XLOC_039259 (mRNA) -

Overview
NameXLOC_039259
Unique NameXLOC_039259
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000064_pilon:1618610..1619569-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039259 ID=XLOC_039259|Name=XLOC_039259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=960bp|location=Sequence derived from alignment at sc0000064_pilon:1618610..1619569- (Clytia hemisphaerica_ch_hm2_pilon)
CCGAGTGGTGAGGATGCTCTGAAGCTGAAAAGGGAATCTAATATCAATTT TAACAACAAATCTCCATCTATCTCTTCAATCTCTCAAACAAATCAACCAA GAAGTACTTCAACTGAACCTACAACAATACAATATTTATTTTTCCTTCTA ATTTCTGCTCTTTCGACCAATTCAACCATGGAATTTGAAACCTTCAAAAA TGACATCATCAATACCTTGGACAACAAACTTGATGGTCTCAAGATCTATA TCAACAACAAAATACATGAACTTAGAACTGAATATGATGAAAAAATAACA GCTCTCCATAACAAGATAAATGAACTTGAAGCTCAGGTGAAACATCCATG GGCTGATAGTTATAATGATGCCAATCCTGAAGCTGATGCCGAACCCAACA AACCAAACGTAAATAAACAACTCCAGCAACTCATCAACAAAGTGGTGAGT CTTGAAGATCACCAAGAAGAACAAATTGATAGGACACTACGGTTCACCCT GATTTTCCGCAACGTTAAATATGACCCACAATCCGAAACCGATGCCAACA AAACGATAGACCTATTAGCAAATACCATAAACAGTCACTGTCCCACCCTT GGAACAGAATATATAAAGAATGCCGTTGAACGAGGTCACCGCAACTTTAA ACAAAATAGAGTGACCAATGATCGTAATCGAAACTCATTTCCGTCAATCA GTGTGAAATTTTTATCTTGGAAGGACTCAAGTGATATCCTGTCAACTATC ATTAAAGCCAACAAAAATGGTCGTGAGCATCTTTCCGTTTCTCAACAATT TTCAAAAGGAACTACTCAGAGGCGAAATAACGCCCTGAAACAAAGGAAAC TCTTGTCTGATACCAACAAAAACATGGAGTATAGACTAATCTATCCAGCC ACCCTCACTGGGAGGGTCAAAAACTCCAACACAAAATTTGAATTGATTGA AAAGTTTTAG

Coding sequence (CDS) from alignment at sc0000064_pilon:1618610..1619569-

>XLOC_039259 ID=XLOC_039259|Name=XLOC_039259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000064_pilon:1618610..1619569- (Clytia hemisphaerica_ch_hm2_pilon)
CCGAGTGGTGAGGATGCTCTGAAGCTGAAAAGGGAATCTAATATCAATTT
TAACAACAAATCTCCATCTATCTCTTCAATCTCTCAAACAAATCAACCAA
GAAGTACTTCAACTGAACCTACAACAATACAATATTTATTTTTCCTTCTA
ATTTCTGCTCTTTCGACCAATTCAACCATGGAATTTGAAACCTTCAAAAA
TGACATCATCAATACCTTGGACAACAAACTTGATGGTCTCAAGATCTATA
TCAACAACAAAATACATGAACTTAGAACTGAATATGATGAAAAAATAACA
GCTCTCCATAACAAGATAAATGAACTTGAAGCTCAGGTGAAACATCCATG
GGCTGATAGTTATAATGATGCCAATCCTGAAGCTGATGCCGAACCCAACA
AACCAAACGTAAATAAACAACTCCAGCAACTCATCAACAAAGTGGTGAGT
CTTGAAGATCACCAAGAAGAACAAATTGATAGGACACTACGGTTCACCCT
GATTTTCCGCAACGTTAAATATGACCCACAATCCGAAACCGATGCCAACA
AAACGATAGACCTATTAGCAAATACCATAAACAGTCACTGTCCCACCCTT
GGAACAGAATATATAAAGAATGCCGTTGAACGAGGTCACCGCAACTTTAA
ACAAAATAGAGTGACCAATGATCGTAATCGAAACTCATTTCCGTCAATCA
GTGTGAAATTTTTATCTTGGAAGGACTCAAGTGATATCCTGTCAACTATC
ATTAAAGCCAACAAAAATGGTCGTGAGCATCTTTCCGTTTCTCAACAATT
TTCAAAAGGAACTACTCAGAGGCGAAATAACGCCCTGAAACAAAGGAAAC
TCTTGTCTGATACCAACAAAAACATGGAGTATAGACTAATCTATCCAGCC
ACCCTCACTGGGAGGGTCAAAAACTCCAACACAAAATTTGAATTGATTGA
AAAGTTTTAGCCGAGTGGTGAGGATGCTCTGAAGCTGAAAAGGGAATCTA
ATATCAATTTTAACAACAAATCTCCATCTATCTCTTCAATCTCTCAAACA
AATCAACCAAGAAGTACTTCAACTGAACCTACAACAATACAATATTTATT
TTTCCTTCTAATTTCTGCTCTTTCGACCAATTCAACCATGGAATTTGAAA
CCTTCAAAAATGACATCATCAATACCTTGGACAACAAACTTGATGGTCTC
AAGATCTATATCAACAACAAAATACATGAACTTAGAACTGAATATGATGA
AAAAATAACAGCTCTCCATAACAAGATAAATGAACTTGAAGCTCAGGTGA
AACATCCATGGGCTGATAGTTATAATGATGCCAATCCTGAAGCTGATGCC
GAACCCAACAAACCAAACGTAAATAAACAACTCCAGCAACTCATCAACAA
AGTGGTGAGTCTTGAAGATCACCAAGAAGAACAAATTGATAGGACACTAC
GGTTCACCCTGATTTTCCGCAACGTTAAATATGACCCACAATCCGAAACC
GATGCCAACAAAACGATAGACCTATTAGCAAATACCATAAACAGTCACTG
TCCCACCCTTGGAACAGAATATATAAAGAATGCCGTTGAACGAGGTCACC
GCAACTTTAAACAAAATAGAGTGACCAATGATCGTAATCGAAACTCATTT
CCGTCAATCAGTGTGAAATTTTTATCTTGGAAGGACTCAAGTGATATCCT
GTCAACTATCATTAAAGCCAACAAAAATGGTCGTGAGCATCTTTCCGTTT
CTCAACAATTTTCAAAAGGAACTACTCAGAGGCGAAATAACGCCCTGAAA
CAAAGGAAACTCTTGTCTGATACCAACAAAAACATGGAGTATAGACTAAT
CTATCCAGCCACCCTCACTGGGAGGGTCAAAAACTCCAACACAAAATTTG
AATTGATTGAAAAGTTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039259XLOC_039259-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000064_pilongenomesc0000064_pilon:1618610..1619569 -
Properties
Property NameValue
Aaloc1-960:961