGACCCATCCTTTTATAATAACCA
CAACTTGGTAATCTTTCATTTTGTCTCTCTCTTTTTCCAGGGTGATCGAG
AGGAATTCAATCAATGCCAAACGTGTTTACGTAGGCTTTACAGCAAAGGA
ATCAACGGTCAAGTAGCCGAGTTTACGGCCTACAGTATTCTCTACTATAT
TTACACAAAAAGCACTTTGGACTTAAATTCTTGTCTTGCCTCACTGACCA
AAGATCTGAAGAAAGACGCGCTTGTTCAACACGCCCTGTCGGTGCGCTCT
GCATTGGCACTAGATAATTATCGTTCATTTTTCAAGTTTTATTTACAAGC
ACCAAAAATGGGTGGATCTCTCATTGACCTTTTTATAGCTAGGGAACGTA
AAGAAGCTCAAACGGCTAGTGAAGGCGTAAGTATATAAACACCCCTCCCC
TCCCCTTCTTTCTGAAACCAGCCAGCCTATCCTAGAAATCAGTCGCCTTT
CCTCACATCTAATGAGCAGTTTAAACTTATCTCTTCAACCATTATCCTTT
TAGTATATAAAGTCAACCCCATCTAAGCACATACATTTCTTTATAATTAC
CTCCTCTGTATAGTAGTACTGTTAACACATCCTGTATTTCTTTTTAAGGC
ACTTTTAAGTGTTAAAATTTTCTTATTAAAAAATCTAAGCTCCCCATTGA
GGATTTTTTAGCCAGTGGGCGACAGTATCGGTAAGAATGTGATTGGATTT
GGAGAAACTTCGACTTAAATATATGAGAATCTCAAATATCTTTACAAAAC
AATTTGCCCCAAAAAGTTTACTATTTTTCGCTGGGATAAATTCTCGGGAC
TCTGGGAATTTTTTCACCGATGCGCAGGTAAGTTTTAACCCTCGGGATAG
ACCTTGAGACTAAATCTGTCCTCTGTAACTTCAGTCCTTTACAAAGCTCA
ATCTACCTTTTCTCTGTATATTCATGTTTTTTTTTCTTTCTTTTTCAACC
GTGGTTGATAGGTATCGACCAAGTTTAAGTGTCGCACATATAACAACCCA
ATTAGCCTTCAAATCTGAAGACGAATGCCTCGCTTGGCTTCAAGAATTGA
ATATCATATTCCTTGCTAACGACCCCACTAAAGTTGATTGTAAAGCATCT
GTTGTTACATAA Coding sequence (CDS) from alignment at sc0000050_pilon:55166..60727- >XLOC_039362 ID=XLOC_039362|Name=XLOC_039362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4302bp|location=Sequence derived from alignment at sc0000050_pilon:55166..60727- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGAAATGGAGAATAACAATGAAACACAAATTGAGGAAAAGAGTGC
TGATAATAATGCCTGGGATAAAGCTCAAAATGCATTGAAAGATTTGCAAG
CTAATAAGAATAAACCAAAACATAATGGTATGAATGGTGGTTATGCAAAC
CCTTATTCAAACGGAATGATTGGGAATGGATACCCACCATACAATAATTT
TAATCCTCACTTTAATGGTCCACCACCTGGTAGCTATTATAATCAACCAC
CACCTGGACCGTACCAAAGATGAAAGAAATGGAGAATAACAATGAAACAC
AAATTGAGGAAAAGAGTGCTGATAATAATGCCTGGGATAAAGCTCAAAAT
GCATTGAAAGATTTGCAAGCTAATAAGAATAAACCAAAACATAATGGTAT
GAATGGTGGTTATGCAAACCCTTATTCAAACGGAATGATTGGGAATGGAT
ACCCACCATACAATAATTTTAATCCTCACTTTAATGGTCCACCACCTGGT
AGCTATTATAATCAACCACCACCTGGACCGTACCAAAGAATGCCTTATAA
TCCTAGCTACCAAGGTTATCAAAATAATTACATGCCTCAGTATGGAAATC
ATGGTCCTTACAATGGTCGCCCACGATTCAATGGACCACCTCCTGCTAAT
TACATTAACAATAACATTCAAGGTGGTTATTATGGTGCTCCTATAAATCA
ACAAAATGGAGGACCTCCGCTTAAAAACATTCAGAATGCCTTATAATCCT
AGCTACCAAGGTTATCAAAATAATTACATGCCTCAGTATGGAAATCATGG
TCCTTACAATGGTCGCCCACGATTCAATGGACCACCTCCTGCTAATTACA
TTAACAATAACATTCAAGGTGGTTATTATGGTGCTCCTATAAATCAACAA
AATGGAGGACCTCCGCTTAAAAACATTCAGAACCAAAATAACATGAAAGA
CAAATCAAAACAAGAAGAATTCAAAGAAAAAGTCATCGAAAAACCAAAAT
CTTTTGCAGATGCTCTCAAACATAACAAGATGTGGAAACAAAAGTAACCA
AAATAACATGAAAGACAAATCAAAACAAGAAGAATTCAAAGAAAAAGTCA
TCGAAAAACCAAAATCTTTTGCAGATGCTCTCAAACATAACAAGATGTGG
AAACAAAAGTCTACAATGAATTTCAAACAATCAAATGATATGAACCCTCA
AAATAAAGGATGGGCATCTGGGGGATTCCTCAAGGTTGGAGAAAAACCCA
ATGACGGAGAACCTGATGCTAATACAAATGTTGAAAAACGTGAAAGAGAA
GACTTGAAAAATGGTGATCAAAACACAGATGAGCCTAAAGCAAAGCACAC
CAAGCCCACAACTCCTTTAAAAAGCTACAATGAATTTCAAACAATCAAAT
GATATGAACCCTCAAAATAAAGGATGGGCATCTGGGGGATTCCTCAAGGT
TGGAGAAAAACCCAATGACGGAGAACCTGATGCTAATACAAATGTTGAAA
AACGTGAAAGAGAAGACTTGAAAAATGGTGATCAAAACACAGATGAGCCT
AAAGCAAAGCACACCAAGCCCACAACTCCTTTAAAAAGCGAGAACAATAA
AAAGAAGGAATGGCCTGAAGCAATGAAAACATGGGTCAGAGAATCATTTG
AGCAGTGTGGTAGTGAACGAATTAAGGATAAAATGGAAGAGAAATTGAAA
ACCTTTGTAAATCAAGTTATCAGTGATGGTAGTGCATGGACTATCAACTG
GCAGTTAAAGGCTCTTTTCAACGAGAACAATAAAAAGAAGGAATGGCCTG
AAGCAATGAAAACATGGGTCAGAGAATCATTTGAGCAGTGTGGTAGTGAA
CGAATTAAGGATAAAATGGAAGAGAAATTGAAAACCTTTGTAAATCAAGT
TATCAGTGATGGTAGTGCATGGACTATCAACTGGCAGTTAAAGGCTCTTT
TCAAAACTCCACCAAAAGGATACGAACGTAGCTCAAGAAGTTCATATCGT
AACACTGGCAGTCGGTCGCGCTCCAGAAGTCGTTCGAGGAGTAATACACC
TACTCGTAGACCGTCCCATAGGCGCTCTTCAAGTAGTGGTGGCTCCTCTA
ACGACAGTCTGGAGAACGTTCGACCTGCATTCAGTAAGAAAATGAAGAAC
AGACTCGGTAAGAAAATGATCAAAAATTCCAATAACAACATCATGGCCAA
AAGCAAAAGTACACCTAACATGAAACAATTTAAGATTGAAAACGATACAG
AGGTTACACAGAAGAAACAAGATCGAGCTGCACGATTTCAGAAAGACTTC
AAGAAGTCTTCGAGCTTCAATTCGTCCAATTTAATACCGAAAGGAGAATC
AAACTCCACCAAAAGGATACGAACGTAGCTCAAGAAGTTCATATCGTAAC
ACTGGCAGTCGGTCGCGCTCCAGAAGTCGTTCGAGGAGTAATACACCTAC
TCGTAGACCGTCCCATAGGCGCTCTTCAAGTAGTGGTGGCTCCTCTAACG
ACAGTCTGGAGAACGTTCGACCTGCATTCAGTAAGAAAATGAAGAACAGA
CTCGGTAAGAAAATGATCAAAAATTCCAATAACAACATCATGGCCAAAAG
CAAAAGTACACCTAACATGAAACAATTTAAGATTGAAAACGATACAGAGG
TTACACAGAAGAAACAAGATCGAGCTGCACGATTTCAGAAAGACTTCAAG
AAGTCTTCGAGCTTCAATTCGTCCAATTTAATACCGAAAGGAGAATCACC
AATGGATGAAGATGTCGACATGAACTTTCACATCAACGGATACTGCCAAG
ATTTGACAAAACCATATTTACGTTTAACTTCGCCAATGGATGAAGATGTC
GACATGAACTTTCACATCAACGGATACTGCCAAGATTTGACAAAACCATA
TTTACGTTTAACTTCGGCGCCTGATCCATCGACAGTCCGTCCCGTCAACA
TTTTGAAGAAGTCATTGGAACACGTCGAAACGCAATGGAAGAAGAAGAAC
GACTACCATTTCGCTTGCGAACAGATGAAGTCCATCCGTCAAGATTTGAC
CGTCCAAGGAATTGAAAACGAATTCACAGTTACAGTATATGAAACCCACG
CTAGAATTGCTCTCGAAAAAGCGCCTGATCCATCGACAGTCCGTCCCGTC
AACATTTTGAAGAAGTCATTGGAACACGTCGAAACGCAATGGAAGAAGAA
GAACGACTACCATTTCGCTTGCGAACAGATGAAGTCCATCCGTCAAGATT
TGACCGTCCAAGGAATTGAAAACGAATTCACAGTTACAGTATATGAAACC
CACGCTAGAATTGCTCTCGAAAAAGGTGATCGAGAGGAATTCAATCAATG
CCAAACGTGTTTACGTAGGCTTTACAGCAAAGGAATCAACGGTCAAGTAG
CCGAGTTTACGGCCTACAGTATTCTCTACTATATTTACACAAAAAGCACT
TTGGACTTAAATTCTTGTCTTGCCTCACTGACCAAAGATCTGAAGAAAGA
CGCGCTTGTTCAACACGCCCTGTCGGTGCGCTCTGCATTGGCACTAGATA
ATTATCGTTCATTTTTCAAGTTTTATTTACAAGCACCAAAAATGGGTGGA
TCTCTCATTGACCTTTTTATAGCTAGGGAACGTAAAGAAGCTCAAACGGC
TAGGTGATCGAGAGGAATTCAATCAATGCCAAACGTGTTTACGTAGGCTT
TACAGCAAAGGAATCAACGGTCAAGTAGCCGAGTTTACGGCCTACAGTAT
TCTCTACTATATTTACACAAAAAGCACTTTGGACTTAAATTCTTGTCTTG
CCTCACTGACCAAAGATCTGAAGAAAGACGCGCTTGTTCAACACGCCCTG
TCGGTGCGCTCTGCATTGGCACTAGATAATTATCGTTCATTTTTCAAGTT
TTATTTACAAGCACCAAAAATGGGTGGATCTCTCATTGACCTTTTTATAG
CTAGGGAACGTAAAGAAGCTCAAACGGCTATGGTTGATAGGTATCGACCA
AGTTTAAGTGTCGCACATATAACAACCCAATTAGCCTTCAAATCTGAAGA
CGAATGCCTCGCTTGGCTTCAAGAATTGAATATCATATTCCTTGCTAACG
ACCCCACTAAAGTTGATTGTAAAGCATCTGTTGTTACATAATGGTTGATA
GGTATCGACCAAGTTTAAGTGTCGCACATATAACAACCCAATTAGCCTTC
AAATCTGAAGACGAATGCCTCGCTTGGCTTCAAGAATTGAATATCATATT
CCTTGCTAACGACCCCACTAAAGTTGATTGTAAAGCATCTGTTGTTACAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050_pilon | genome | sc0000050_pilon:55166..60727 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1993-2151:160 |
| Aaloc | 1663-1989:1073 |
| Aaloc | 1459-1662:1416 |
| Aaloc | 1375-1458:1784 |
| Aaloc | 979-1374:2424 |
| Aaloc | 796-975:2758 |
| Aaloc | 583-792:3489 |
| Aaloc | 466-579:4226 |
| Aaloc | 271-465:4891 |
| Aaloc | 1-267:5563 |
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