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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000050_pilon:11867..17890- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039360 ID=XLOC_039360|Name=XLOC_039360|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6024bp|location=Sequence derived from alignment at sc0000050_pilon:11867..17890- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGATACAGTCATGGTTTCACCTGTTAAAGATGATTCATCAACAAG
AAGTACCTCACATGATAGTGGGTTTGACATTGTTCCACATATGTCTGATT
CATTTGCTCCTCCACCTTCAATAAAAACTGCTTGTCGCGCTGACGGTGAT
AGACATGAACAAAGGAAAGACATTAAAGAGTTGAAGAATTTGAGAGAAGT
TCGAATGAAAAAGGAATTGGTTTATTTTGATAATGAAAAGATTCCAGAAA
TTATTGAGAGAATACAAGCAAAGAAAAATCTTGGTTAGTATTTTTGATTT
GAATCTTTGATAATATGAATAAATTTTATTATTTACATTGAAAACATAGT
GTTAATCACTAATTTACTGAGAATCTTACTCCAAACTACAGAAAAATTAT
ATTTCATCTTCCTTTCAAAACAAATGTATGGAGTAAACTTTTCATTTTCT
AGATCGTGAAATTGAGACTGAGATAAAAAACCTTGAGGATATGATCAAAA
ACAAGGACAATGTCAGAAGAGAATATTTGATTGCAGCTGCCGAAACTGCA
TTAGGTAAAACAACTTTCGCGCCTTTATTGGACCTACCTCGGAGGTCCTT
TAAATTTACCCATGTCGGTCTCTAATTTTCAATCTTAAAAAAGTTAGTAC
TAGGGTGATTTGGGAATGTTTTTTCTTGGTAAACCGGCTTCTATGTAGGG
GGTGGGGGTCCCTATTTTACCAGGTACTAAGAGGGAGTTGTGGTATCTAA
GACAAATTTTTCCTGAATAATTAGGGTCAGTAAGGGTCAGTACCCTGCAA
CAATACAGCTACAATCAAAGTCATAATATTTGAGAAAAAAGGGAAATTCC
CCAGGAAGTTTTGAAACCACAATCGATTTGTAAGTACTCTAAAGTAGGTT
CGAAGGGTAGAGTTTTAACTCTGAGTTTTAACGCTAGATAGGATCTAAGG
ATCCAAAAGCTCAAAAATAGTCCAATAAGGCTCAGAATATAGGCCTCGAG
GTCTGCAAACCCATCCCCCATCCCAAATTGAAATATTCGATTTTAAAAAT
TAAAGAGAAAAAATCGACTTTCTCGCCAGAACTTTAAATCTTGAAAAACG
TTAAAATAATCGGAATTCTCAATATATTTCAACCATGATTGTTTACAATT
TAGAAACAATTTTTAAATTTCTTTTTCAGCCAAAATGAAAGAAACCAAAC
AAATTGCAAACGATGGTGATAGCACATTGAAAAGAGCAATGGAAATCGTC
CAATCAGTATTCCCAGCATTTTTATCCATCTGGGAAAAATCTAAAGAGTG
TACAACTGAAAATGATCAAGTAGATTATGAATTGATGAAGTTTGAAGAAG
TAAGACATGAAGTCAGACAAGCTGGATTGGATGTTGATCTTCGGATTGAG
AAATCAAACATTTCAAAACAGCATATTGGTAAGAATTTTCTTGCTATCCA
GGCCATATTTTAGAAAGACAAGGCAGCATCTGTTGGTGACCAAAAAGGGC
ACTTTTTCCAGTGTTTTTTTATTAAAAAGGCTGTTTTTACCAATATTTTA
GTAATTTCAAGGGCAGTGTCTGATAACCGGGTGCTTAAAGGGCATGACCA
TGAAAAATGGCCTGCTATCTACTTTCTCTAATAAAAAGTGCTGTTCTTCT
ATTGGCAATTGAAAGAAATTGGAAAGTTTTTTTTATTCGTATTATTTTCT
GACTTATGATAGCTTTTAGGCAAAAAACTCATGTCTCACCGTTGCATTCA
CCGAATATTTCAAAAGGCATGCCACGCTTTATTGACTATTTCTCATCAAA
CACTTATAATATGCAAGTTATTTGAATTATATTCTACAGATAATGCCATC
AAATTTGCTGAGGCAGATGTTGAAAAAATCACCAAGTTGAACAAACGAGA
AGTAGAGGAAAACCGTATGTCTCAATGCCATGATAGTAAAACTGAAATAG
ACGCTGTGGTGGAGAGTGAAATTGATATGGTGGACACGTGGATTACAACG
TGCAAAGCGGACAAAGAAAAACTTAGTATGATTTCATTCGTTTTGGTTTC
TTTTGAAAAATTTGAGGTCTCTAATGTTCCTATTCAAACTTATAACCCAG
CGAATACGTTTATTCTGAACCTAAGAGTACACTTATATAAATAATCAAGT
ATTTAACGCGGGAAAAATGAGTGCGACAAGGCAAGGTAGGGTTTTCGAAA
ATCACCACAGCTCAAATTTTTTTAAATTCTTGTAATTAAAAAGCAAGGGT
AACCGATTCGCGTTCATAACTTTAGTAGTTATTTAGGTGTAATGAGGTGA
CTCCATTCTTTAGGTCTAGGACTAATTCGCGTACTACCTCTCTTTGCAGT
TTTGCAGAGCTTTAGCATAGTAAGAACATTCATCTTGTGTGGCTCTCTTC
GGAGTTGAGAGTGAGGGAGTCTATAACCCCTTTTCTATTGGCGCTTAGCC
TGGGAGATCGAATGCTGAAACTGAGCACCAAACCTACTCTCAGCTCCCAT
CTACGAGCCTGATCGGATTCCCAATCTACTATATACTCTTTTGCTGAATT
AGCGGTGACAGGGGAACGAAATCACAACCTTTGGGTTGTAAGGCTAATGC
TCTATGGACTGAGCTATATAGAATTTTAATTGGATGTATTTTTCTCTCAG
CTGAAATCGAGGACGAACAAGAGAAACGGCAGAAGAAAGCAACTGAACTC
TACAACCAAGACATCAAGATCAGGAACGAACATTTAGATTTCAACGTGAA
AGAGATTGAAGAATTAGAGGAGAAATTACGAATCAAGAAAGAAGAAGCTG
AAAACCGAAGAGTAGAGTTGAGCTTCCAAAAGCAAGTTCAATTACGTTCT
CAAAAGGTTGGGATTTGTCTTGATTACTATTTTATCAAAAGGTCTGAAAA
GGTTGGGATTTGTCTTGATTACTATTTTCTCAAAAGGTTGGGATTTAACT
TGATTACTATTTTCTCAAAAATTTGGGATTTGTCTTGATTACTATTTTCT
CAAAAGGTTGGGATTTAACTTGATTACTATTTTCTCAAAAAGTTGGGATT
TGTCTTGATTACTCTTTTCTCAAAAGGTTGGGATTTAACTTGATTACTAT
TTTCTCAAAAGGTTGGGATTTATCTTGAGTAGTTTTTTCTCAAAAGGCTG
GGATTTATGTTTCTTCTGCAAAGGGCTTTATCCATTCTCTGTTTTTAGAT
ATTTTCTTAAAAATTTCTATAAAAATGTTTTTAATAACATCCTCAGTTTT
GATGAAGTGTAATCTCGCTCAAAATATATTGAGAATTTAGGTTAATTCCT
CGTTTTTAGCATTTTACAGTTCGGGCGAGAAAGTTGTTTTTGGGCTGATT
GATAAATTTATTCGAATATTTCAAATCGGGTTGGGTTTATAGACTTCCAG
GCTCTATATTCTGCCCTATTGGACCATTCTTAGACTTTTGGATCCTCAGC
GTTAAAACTCTACCCTTCCAACCTGATTTAGAGCACTTCCAAATCGTTTG
TGGTTGTAAGATGATAAGAATTTCCCTTTTTTCTCAAATATTATGACTTT
GATTGTATTCAAAATTAGACAAATTATACGAGTTCAGCATGTATGAATAT
CTTTTCAATTCCTAAATTTTTAGCTTCATGACGACTTGATGAAAGAAATG
AAAGAGCATCGTGCTGCATTGGAAGATATCCAGGCTAAAGCAAACACTGC
TCGCAAAGTGGTCGAGAAAATGAGCAGTAAGTCGCTTTTGGAATACATCT
AAATTAGAAAAAATATATAAATACCAGTCCAGATAGCTGATAATTGTTCT
CTTTGAAAATGTGGTCAGTAATAAATTTTTTTTCTATCTCGAGAAAAGTG
ATGTGTAGAATGTGTGAATTGACCATGAAAAATAAGAATAACAATTACTG
TGACTGTTAGGATAAATTCATTTTCACTGCCAATTCAATTATGGTGATTT
TGTTTTAGGTATCCCGCTGCATACGGTTTGTTTACAAATTTGGTCAGTAC
TTTTATGTCCCTTTTACATGTGATAGAGTAGATTTTACGGAGAATTTTTT
TCTCCATTTTAGTTTGCGGTGAAGCGTTAGTGGAATCAGCCATGAAGGCG
GAAGGAGAATTCTTAAAAGAGTTGAGCAATTTGGAGATTCAAGTGATTGA
GAAGTTGCGAGATGCTTTGGCTCACAGTGCAATCGAATTACGAATCAAAG
TTGATAATGCTACCAAGAATATCGACGATGCTAAAGATAATGTAAGTTAA
GATAAATCTCTTAACCATAGGGGGGACTTTAGCCTGTAGTGTATTACTCT
GTACCAGAGTGTATCTAACGAAAATTGCTTCGTAGTACACTCTGTGCACA
TTGTCTATTTGATATAAAAATCCCCGTACGGAGGCCTCTGCGATGAAGTA
TGATTTATGAATAGCAACACTTCTCTTGTCGTCTCCCTCACTCCATCGCA
GTGGTCATTTTGAAAAATCTCAAATGAGAAAAAACAATAACAACATACCT
CTACGGCAATGAATTTTTGAAATTAATCGTAGTTACTGGGTGTGTGTACA
CACAAGTAGTGTATTGGTTTTAGACAACTTCAAGCTGTTATATTGGTTAA
GTAGCTAAGTAAGTTTTCGATCACAGTCGAAGGCTGCTCTTTCGATAGCT
ATTCACCCGAAGTAAGCGGAGGACGCCACTCTTCTCTCCGGATTGCTCCA
CTTACCCTCGTTCCTTCTCATAATTACTGAGCATCTACCAGAAAGGCATT
AAGTACCATTTTTGTAGTAGGAACGAAGTCTTTAGTATGACTGCTGGGAA
TTAAACCGTAGCTGGATACTCTACCATTGCTATATGGCTAAGCATGACGT
CATCGCTGAGTTGCTGTTTTCATACTTAGATAGATCTAAGAAAGTTGTTT
GGTGTTGATGCTTGAAAGTCCTTAGGCAAACGCTAATTATCAAATAAACG
AGGCATTATAGAACACTTTGACGCGTATTTTTTCCCCAATATTCAATTTC
TTCATTCCAGGATTCTACTGGCAAGCCCAAAGAGATACTTTGTTTTGTGC
AGATGAAGCTTATAAAAGCGTAGGTTGAAAGTTATATATAATTTGCATGG
TTCCTTTTTTTTGTTTTACAGATGAAAGTTCTTAAAGAGAAATGGCAGAA
AGCAGCTGAGCGTCAGAACAAACTTCAAGTAGAAAGAAACAAAAAGGAAT
ATAACGAGTACAAGGCAGAAGCCAAACGAGAAAAAACTCTTTTGGAATCG
TCGCAGAAAGAATTGGAATTACTGACAGAGAAAATGGGACATTTGGAAAT
CAAACTGGCTGATTCTGGAGTTGAATTTAAAACATTGGATGAACTACGTA
AGTCAAGATTTCTTCAATAAAGAAGCTTTTTGACAGATCACTTTATTTTG
ACGTCAATCTAACGTTACATTGGTTACACGTAAGTTGTAACGCCCCTGTC
GACGCACCGGACTTTACAAACACCGGACACGTAAATTCCGGTGTTGATCG
AGGATACTTTTTAACACCGGACGATCTCGACACCGGAATTGAGTCCGGCG
TGTCCGGTGCGCATTACTTTTGAAACAAACTTTGTCCGGTGTCCAGAAAT
TCGAAAATTAACACCGGAAAAAAAATGTTTCCGGTGTGGCTGAGAGATAC
TTTTTGGCACCGGACAAACCGGACTGAAAATTCAAATATAGTGGGGGGGG
GGATAAAAATGATAATCGAGAAAAATTTGGATTTTTAGCAGGGGGAACCA
AACCATGAGGTTTTTATGAGATTATATTGAGACAGCCTTTATTGCTCAAA
TTTTCCTTAACTCTGATAGCAAATTTAAGTTTCCAGTGCGTTTTTAAGCT
TTAGAGACTGCTTTAAAAATATAATTTTGTAATCATTAACAACTTAATTT
TCTTTCATTTTCCTATTTTTCAGACGAACTTCGATTGGTTGAATGTCAAG
AAGACTACAATGATTTTAATTCGCTTTCGTCTCTTGATCCCTCTGAAGAT
GAATTGTCTGATGGTGGGTTGTGA Coding sequence (CDS) from alignment at sc0000050_pilon:11867..17890- >XLOC_039360 ID=XLOC_039360|Name=XLOC_039360|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3270bp|location=Sequence derived from alignment at sc0000050_pilon:11867..17890- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGATACAGTCATGGTTTCACCTGTTAAAGATGATTCATCAACAAG
AAGTACCTCACATGATAGTGGGTTTGACATTGTTCCACATATGTCTGATT
CATTTGCTCCTCCACCTTCAATAAAAACTGCTTGTCGCGCTGACGGTGAT
AGACATGAACAAAGGAAAGACATTAAAGAGTTGAAGAATTTGAGAGAAGT
TCGAATGAAAAAGGAATTGGTTTATTTTGATAATGAAAAGATTCCAGAAA
TTATTGAGAGAATACAAGCAAAGAAAAATCTTGATGGATGATACAGTCAT
GGTTTCACCTGTTAAAGATGATTCATCAACAAGAAGTACCTCACATGATA
GTGGGTTTGACATTGTTCCACATATGTCTGATTCATTTGCTCCTCCACCT
TCAATAAAAACTGCTTGTCGCGCTGACGGTGATAGACATGAACAAAGGAA
AGACATTAAAGAGTTGAAGAATTTGAGAGAAGTTCGAATGAAAAAGGAAT
TGGTTTATTTTGATAATGAAAAGATTCCAGAAATTATTGAGAGAATACAA
GCAAAGAAAAATCTTGATCGTGAAATTGAGACTGAGATAAAAAACCTTGA
GGATATGATCAAAAACAAGGACAATGTCAGAAGAGAATATTTGATTGCAG
CTGCCGAAACTGCATTAGATCGTGAAATTGAGACTGAGATAAAAAACCTT
GAGGATATGATCAAAAACAAGGACAATGTCAGAAGAGAATATTTGATTGC
AGCTGCCGAAACTGCATTAGCCAAAATGAAAGAAACCAAACAAATTGCAA
ACGATGGTGATAGCACATTGAAAAGAGCAATGGAAATCGTCCAATCAGTA
TTCCCAGCATTTTTATCCATCTGGGAAAAATCTAAAGAGTGTACAACTGA
AAATGATCAAGTAGATTATGAATTGATGAAGTTTGAAGAAGTAAGACATG
AAGTCAGACAAGCTGGATTGGATGTTGATCTTCGGATTGAGAAATCAAAC
ATTTCAAAACAGCATATTGCCAAAATGAAAGAAACCAAACAAATTGCAAA
CGATGGTGATAGCACATTGAAAAGAGCAATGGAAATCGTCCAATCAGTAT
TCCCAGCATTTTTATCCATCTGGGAAAAATCTAAAGAGTGTACAACTGAA
AATGATCAAGTAGATTATGAATTGATGAAGTTTGAAGAAGTAAGACATGA
AGTCAGACAAGCTGGATTGGATGTTGATCTTCGGATTGAGAAATCAAACA
TTTCAAAACAGCATATTGATAATGCCATCAAATTTGCTGAGGCAGATGTT
GAAAAAATCACCAAGTTGAACAAACGAGAAGTAGAGGAAAACCGTATGTC
TCAATGCCATGATAGTAAAACTGAAATAGACGCTGTGGTGGAGAGTGAAA
TTGATATGGTGGACACGTGGATTACAACGTGCAAAGCGGACAAAGAAAAA
CTTAATAATGCCATCAAATTTGCTGAGGCAGATGTTGAAAAAATCACCAA
GTTGAACAAACGAGAAGTAGAGGAAAACCGTATGTCTCAATGCCATGATA
GTAAAACTGAAATAGACGCTGTGGTGGAGAGTGAAATTGATATGGTGGAC
ACGTGGATTACAACGTGCAAAGCGGACAAAGAAAAACTTACTGAAATCGA
GGACGAACAAGAGAAACGGCAGAAGAAAGCAACTGAACTCTACAACCAAG
ACATCAAGATCAGGAACGAACATTTAGATTTCAACGTGAAAGAGATTGAA
GAATTAGAGGAGAAATTACGAATCAAGAAAGAAGAAGCTGAAAACCGAAG
AGTAGAGTTGAGCTTCCAAAAGCAAGTTCAATTACGTTCTCAAAAGCTGA
AATCGAGGACGAACAAGAGAAACGGCAGAAGAAAGCAACTGAACTCTACA
ACCAAGACATCAAGATCAGGAACGAACATTTAGATTTCAACGTGAAAGAG
ATTGAAGAATTAGAGGAGAAATTACGAATCAAGAAAGAAGAAGCTGAAAA
CCGAAGAGTAGAGTTGAGCTTCCAAAAGCAAGTTCAATTACGTTCTCAAA
AGCTTCATGACGACTTGATGAAAGAAATGAAAGAGCATCGTGCTGCATTG
GAAGATATCCAGGCTAAAGCAAACACTGCTCGCAAAGTGGTCGAGAAAAT
GAGCACTTCATGACGACTTGATGAAAGAAATGAAAGAGCATCGTGCTGCA
TTGGAAGATATCCAGGCTAAAGCAAACACTGCTCGCAAAGTGGTCGAGAA
AATGAGCATTTGCGGTGAAGCGTTAGTGGAATCAGCCATGAAGGCGGAAG
GAGAATTCTTAAAAGAGTTGAGCAATTTGGAGATTCAAGTGATTGAGAAG
TTGCGAGATGCTTTGGCTCACAGTGCAATCGAATTACGAATCAAAGTTGA
TAATGCTACCAAGAATATCGACGATGCTAAAGATAATTTTGCGGTGAAGC
GTTAGTGGAATCAGCCATGAAGGCGGAAGGAGAATTCTTAAAAGAGTTGA
GCAATTTGGAGATTCAAGTGATTGAGAAGTTGCGAGATGCTTTGGCTCAC
AGTGCAATCGAATTACGAATCAAAGTTGATAATGCTACCAAGAATATCGA
CGATGCTAAAGATAATATGAAAGTTCTTAAAGAGAAATGGCAGAAAGCAG
CTGAGCGTCAGAACAAACTTCAAGTAGAAAGAAACAAAAAGGAATATAAC
GAGTACAAGGCAGAAGCCAAACGAGAAAAAACTCTTTTGGAATCGTCGCA
GAAAGAATTGGAATTACTGACAGAGAAAATGGGACATTTGGAAATCAAAC
TGGCTGATTCTGGAGTTGAATTTAAAACATTGGATGAACTACATGAAAGT
TCTTAAAGAGAAATGGCAGAAAGCAGCTGAGCGTCAGAACAAACTTCAAG
TAGAAAGAAACAAAAAGGAATATAACGAGTACAAGGCAGAAGCCAAACGA
GAAAAAACTCTTTTGGAATCGTCGCAGAAAGAATTGGAATTACTGACAGA
GAAAATGGGACATTTGGAAATCAAACTGGCTGATTCTGGAGTTGAATTTA
AAACATTGGATGAACTACACGAACTTCGATTGGTTGAATGTCAAGAAGAC
TACAATGATTTTAATTCGCTTTCGTCTCTTGATCCCTCTGAAGATGAATT
GTCTGATGGTGGGTTGTGAACGAACTTCGATTGGTTGAATGTCAAGAAGA
CTACAATGATTTTAATTCGCTTTCGTCTCTTGATCCCTCTGAAGATGAAT
TGTCTGATGGTGGGTTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050_pilon | genome | sc0000050_pilon:11867..17890 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1537-1635:100 |
| Aaloc | 1309-1533:904 |
| Aaloc | 1132-1308:1961 |
| Aaloc | 1027-1128:2402 |
| Aaloc | 823-1026:3373 |
| Aaloc | 637-819:4184 |
| Aaloc | 388-633:4844 |
| Aaloc | 286-384:5571 |
| Aaloc | 1-282:6025 |
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