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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000027_pilon:155361..158870- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039251 ID=XLOC_039251|Name=XLOC_039251|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3510bp|location=Sequence derived from alignment at sc0000027_pilon:155361..158870- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACCGGTAATCAAACTAACATTAAACTTGTACTCAAGAATGATAC
ATGGGTCCCAAAGAAAAGTAATCACACAAGGTTAGAAAATCCATTCGTCA
TCATTTTTGCAATTTGTTACCTTAAGGGAACTTATTTTGGCGGGAACTAA
TTTTGGCGGGAACTAATTTTGGCGAATGCCAGCGTAAATCTGTTCTATTT
TGCCTTATTTTGAGCAATTTTGATGAATTTCAAGGGTTATTTAGGCGAAA
TTGACGGGAACTTATTTTGGCGATTGAGCAAAATATTTAATTTTGGCGGG
AACTAATTTTAGCGAAGTTCGTCTAAATTCGCCAAATCTGCCAAAATTAG
TTCCCGCCAAAATAAGTTCCCTTAAGGTATTCCTTCTCAGCTCTTTTCTT
CGTTGTGAACGTAGAGATATTTGAGGGGGTTAATCTAAAGAATCCAACAT
TTACTAGAAATAGACAAAAAGAACGACAAATTTCGCTGTCCACACCCCCG
ACCCGGTTAGTTAATCCACCCCACAGATTTCTGTAAAGCCCGAAGTGCTA
GATAAAGTGAACTAAATATGATCGTCCAGGATCGAAATTTTCGAGGATGC
ATTTTCTAAAAATCACCATTTTTCTACATCGATGCTATAATGTTTACTCA
ATTTACCATCCGTACGCAATAACACGATTTGAGTTCTGCTGAGCAATGTT
GTTTATATATTTCTTAACGTTTTCAGTGCCCTCGATCAGCATGGTTTAGA
CATGAAGAAAGTTCTTGGAGAAGGAGCATTTGCCAAAGTGAAACAAGCTT
TTTCCCATAAAGAGAAAAGAGAAGTTGCGGTCAAAGTATTCGAGAAACGT
CGATTACCTTTCGATTATTTGAAACGATTCTTACCGAGAGAAATTCGCGT
CTTGAATGCATTGCAACATCCTAATTTGGTAAGATATACACGTTACACAT
ATTTTTTTCGTAAGAACAATCTTATAATAACATAGGACTCAATTTTTTAT
TGTTAAGAACAATTTCAGACTCAACTTGAAGTTGATGGATACCAATTACT
GGATACTCTGAAAAGCGAACATTCTTCGATAGATATCAGCTTTTCACCTT
GAATTTGAGCGGCTAGTTTTTTTTTAGATTTTTTTTCCTGGAACTTTCTT
CAAGAAGGACATTTCTAAGCATTCGTTAGATTTGTAATTTTGTACTTTTC
TACTTATCTCAGGTCTCCTTACTTGATGTTTTCGAAACAACATCTCGAGT
TTATCTCGTTCTTGAGTTTGCTGAGGGTGGAGATTTGTTGGAATTTATCA
ACCAAGATTCTTATAAGAATGAAGCTCATGTGAAACGTCATTTCCAACAA
TTAATTGCTGGAATGAGTTCGATGCATGGTCAAGGGATTGTTCACCGAGA
TTTGAAATGCGAAAATATTTTATTGGACGCTCGTAACAATGTTAAAATTG
CTGGTAAGTTCAATGAAAGATCCTTTTAGTAAACAGTGGGAGGAATAACT
ATAAACTAAAAGGAGATCTCCGTGATCATGTTTTATGTTATACAATTATA
TGGTGAAGATCAGAGATCTGACCTCAAGGAAAGAAAGTGTTGAAAATACT
AAATAAAATGAGAATGAAACGTAAAAAGGCACTAATATTTTTATAATTAT
ACGTTTTTTTCCCATTTTTTTGAATTTTTCTAAATGTATAAATCAAACCA
ATCAAACATTCTGTCAAGAAATGAGAATTTTATGCGAAGAAGAACCAACA
AACCAATAGACATAAAGTTTAAAAAGCCAAGCAGAAAAACGCAAACCTGC
GAATTTCGAGTAATTTCTTTCATTATTCGATTTCAGATTTTGGTTTTGCT
CGATTTACTGAAGCAGACGTGCTGCTGAAAACTATTTGTGGATCTTTCGT
TTACACCGCTCCAGAACTGATAGCAGGAGAACAAGATTATAGTGGCTTTC
TTGCAGACGCTTGGAGTGCTGGTATCATTCTGTTTTGCATGCTATGTAGG
AAACTACCATTCACTAAAGATGAGTTGAATTTGATTGCTAAAGGGAAGAA
TTTGTTGGATAGACTTGAATTCCCTCATGCTATCACACACGGTAAGCGAT
GTAACCTTAAAGTTTTATTTTCCCAAAGTTAATGTGGCATAAATGTATAA
GTTCAAGGTCATTTCATGATTGTGTCTAACATGAAAGTAAAAGTAATGTT
TTGTACCACGTGACTTTATAAATATAGGTAGTATTTTCGGTACTTCTATT
TTCCAAAGTTTATGTTCACGAAAAAGATTTATGCGCGAAATTCGGTAAAT
TTAACTTGTAAATTTCGCGATTTATTGGCAACGTGAAAGCTTCTGTTAAT
TTTGTATATTTAAAAATCCCTTTTATATAGACGCTCGTGACGTGGTGTAC
GGTTTATTGGAACAAGATCCACTGAACCGTTTGAACGCTTTCACCGTTCA
AAAACATAAATGGTGTCATGGTTTCAAATCGGATCAAAAGCCTTACCAAC
AAAAAGGTAGATGTCTTTGTTTTTTACGTTTCGCATTTTCGACTACTAAA
ATTTTCATCTGACATCAATAAAATCGCAAAAGTGTTTTTTAATAAGTACC
ACGGTTGGGGAAAGTATATAGAGTATTCAAGTATTCTATCGCTTACATCA
TTATCGGACCTTCAAATGACCAAATTTTCGTAAGAAAGGACGGTGGCAGT
TAGTGGCAACTACGACCTTGTTTATTCTCACCCCTATTTTTCCGTGATTA
TTTGGAAAGATCTAAATCTCTCTCTTTTGAATATTAGGTCGCACAAAGAG
CTAAGTAATTGAAGCAATTTGATGTAATAACTTTTTTTCTTTTCTCATCA
TTTACAGGCAAAGCCATCGACATCATTGAAGCGCCAAATACGATTGCTAA
CAGTACTCGTGCTGAAAACGATCGCGCGCACATGCTATTCGAAGTTGTGC
GTCCGCAAGGCAAATTTGTTCGTGCTATTGAAAGACAACGGTTCAACCTT
TTAGCTTTGAGTGTGTTCTCGAAGAACAAAAAGAGCGCCCCACCTGACGC
CCGTTTGTCATGTGTTCTATCACAATCACTACTGAAGCCGCCCACAAATG
CCCGCCAGAGGTTCAATCTAGTGACTAGTCTAGTCAAATGCGCCAATTCG
CTTGCTAGTGAGCGGAGAGCAACTACAGCTAGTAAAAATCAAAAAAAATC
CCAAGGTCGAACTATACTTAAAGATGTCGAGATGAAACAAAAATCACCTC
CTGGAAAATCTAAGATGAATTCAGCTGACTCAATTTCCCAAGTGGGCTAC
GAAGACTTTTTGAGTAAAAAGCAAAGTGAACGAGGCAAAGAATTGCAAAA
TGTGGGTCGTTCCGCTGGCTCTAACGTAGCGAAAAGAGCTGCTACCGTTA
AGCAAACATCTTACAAAGGGAAACCGGGCACACAGGCTGAGGAGCCAAAC
CTTAATCAAGAATCTTGGAACAAGAAATGTGTCGTGGCTTGCAAAACTTC
TCGACGTTGA Coding sequence (CDS) from alignment at sc0000027_pilon:155361..158870- >XLOC_039251 ID=XLOC_039251|Name=XLOC_039251|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3114bp|location=Sequence derived from alignment at sc0000027_pilon:155361..158870- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACCGGTAATCAAACTAACATTAAACTTGTACTCAAGAATGATAC
ATGGGTCCCAAAGAAAAGTAATCACACAAGATGTCTACCGGTAATCAAAC
TAACATTAAACTTGTACTCAAGAATGATACATGGGTCCCAAAGAAAAGTA
ATCACACAAGTGCCCTCGATCAGCATGGTTTAGACATGAAGAAAGTTCTT
GGAGAAGGAGCATTTGCCAAAGTGAAACAAGCTTTTTCCCATAAAGAGAA
AAGAGAAGTTGCGGTCAAAGTATTCGAGAAACGTCGATTACCTTTCGATT
ATTTGAAACGATTCTTACCGAGAGAAATTCGCGTCTTGAATGCATTGCAA
CATCCTAATTTGTGCCCTCGATCAGCATGGTTTAGACATGAAGAAAGTTC
TTGGAGAAGGAGCATTTGCCAAAGTGAAACAAGCTTTTTCCCATAAAGAG
AAAAGAGAAGTTGCGGTCAAAGTATTCGAGAAACGTCGATTACCTTTCGA
TTATTTGAAACGATTCTTACCGAGAGAAATTCGCGTCTTGAATGCATTGC
AACATCCTAATTTGGTCTCCTTACTTGATGTTTTCGAAACAACATCTCGA
GTTTATCTCGTTCTTGAGTTTGCTGAGGGTGGAGATTTGTTGGAATTTAT
CAACCAAGATTCTTATAAGAATGAAGCTCATGTGAAACGTCATTTCCAAC
AATTAATTGCTGGAATGAGTTCGATGCATGGTCAAGGGATTGTTCACCGA
GATTTGAAATGCGAAAATATTTTATTGGACGCTCGTAACAATGTTAAAAT
TGCTGGTCTCCTTACTTGATGTTTTCGAAACAACATCTCGAGTTTATCTC
GTTCTTGAGTTTGCTGAGGGTGGAGATTTGTTGGAATTTATCAACCAAGA
TTCTTATAAGAATGAAGCTCATGTGAAACGTCATTTCCAACAATTAATTG
CTGGAATGAGTTCGATGCATGGTCAAGGGATTGTTCACCGAGATTTGAAA
TGCGAAAATATTTTATTGGACGCTCGTAACAATGTTAAAATTGCTGATTT
TGGTTTTGCTCGATTTACTGAAGCAGACGTGCTGCTGAAAACTATTTGTG
GATCTTTCGTTTACACCGCTCCAGAACTGATAGCAGGAGAACAAGATTAT
AGTGGCTTTCTTGCAGACGCTTGGAGTGCTGGTATCATTCTGTTTTGCAT
GCTATGTAGGAAACTACCATTCACTAAAGATGAGTTGAATTTGATTGCTA
AAGGGAAGAATTTGTTGGATAGACTTGAATTCCCTCATGCTATCACACAC
GATTTTGGTTTTGCTCGATTTACTGAAGCAGACGTGCTGCTGAAAACTAT
TTGTGGATCTTTCGTTTACACCGCTCCAGAACTGATAGCAGGAGAACAAG
ATTATAGTGGCTTTCTTGCAGACGCTTGGAGTGCTGGTATCATTCTGTTT
TGCATGCTATGTAGGAAACTACCATTCACTAAAGATGAGTTGAATTTGAT
TGCTAAAGGGAAGAATTTGTTGGATAGACTTGAATTCCCTCATGCTATCA
CACACGACGCTCGTGACGTGGTGTACGGTTTATTGGAACAAGATCCACTG
AACCGTTTGAACGCTTTCACCGTTCAAAAACATAAATGGTGTCATGGTTT
CAAATCGGATCAAAAGCCTTACCAACAAAAAGACGCTCGTGACGTGGTGT
ACGGTTTATTGGAACAAGATCCACTGAACCGTTTGAACGCTTTCACCGTT
CAAAAACATAAATGGTGTCATGGTTTCAAATCGGATCAAAAGCCTTACCA
ACAAAAAGGCAAAGCCATCGACATCATTGAAGCGCCAAATACGATTGCTA
ACAGTACTCGTGCTGAAAACGATCGCGCGCACATGCTATTCGAAGTTGTG
CGTCCGCAAGGCAAATTTGTTCGTGCTATTGAAAGACAACGGTTCAACCT
TTTAGCTTTGAGTGTGTTCTCGAAGAACAAAAAGAGCGCCCCACCTGACG
CCCGTTTGTCATGTGTTCTATCACAATCACTACTGAAGCCGCCCACAAAT
GCCCGCCAGAGGTTCAATCTAGTGACTAGTCTAGTCAAATGCGCCAATTC
GCTTGCTAGTGAGCGGAGAGCAACTACAGCTAGTAAAAATCAAAAAAAAT
CCCAAGGTCGAACTATACTTAAAGATGTCGAGATGAAACAAAAATCACCT
CCTGGAAAATCTAAGATGAATTCAGCTGACTCAATTTCCCAAGTGGGCTA
CGAAGACTTTTTGAGTAAAAAGCAAAGTGAACGAGGCAAAGAATTGCAAA
ATGTGGGTCGTTCCGCTGGCTCTAACGTAGCGAAAAGAGCTGCTACCGTT
AAGCAAACATCTTACAAAGGGAAACCGGGCACACAGGCTGAGGAGCCAAA
CCTTAATCAAGAATCTTGGAACAAGAAATGTGTCGTGGCTTGCAAAACTT
CTCGACGTTGAGCAAAGCCATCGACATCATTGAAGCGCCAAATACGATTG
CTAACAGTACTCGTGCTGAAAACGATCGCGCGCACATGCTATTCGAAGTT
GTGCGTCCGCAAGGCAAATTTGTTCGTGCTATTGAAAGACAACGGTTCAA
CCTTTTAGCTTTGAGTGTGTTCTCGAAGAACAAAAAGAGCGCCCCACCTG
ACGCCCGTTTGTCATGTGTTCTATCACAATCACTACTGAAGCCGCCCACA
AATGCCCGCCAGAGGTTCAATCTAGTGACTAGTCTAGTCAAATGCGCCAA
TTCGCTTGCTAGTGAGCGGAGAGCAACTACAGCTAGTAAAAATCAAAAAA
AATCCCAAGGTCGAACTATACTTAAAGATGTCGAGATGAAACAAAAATCA
CCTCCTGGAAAATCTAAGATGAATTCAGCTGACTCAATTTCCCAAGTGGG
CTACGAAGACTTTTTGAGTAAAAAGCAAAGTGAACGAGGCAAAGAATTGC
AAAATGTGGGTCGTTCCGCTGGCTCTAACGTAGCGAAAAGAGCTGCTACC
GTTAAGCAAACATCTTACAAAGGGAAACCGGGCACACAGGCTGAGGAGCC
AAACCTTAATCAAGAATCTTGGAACAAGAAATGTGTCGTGGCTTGCAAAA
CTTCTCGACGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000027_pilon | genome | sc0000027_pilon:155361..158870 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 907-1557:652 |
| Aaloc | 781-903:1129 |
| Aaloc | 526-777:1673 |
| Aaloc | 283-522:2299 |
| Aaloc | 82-282:2784 |
| Aaloc | 1-78:3511 |
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