XLOC_039240 (mRNA) -

Overview
NameXLOC_039240
Unique NameXLOC_039240
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000027_pilon:576813..578021-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039240 ID=XLOC_039240|Name=XLOC_039240|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1209bp|location=Sequence derived from alignment at sc0000027_pilon:576813..578021- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGAACTAATATTAAAACAAACAATACAAAATAAAAATACATTATT ACGTCATGCGCTGCAACCACAATGTTGCGCATGTGCAGTACGTCACATTA TGAGGAAACCCCTCACCAAGCTTCCCAACCAATCAACGAAGGGCACCAAA ATGAAGAAATATGTTGTACCACCGCATAGGATTGGTGTAATCAAAGGCCA TGATTCACATCATACTGGTAAGATAGACTTCGTTTTTAATAGTAGGGGGT TCCTTTATGATTTGTACCATCTTCCGTGCAGCCCTCGAATTTCAGGTCGG CATTCGGCAGTGCCGACCTAAAAGCCGACCAAAGAGTGCGTATGGTCGGC AGTTCATTGCCGACCATATTCATTGATTCTCTCGGCAGCCGACCATAAGT TATCTTTTAGGTCAGCAAAGCCGACCTTAACAGCAACTGTAACTGTAAAA TGAAAGTCTCTAATAAGAACCATATCGCACTCAAATAAAAAAACAAACAT TGCCGTAGCCTTTAAACAACTTTGCCGACCTAAAATATAGCTCAGATCGG CATTGCCGACCTAAAAACAAGCTTAGGTCGGCAAAATTTTGCCGGCCTCC GGCCGGATTTGGACGGCACTTACGTGCCGACTTACTTTTACTTGAATTTC GAGGGCTGTCCGTGGGACTCAATCGCATTGGTTAGAAATAGATAGGATTT TGAAACTTTTTTGAGAGGGCCGTGAACTAGAGTTTTCAAAGTTGAAAATT GGAAAGTTATGTTAGTCAACGGGTTTTGACATTCCCTGGGCTATTATGTA TGTATTTATGAATGTTGGGATCCTTTTTTAGAAGTATTTATCCTTCTTTT GAACTTTCGATAGCCTCTTATGCTTTTCGAGGGTCCGGCACTTTCTATTT TGTTGACACTTATACCATTATTTTATTTAAGGTGGTTTGAAAGGAAGTCA TTGGGCTGCCGAAAGATTTGCCGACGATATCATGATTCGACGTTTTATCG AAGGAACATTTTACCAACATATTACGTCTGACGTTATTATTAAACGACGT TTGAACGAAATTATCGTCACGTTTTTCGTAACGGGGCGTGGAGCTGACGG GACAACGGCTAAAGTGTATTTCCTGAAAGCGTTTACAGAAAAACTTTTAT CTGAGATGATGGGTTGTATTGTGAAAATGGAACTACGGACTGGACCCGAA TTTGTGTGA

Coding sequence (CDS) from alignment at sc0000027_pilon:576813..578021-

>XLOC_039240 ID=XLOC_039240|Name=XLOC_039240|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=990bp|location=Sequence derived from alignment at sc0000027_pilon:576813..578021- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGAACTAATATTAAAACAAACAATACAAAATAAAAATACATTATT
ACGTCATGCGCTGCAACCACAATGTTGCGCATGTGCAGTACGTCACATTA
TGAGGAAACCCCTCACCAAGCTTCCCAACCAATCAACGAAGGGCACCAAA
ATGAAGAAATATGTTGTACCACCGCATAGGATTGGTGTAATCAAAGGCCA
TGATTCACATCATACTGATGTTTGAACTAATATTAAAACAAACAATACAA
AATAAAAATACATTATTACGTCATGCGCTGCAACCACAATGTTGCGCATG
TGCAGTACGTCACATTATGAGGAAACCCCTCACCAAGCTTCCCAACCAAT
CAACGAAGGGCACCAAAATGAAGAAATATGTTGTACCACCGCATAGGATT
GGTGTAATCAAAGGCCATGATTCACATCATACTGGTGGTTTGAAAGGAAG
TCATTGGGCTGCCGAAAGATTTGCCGACGATATCATGATTCGACGTTTTA
TCGAAGGAACATTTTACCAACATATTACGTCTGACGTTATTATTAAACGA
CGTTTGAACGAAATTATCGTCACGTTTTTCGTAACGGGGCGTGGAGCTGA
CGGGACAACGGCTAAAGTGTATTTCCTGAAAGCGTTTACAGAAAAACTTT
TATCTGAGATGATGGGTTGTATTGTGAAAATGGAACTACGGACTGGACCC
GAATTTGTGTGAGTGGTTTGAAAGGAAGTCATTGGGCTGCCGAAAGATTT
GCCGACGATATCATGATTCGACGTTTTATCGAAGGAACATTTTACCAACA
TATTACGTCTGACGTTATTATTAAACGACGTTTGAACGAAATTATCGTCA
CGTTTTTCGTAACGGGGCGTGGAGCTGACGGGACAACGGCTAAAGTGTAT
TTCCTGAAAGCGTTTACAGAAAAACTTTTATCTGAGATGATGGGTTGTAT
TGTGAAAATGGAACTACGGACTGGACCCGAATTTGTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039240XLOC_039240-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000027_pilongenomesc0000027_pilon:576813..578021 -
Properties
Property NameValue
Aaloc220-495:277
Aaloc1-216:1210