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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1118248..1120162- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039172 ID=XLOC_039172|Name=XLOC_039172|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1915bp|location=Sequence derived from alignment at sc0000044_pilon:1118248..1120162- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTCTATTTCGGAGATTCAATTCACCAATTTGTCAACATCAAAGT
CAAAGAACGTCATGATTCCATCTTTGATCAAATCCCACGTATCTTTGTCT
GCAAATTATTCATCTTATCCGCCATGATTATGTCTATCACATGGTTTAAC
GACGAAGCTAGATGTATCCCACCTAAAGGTGACGCGAACAGACTACCAGC
GTATTTCATACATAGGGCATGTTGGCTGAAAGGGATTTACGTGTACCCGC
AACTACATCAGGAAACAGAATATGACGTATCTTATTACGGCGTACCGACA
GCACTGGAAAAAGACGGCGTTTTGGAAGATAAAGAAGATGAACTCTGCAA
AGTAGGTTGGCGTAACGAAAATTGTAAACCAATGGAACGAGAATATTTCC
ATCAATACAAATGGATTCCATTTTACGTGGCTTTCTTAGCATTCTTGTTC
TTCTATCCGTATATGATCTTCAAGATTTGCAACAGTGATTTCATCAACCT
TAAAAACAACCTTGGAAACCATGAGGTAATGATTAGTTTGATTCTAAAAA
ATTATTATTCTCAGCATTTCTTTACCTTTCTTTACACTTAACAAAGTTTT
TATTTGATGGTGAAACAAACACCTTAAGATAAATTCTTTACTAAAAGATT
CAAGTGTTGCCACAGCTCAATATTTTACACCTTTGATAAACTAGTTCCAA
AGCCAGATTTCAGGGATGTGTTGGAATTGAATCTCACTAAATTACATCAA
CAATTCCAACCAATAAATCACCAAAGAATTTATCAAACTAACAAAGACTT
CTTTTCTATCATTTCACAGGTGTCAGCTGATCAAATCGTAGATGCATTTT
TCAACAACACAGATTCAGTTCGTAAAAGGCGTAACCATCTAAGAATCCTT
GGTAACTACATTGTCAAACTACTGTATTTCTTTAACGGAGTTATCGGCTT
TTTCATCATTGATCATTTGACACATAACCGTTTCAACAATCTTGGTAACG
AATGGACCTCATATTCCAAGGAAATCAGATTTGATGTGGACGAGAGTCTC
CTGGCAACACCTGCTAACAAGTTCTTACCAGTGTTTGGAATCTGCGAGCT
GATGGATGTCCGAGCTGACTCGACCCATTCACGTGCTGATAAGGTTCGCG
TTGTCTGTGAAATATCAACACAAATCATGTACCAGTACTGTTTTATCCTA
TACTGGTTCGTCCTCATTTTCTCAATGTGTTGTTCAGCTCTTGGTATCAT
CATCTACATTTGCAAACATTTGATCCTCTTGTTTGGACGCACCAAGAAAG
GACCAGGTCACATCCACAATCAATACTTATCTTTACGACAAGTTGAATAC
TTGGATATCATTCGTAGACGACATCTACCCATGTACACAACCATCCGTAA
AATGCTGAATGAAAGAGCCTTACAAGATGTTTGGCGTGAGAATTCAGGTA
TGCCAATTAATGGAAGTATGCCAGTCAATAATGCAGAATCACCAAAGTTG
ACAACCATGTATAAATTCCATGCTGTCTCGTCTATGGAAGCTATATAATC
AACCACCTTGACGACGAATACCATGAAGACACTGTAGGGCAGATTATTGG
ATGCTGACCCTCTGATCAAAACAGATCAGACACGCCTCGTTAGAAGTTTC
AAGTTGTTACGACGAATCCATTGAAAGGAATCCTCGGTCAAATCACAAAA
GACTGATTGACGTCTTTAAATTGAGAATAACTTTCGTATTACACACAGAC
TTTTTTACTTTTCTAAGCTTTAAAACGAAATTGGATATTGACCCATATTG
GTGTCATATAATAGTTTATGTAGTGATAAATTGTCCACTTCGGATCATTT
TTTTTTAGTTATCTTGATAAAATCTTTTAAACGCCTAGAGATAGAAATAT
CTTTTTTGTAGTTGA Coding sequence (CDS) from alignment at sc0000044_pilon:1118248..1120162- >XLOC_039172 ID=XLOC_039172|Name=XLOC_039172|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2274bp|location=Sequence derived from alignment at sc0000044_pilon:1118248..1120162- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTCTATTTCGGAGATTCAATTCACCAATTTGTCAACATCAAAGT
CAAAGAACGTCATGATTCCATCTTTGATCAAATCCCACGTATCTTTGTCT
GCAAATTATTCATCTTATCCGCCATGATTATGTCTATCACATGGTTTAAC
GACGAAGCTAGATGTATCCCACCTAAAGGTGACGCGAACAGACTACCAGC
GTATTTCATACATAGGGCATGTTGGCTGAAAGGGATTTACGTGTACCCGC
AACTACATCAGGAAACAGAATATGACGTATCTTATTACGGCGTACCGACA
GCACTGGAAAAAGACGGCGTTTTGGAAGATAAAGAAGATGAACTCTGCAA
AGTAGGTTGGCGTAACGAAAATTGTAAACCAATGGAACGAGAATATTTCC
ATCAATACAAATGGATTCCATTTTACGTGGCTTTCTTAGCATTCTTGTTC
TTCTATCCGTATATGATCTTCAAGATTTGCAACAGTGATTTCATCAACCT
TAAAAACAACCTTGGAAACCATGAGATGGCTTTCTATTTCGGAGATTCAA
TTCACCAATTTGTCAACATCAAAGTCAAAGAACGTCATGATTCCATCTTT
GATCAAATCCCACGTATCTTTGTCTGCAAATTATTCATCTTATCCGCCAT
GATTATGTCTATCACATGGTTTAACGACGAAGCTAGATGTATCCCACCTA
AAGGTGACGCGAACAGACTACCAGCGTATTTCATACATAGGGCATGTTGG
CTGAAAGGGATTTACGTGTACCCGCAACTACATCAGGAAACAGAATATGA
CGTATCTTATTACGGCGTACCGACAGCACTGGAAAAAGACGGCGTTTTGG
AAGATAAAGAAGATGAACTCTGCAAAGTAGGTTGGCGTAACGAAAATTGT
AAACCAATGGAACGAGAATATTTCCATCAATACAAATGGATTCCATTTTA
CGTGGCTTTCTTAGCATTCTTGTTCTTCTATCCGTATATGATCTTCAAGA
TTTGCAACAGTGATTTCATCAACCTTAAAAACAACCTTGGAAACCATGAG
GTGTCAGCTGATCAAATCGTAGATGCATTTTTCAACAACACAGATTCAGT
TCGTAAAAGGCGTAACCATCTAAGAATCCTTGGTAACTACATTGTCAAAC
TACTGTATTTCTTTAACGGAGTTATCGGCTTTTTCATCATTGATCATTTG
ACACATAACCGTTTCAACAATCTTGGTAACGAATGGACCTCATATTCCAA
GGAAATCAGATTTGATGTGGACGAGAGTCTCCTGGCAACACCTGCTAACA
AGTTCTTACCAGTGTTTGGAATCTGCGAGCTGATGGATGTCCGAGCTGAC
TCGACCCATTCACGTGCTGATAAGGTTCGCGTTGTCTGTGAAATATCAAC
ACAAATCATGTACCAGTACTGTTTTATCCTATACTGGTTCGTCCTCATTT
TCTCAATGTGTTGTTCAGCTCTTGGTATCATCATCTACATTTGCAAACAT
TTGATCCTCTTGTTTGGACGCACCAAGAAAGGACCAGGTCACATCCACAA
TCAATACTTATCTTTACGACAAGTTGAATACTTGGATATCATTCGTAGAC
GACATCTACCCATGTACACAACCATCCGTAAAATGCTGAATGTGTCAGCT
GATCAAATCGTAGATGCATTTTTCAACAACACAGATTCAGTTCGTAAAAG
GCGTAACCATCTAAGAATCCTTGGTAACTACATTGTCAAACTACTGTATT
TCTTTAACGGAGTTATCGGCTTTTTCATCATTGATCATTTGACACATAAC
CGTTTCAACAATCTTGGTAACGAATGGACCTCATATTCCAAGGAAATCAG
ATTTGATGTGGACGAGAGTCTCCTGGCAACACCTGCTAACAAGTTCTTAC
CAGTGTTTGGAATCTGCGAGCTGATGGATGTCCGAGCTGACTCGACCCAT
TCACGTGCTGATAAGGTTCGCGTTGTCTGTGAAATATCAACACAAATCAT
GTACCAGTACTGTTTTATCCTATACTGGTTCGTCCTCATTTTCTCAATGT
GTTGTTCAGCTCTTGGTATCATCATCTACATTTGCAAACATTTGATCCTC
TTGTTTGGACGCACCAAGAAAGGACCAGGTCACATCCACAATCAATACTT
ATCTTTACGACAAGTTGAATACTTGGATATCATTCGTAGACGACATCTAC
CCATGTACACAACCATCCGTAAAATGCTGAATAAATATCTTTTTTGTAGT
TGAAAATATCTTTTTTGTAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1118248..1120162 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1117-1137:22 |
| Aaloc | 526-1116:1097 |
| Aaloc | 1-525:1916 |
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