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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:268206..271340+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039305 ID=XLOC_039305|Name=XLOC_039305|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3135bp|location=Sequence derived from alignment at sc0000086_pilon:268206..271340+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATGAGAATCGAATACTGAAGAACAAAGAAGCTCGTTTCAATGAAGA
ATACAATACATTGGAGGAAGAAAATACttctttacagaaaaacttGTCAC
GTGCTAAACAAACCATGGTCGAATTCGAAGGATTGAAAGTAGAAAATCAA
AGTCTTTTAGACGaggtttgtgttttttttcatctaGCAGCCTATGGCGA
CTGTTTGTTGtcctttttcaagatttaaacaTTAGAAAAcctttgagttt
aaagccttgAAAGTAGCTAAAAAGTTATCtaaaacctttctcaagcaaga
aacaGTATGACCTCTAATATTTGCGCCGTATTAAGATTGACAGatttaat
cttttctttatttttaagcgccatttttcgaaatctggcgatGGGTATTA
CTTTCAATCCAGTTCAATCTGGTGTTTGAGTGAAAACCATGCAGGTCACG
CGTTTGGCTGGGAGATTCCCATTCATGAGTTTCAAATCTAGCCCCTTCCA
AGCTTTGAAATCAATATGATATGATTTAGGCTATTTTATAGACAGGTAGT
TGTTGTAGCTACTACATTACTTATGGATTTAAGTGAGCCGCAATTCGGAT
CAATTATTAGATATACACTGAAGAATTTTTATCGAAGTTTGATCACCGGT
CTTTCCGCCAACTCAGCGAATGGGTAGTTAAGATTGGATAGTAacctgat
ctaggcggtaagttacttagagctgagagtaggtgttgCGATCCACCTCA
GCATTGAACCTCCCaggcaaatagaaaagggggtAGACTCTCGGCTTGGT
TTGCAGCAACCAGATAAACATTTTGCTCACTTACAGTATATTATTATTCT
CAGATTGACAGCTTACGATTACAATTACAAATGGCATCCAGCGCACGTGA
TCAATTCGAAAAACAGTTGCACGAAAGTCTTGAATCACTAAAAGAACAGC
GCGAAAAAATCACTCACAATCAGAGAGAAATTAATGAGCTTAAACAACAA
GCTATTGCACAGAAATGCGGCATGGTTTACGGAAAAGGTaatggaaattt
tcttccgTTAAGGTACTTGTGTTTGAATCGAGAGTCATAATAATAAGTCT
CAAAacgtgttttttctttttgttacttctgacgtttttaaccccttact
tttttttatttacatacAGAAAAGGGTCTTTATTCTTGTTCACGATCGGA
AATTGCCTGGTTAGAATTTGAAGAAAGATAATTACATTTCAGGTGACTTC
AATGGGCGTATTGACATGGATGGTGGCGGTGAACATCCTTTGGTGAGACA
AATTGAACAAGAATACAAGACAACGCATCCTTCGCCAAGCCCAggtattg
aagaaaaaatcattcttcTTTCTGTTACTGTAGAATGAGTTGTTAAAAAA
GTGTTCTAAAAATATCTGTTGTTTGTCATAAATAAAGCCTTGCAGGTTTT
GCAGCTCCAGCGTTaaaaaaaTGCATTCATTTTTGGGTGTAAGGCCGCCa
gcctttttatcaaaatataaagatttttgtTAACTCTGATTCGGATTGTC
AAGGGTAACGTAAAGTCTACACGCGCATTGTAAGCTGAAGGAGCCACTAT
TTtcgttcgaattacaaaaagattcgaataatggatTTAAGTAAAGAAGA
CTACGTATTCATTTTTTGACTGTATGGTGGGGTCAACCCGTTAATATGCC
ACGATCTCCTTAAGATGATATTTCACTATTTCTATATGATTGGACCATTA
ATGTTACTTTACTGATAATTGATGTCTTTATTTTTACTTCAGCCGTGGTA
GATGACATCCTTAAAGAATTACAGGGTGGAGAAGTTCGCGATCTAGAAGA
ACAGTTACGGGTAGTTCAAGAAGAAAAAGAGCACTTGGAAAAAGAGCTAA
CAAGACAAGCCTCTAACGCCGATATAGTTGCTGATGCTACGTCCCTTCTC
CGTAGAGGCTCTAGTGGGAATGTATCTGAAGAAGGAGATGAGTATACCTT
GAATAATCAGTTGCAGGAATTATCGGACGTCCGTAGTCGCGAATCTGCTT
ACCAGTTGGAAATTAAGAGGTTGTGCGAAGAGACCGATGAACTTAAGGAA
CTTTTGGTTGATGTCGAGAATGAGAAGAATGCTTTGGAGGAGAGTGCTAA
GGGTGAGAGTAAACAACTATCGGATGATTTATTACAAACGAAATCGAAGC
TGAGAGAATCTGAGGGGAAAGTGAAAGACCTGAAGGAGAGAGTTTCGGTT
TTGAAAGAAACTGCTTCAGAGGGTGACGGACTTTTCAAGAATCTTTATGA
TGGCTTGGTTGAGATTTTGAACCAATTGTTGAGCGTACAATGTAAAGTTG
TTATCATCAACGGGGAAGAGCAGACGGATTCGAAAATTGCCAAACCTGGT
GAAATGAGCTCTCCTTCGGACTGCTTGAAATTAACGACGCAAGTGAAACG
ACAAGTGCAAACGTTGAACGTTGCAGTTGAGAAAACGATGAATAAACAGA
AAACATCATCAGCGAAGGAGGGTGACACAAACGGAGAGCAAAACAATGAT
ATCATAGCAGAGAATGCGTTGTTAAAAGAACAAATCTTGAAACTGAAATC
TTTGGTTACTACCAAACGTGAGCAGATTAGTACACTGCGAACTGTTTTAA
AAGCGAATAAATCAACTTATGAGGTTGCATTGGCCAATTTAAAAAGCCGC
TATGAGAATGATAAACAGATTCAAAGTGAAGCGAACGGACAGCTCAAGAA
ACAGATCAAATCATTGAAATCTGAGTGTCAGACTTTTGCGTCTTTACGTA
GTATGTTTGCGTCACGTTGCGAAGAATACTTGAAGGAGCTACACGAGAAA
CAAAAAGCTATTCTAGCAGCTGAGGAAGAGAAACGAACCTTAAATCAACT
TCTTAAACAGGCTATACACCAAAAGGTTGCCTTAACTCAGCGTGTTGAGG
AGTTCGAAATCGCTCGTGAGCGTTTGAGACAGTTTACTAAAAAGAACGCT
AAATCAGTTCCGAGTGGGGCCTCTGCAACCGGCGCTACTGGACCAGCAAA
TGGTGCTGGACCCAAAGGGCCAAATAAGGGTCAGAGACCAGGTAATGGTC
CTAGAGGACCCCCTAGACCTGTTACAAGACTGTAA Coding sequence (CDS) from alignment at sc0000086_pilon:268206..271340+ >XLOC_039305 ID=XLOC_039305|Name=XLOC_039305|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3588bp|location=Sequence derived from alignment at sc0000086_pilon:268206..271340+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATGAGAATCGAATACTGAAGAACAAAGAAGCTCGTTTCAATGAAGA
ATACAATACATTGGAGGAAGAAAATACttctttacagaaaaacttGTCAC
GTGCTAAACAAACCATGGTCGAATTCGAAGGATTGAAAGTAGAAAATCAA
AGTCTTTTAGACGagATGCATGAGAATCGAATACTGAAGAACAAAGAAGC
TCGTTTCAATGAAGAATACAATACATTGGAGGAAGAAAATACttctttac
agaaaaacttGTCACGTGCTAAACAAACCATGGTCGAATTCGAAGGATTG
AAAGTAGAAAATCAAAGTCTTTTAGACGagATTGACAGCTTACGATTACA
ATTACAAATGGCATCCAGCGCACGTGATCAATTCGAAAAACAGTTGCACG
AAAGTCTTGAATCACTAAAAGAACAGCGCGAAAAAATCACTCACAATCAG
AGAGAAATTAATGAGCTTAAACAACAAGCTATTGCACAGAAATGCGGCAT
GGTTTACGGAAAAGATTGACAGCTTACGATTACAATTACAAATGGCATCC
AGCGCACGTGATCAATTCGAAAAACAGTTGCACGAAAGTCTTGAATCACT
AAAAGAACAGCGCGAAAAAATCACTCACAATCAGAGAGAAATTAATGAGC
TTAAACAACAAGCTATTGCACAGAAATGCGGCATGGTTTACGGAAAAGGT
GACTTCAATGGGCGTATTGACATGGATGGTGGCGGTGAACATCCTTTGGT
GAGACAAATTGAACAAGAATACAAGACAACGCATCCTTCGCCAAGCCCAg
GTGACTTCAATGGGCGTATTGACATGGATGGTGGCGGTGAACATCCTTTG
GTGAGACAAATTGAACAAGAATACAAGACAACGCATCCTTCGCCAAGCCC
AgCCGTGGTAGATGACATCCTTAAAGAATTACAGGGTGGAGAAGTTCGCG
ATCTAGAAGAACAGTTACGGGTAGTTCAAGAAGAAAAAGAGCACTTGGAA
AAAGAGCTAACAAGACAAGCCTCTAACGCCGATATAGTTGCTGATGCTAC
GTCCCTTCTCCGTAGAGGCTCTAGTGGGAATGTATCTGAAGAAGGAGATG
AGTATACCTTGAATAATCAGTTGCAGGAATTATCGGACGTCCGTAGTCGC
GAATCTGCTTACCAGTTGGAAATTAAGAGGTTGTGCGAAGAGACCGATGA
ACTTAAGGAACTTTTGGTTGATGTCGAGAATGAGAAGAATGCTTTGGAGG
AGAGTGCTAAGGGTGAGAGTAAACAACTATCGGATGATTTATTACAAACG
AAATCGAAGCTGAGAGAATCTGAGGGGAAAGTGAAAGACCTGAAGGAGAG
AGTTTCGGTTTTGAAAGAAACTGCTTCAGAGGGTGACGGACTTTTCAAGA
ATCTTTATGATGGCTTGGTTGAGATTTTGAACCAATTGTTGAGCGTACAA
TGTAAAGTTGTTATCATCAACGGGGAAGAGCAGACGGATTCGAAAATTGC
CAAACCTGGTGAAATGAGCTCTCCTTCGGACTGCTTGAAATTAACGACGC
AAGTGAAACGACAAGTGCAAACGTTGAACGTTGCAGTTGAGAAAACGATG
AATAAACAGAAAACATCATCAGCGAAGGAGGGTGACACAAACGGAGAGCA
AAACAATGATATCATAGCAGAGAATGCGTTGTTAAAAGAACAAATCTTGA
AACTGAAATCTTTGGTTACTACCAAACGTGAGCAGATTAGTACACTGCGA
ACTGTTTTAAAAGCGAATAAATCAACTTATGAGGTTGCATTGGCCAATTT
AAAAAGCCGCTATGAGAATGATAAACAGATTCAAAGTGAAGCGAACGGAC
AGCTCAAGAAACAGATCAAATCATTGAAATCTGAGTGTCAGACTTTTGCG
TCTTTACGTAGTATGTTTGCGTCACGTTGCGAAGAATACTTGAAGGAGCT
ACACGAGAAACAAAAAGCTATTCTAGCAGCTGAGGAAGAGAAACGAACCT
TAAATCAACTTCTTAAACAGGCTATACACCAAAAGGTTGCCTTAACTCAG
CGTGTTGAGGAGTTCGAAATCGCTCGTGAGCGTTTGAGACAGTTTACTAA
AAAGAACGCTAAATCAGTTCCGAGTGGGGCCTCTGCAACCGGCGCTACTG
GACCAGCAAATGGTGCTGGACCCAAAGGGCCAAATAAGGGTCAGAGACCA
GGTAATGGTCCTAGAGGACCCCCTAGACCTGTTACAAGACTGTAACCGTG
GTAGATGACATCCTTAAAGAATTACAGGGTGGAGAAGTTCGCGATCTAGA
AGAACAGTTACGGGTAGTTCAAGAAGAAAAAGAGCACTTGGAAAAAGAGC
TAACAAGACAAGCCTCTAACGCCGATATAGTTGCTGATGCTACGTCCCTT
CTCCGTAGAGGCTCTAGTGGGAATGTATCTGAAGAAGGAGATGAGTATAC
CTTGAATAATCAGTTGCAGGAATTATCGGACGTCCGTAGTCGCGAATCTG
CTTACCAGTTGGAAATTAAGAGGTTGTGCGAAGAGACCGATGAACTTAAG
GAACTTTTGGTTGATGTCGAGAATGAGAAGAATGCTTTGGAGGAGAGTGC
TAAGGGTGAGAGTAAACAACTATCGGATGATTTATTACAAACGAAATCGA
AGCTGAGAGAATCTGAGGGGAAAGTGAAAGACCTGAAGGAGAGAGTTTCG
GTTTTGAAAGAAACTGCTTCAGAGGGTGACGGACTTTTCAAGAATCTTTA
TGATGGCTTGGTTGAGATTTTGAACCAATTGTTGAGCGTACAATGTAAAG
TTGTTATCATCAACGGGGAAGAGCAGACGGATTCGAAAATTGCCAAACCT
GGTGAAATGAGCTCTCCTTCGGACTGCTTGAAATTAACGACGCAAGTGAA
ACGACAAGTGCAAACGTTGAACGTTGCAGTTGAGAAAACGATGAATAAAC
AGAAAACATCATCAGCGAAGGAGGGTGACACAAACGGAGAGCAAAACAAT
GATATCATAGCAGAGAATGCGTTGTTAAAAGAACAAATCTTGAAACTGAA
ATCTTTGGTTACTACCAAACGTGAGCAGATTAGTACACTGCGAACTGTTT
TAAAAGCGAATAAATCAACTTATGAGGTTGCATTGGCCAATTTAAAAAGC
CGCTATGAGAATGATAAACAGATTCAAAGTGAAGCGAACGGACAGCTCAA
GAAACAGATCAAATCATTGAAATCTGAGTGTCAGACTTTTGCGTCTTTAC
GTAGTATGTTTGCGTCACGTTGCGAAGAATACTTGAAGGAGCTACACGAG
AAACAAAAAGCTATTCTAGCAGCTGAGGAAGAGAAACGAACCTTAAATCA
ACTTCTTAAACAGGCTATACACCAAAAGGTTGCCTTAACTCAGCGTGTTG
AGGAGTTCGAAATCGCTCGTGAGCGTTTGAGACAGTTTACTAAAAAGAAC
GCTAAATCAGTTCCGAGTGGGGCCTCTGCAACCGGCGCTACTGGACCAGC
AAATGGTGCTGGACCCAAAGGGCCAAATAAGGGTCAGAGACCAGGTAATG
GTCCTAGAGGACCCCCTAGACCTGTTACAAGACTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:268206..271340 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 454-1794:1795 |
| Aaloc | 352-450:1245 |
| Aaloc | 166-348:854 |
| Aaloc | 1-165:1 |
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