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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:85870..88356- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039132 ID=XLOC_039132|Name=XLOC_039132|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2487bp|location=Sequence derived from alignment at sc0000041_pilon:85870..88356- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAATAATATCAAAAGTATACACCACAACAATGTTTTTCCTGACAT
GATCGGCAAACCGTACCTCCTAGCAGAAACATCTTTACGTACAACTGATT
GGGGAGAACACTTTCAATTCCTCGATAACACTGAACTTGGAAACACTGTT
TTCAATAACACGATATTGGATGAGATTCACCCTAGTGTATTTTCTTGCAA
GAATCTTTTGTCAAAAAGTCAGTGTAAAAAAATAATAACAAAGGCAGAGA
AATTAAATTTTCAACTATGTTGTTATGGCGAAGAAAGAAATAATTCTCGT
CTAGTTTTGTTTGATGAGAACTTTGCTGACTTTCTTTGGAAAAATTTGTC
AGAACAATTTGTAGATAAATTAGGAGATAATCCAGTTCATCCTTTTGGTT
TTGATGCTTCAAGAGGCAATTGGAAATTATCTGGAATTAATCAAGCCATG
CGTTTAAACAGATACAGTGGGAAAAATAAGGAATTTTTTGGTCCGCACAG
AGATGCTCCATTCTGTCCTAATGGTGATAAAAGATCTTTGTATACTATGC
TCATCTATTTGAATGATGATTTTGAAGGAGGTCAAACAATTTTACATTTT
CCAAAAAACATTTCAACTGATACCAAAGGTCAAACAATCAGTAAAGAAAT
TCAATTTCATGGTAATATTTTTCATGGATTTGACCACATCTCCATTAAAC
CACAAACAGGTACATGTTTGATCTTCAAACAAAATATTCTGCATCAAGGT
TACCCTTTACATTCAGAAAGTACCAATTATAAATATATTATTAAAACTGA
TATTATGGTTGAGCGCCCTGTCAAACTTGGATTTTCTCCACCTGTGGCAG
AGCTTCAAGACTATTTTGAATGTCTTCAATTATTTCGAGAAGCTCAGCAA
TGTGAATTAGCTGAAAATACAGCAAGAGCTAATGACTGCTATGAAAAGAG
CTTGTCTATTCGATATAATTACCCTAACCAAGAACAATTTGAGGAAAACT
TACCCAGGCAACATAGGGATTTTTCAGATGTTGCAGCCCCTGACAAGGAT
AATAATTCAATGGAGGCTATTGAAAATTTGTCTTTACCAAACATTTTTTC
GAAAGAGATTTGGCTTAAAATAATGAAATATATTGTTGACATCAAGTCTT
TGAACAATCTCTGTAAAGTGTTTCCCTTCTTGAAGTCTGAGAAGAAAAAG
CTATTCTTTGATAGAGTTGTTCCTGAGACTATTTACAGTAGTGGTGTTTA
TACAAATTTTTCAATATCTCAAAATGTAAACTTTGTTAACAACAATATGA
ACGAATTTGCCAAAGTTGCAGCAGTGTATTCAATGTGTTTACTCGGAAAT
GCACCCAATGATAAACACTATTTGGTGAATTATGATAGAGAAACAAGGAG
TGCAACAACTGTTCAGTTAAGAGATCTTCTTTATGGTGTATTTGCTGAGG
AACCTGTCCACGGTACCATCTTCAAAGTAGCACAAAGAAAAAAGGAAAAA
GATCCAAATAAAGATTTGTATCACAGTGTTGATAGAAATTACATGGCAAA
GTACTTTGATCGAGATGATATTGGGATAGATATGCAATCTGAATTTAGAT
CAAAGATTACAATTTTGTCTGAAACAGGAGATGGAGACGATAGAGATAAC
CTCTTTGTAGACTTACCACTAGCTGTCAGGGATCTAGAAGTGAGGAATAT
GCTGAATTCCTATGATCGCTATTATGAATATTGTAAAAATGAGCTTCCTC
GTGATGAACCACATGATGAACTTTATGAGAAAGGAGCTAGAGATTTCAAA
CTCGTAACTTATTCTGAAGATGATGGTTTTTATCCAGATGATCAGGTTGA
ATGCAATAAGGGAGATCTTGACTGCTATAAAGATCGTGATAAAGAAAGTG
TTGTTTGGAGAAGTAATATATATGATGATTCTGATGGTGAAGACTTCCCA
TTTCAAAAGATTGAGAAGCAAAAATTGGTCGATGAAAACATTACAATACA
GAAAGATTGTTTTCCAGGTGCAGCTATTATTAGAAAAATGAATGAACCTA
CAAAGATTTCAAAAGAAGATGGCTATTGTACTTGTTTTATGTTTCAACAT
TTGGGAGGTAAGCACAGTAAAAACTGCTCTAGCCACGTGTTTAACCATTT
AGTTGCAGATTTCAGTAAAATTAAGCTGAAGGTTTGCCCCATTACTATTG
ATGATTTTTTCTCAAGAAAACTAAAGGCTTGGGCAGAATATTTTTGTCCT
TGTGATGATTATGACTATAAAACTTTTAGTGTAAACATATGCCCTATGTC
AGACGTCATAAAACCGTTCAACCATGCTGCATGTCAATGCTGCACTCCAG
ATTACCAGATTGATGATTATGTGACTTTATCAAACTACCCGATGTTGAGT
AAAATTATTGTATTTTTTGCCCAGCACAAAGAGGATTCCTCAAAAGTTAA
TATGTTCACAGTTTATAGTGGTATTGTAACTCTATAA Coding sequence (CDS) from alignment at sc0000041_pilon:85870..88356- >XLOC_039132 ID=XLOC_039132|Name=XLOC_039132|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4974bp|location=Sequence derived from alignment at sc0000041_pilon:85870..88356- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAATAATATCAAAAGTATACACCACAACAATGTTTTTCCTGACAT
GATCGGCAAACCGTACCTCCTAGCAGAAACATCTTTACGTACAACTGATT
GGGGAGAACACTTTCAATTCCTCGATAACACTGAACTTGGAAACACTGTT
TTCAATAACACGATATTGGATGAGATTCACCCTAGTGTATTTTCTTGCAA
GAATCTTTTGTCAAAAAGTCAGTGTAAAAAAATAATAACAAAGGCAGAGA
AATTAAATTTTCAACTATGTTGTTATGGCGAAGAAAGAAATAATTCTCGT
CTAGTTTTGTTTGATGAGAACTTTGCTGACTTTCTTTGGAAAAATTTGTC
AGAACAATTTGTAGATAAATTAGGAGATAATCCAGTTCATCCTTTTGGTT
TTGATGCTTCAAGAGGCAATTGGAAATTATCTGGAATTAATCAAGCCATG
CGTTTAAACAGATACAGTGGGAAAAATAAGGAATTTTTTGGTCCGCACAG
AGATGCTCCATTCTGTCCTAATGGTGATAAAAGATCTTTGTATACTATGC
TCATCTATTTGAATGATGATTTTGAAGGAGGTCAAACAATTTTACATTTT
CCAAAAAACATTTCAACTGATACCAAAGGTCAAACAATCAGTAAAGAAAT
TCAATTTCATGGTAATATTTTTCATGGATTTGACCACATCTCCATTAAAC
CACAAACAGGTACATGTTTGATCTTCAAACAAAATATTCTGCATCAAGGT
TACCCTTTACATTCAGAAAGTACCAATTATAAATATATTATTAAAACTGA
TATTATGGTTGAGCGCCCTGTCAAACTTGGATTTTCTCCACCTGTGGCAG
AGCTTCAAGACTATTTTGAATGTCTTCAATTATTTCGAGAAGCTCAGCAA
TGTGAATTAGCTGAAAATACAGCAAGAGCTAATGACTGCTATGAAAAGAG
CTTGTCTATTCGATATAATTACCCTAACCAAGAACAATTTGAGGAAAACT
TACCCAGGCAACATAGGGATTTTTCAGATGTTGCAGCCCCTGACAAGGAT
AATAATTCAATGGAGGCTATTGAAAATTTGTCTTTACCAAACATTTTTTC
GAAAGAGATTTGGCTTAAAATAATGAAATATATTGTTGACATCAAGTCTT
TGAACAATCTCTGTAAAGTGTTTCCCTTCTTGAAGTCTGAGAAGAAAAAG
CTATTCTTTGATAGAGTTGTTCCTGAGACTATTTACAGTAGTGGTGTTTA
TACAAATTTTTCAATATCTCAAAATGTAAACTTTGTTAACAACAATATGA
ACGAATTTGCCAAAGTTGCAGCAGTGTATTCAATGTGTTTACTCGGAAAT
GCACCCAATGATAAACACTATTTGGTGAATTATGATAGAGAAACAAGGAG
TGCAACAACTGTTCAGTTAAGAGATCTTCTTTATGGTGTATTTGCTGAGG
AACCTGTCCACGGTACCATCTTCAAAGTAGCACAAAGAAAAAAGGAAAAA
GATCCAAATAAAGATTTGTATCACAGTGTTGATAGAAATTACATGGCAAA
GTACTTTGATCGAGATGATATTGGGATAGATATGCAATCTGAATTTAGAT
CAAAGATTACAATTTTGTCTGAAACAGGAGATGGAGACGATAGAGATAAC
CTCTTTGTAGACTTACCACTAGCTGTCAGGGATCTAGAAGTGAGGAATAT
GCTGAATTCCTATGATCGCTATTATGAATATTGTAAAAATGAGCTTCCTC
GTGATGAACCACATGATGAACTTTATGAGAAAGGAGCTAGAGATTTCAAA
CTCGTAACTTATTCTGAAGATGATGGTTTTTATCCAGATGATCAGGTTGA
ATGCAATAAGGGAGATCTTGACTGCTATAAAGATCGTGATAAAGAAAGTG
TTGTTTGGAGAAGTAATATATATGATGATTCTGATGGTGAAGACTTCCCA
TTTCAAAAGATTGAGAAGCAAAAATTGGTCGATGAAAACATTACAATACA
GAAAGATTGTTTTCCAGGTGCAGCTATTATTAGAAAAATGAATGAACCTA
CAAAGATTTCAAAAGAAGATGGCTATTGTACTTGTTTTATGTTTCAACAT
TTGGGAGGTAAGCACAGTAAAAACTGCTCTAGCCACGTGTTTAACCATTT
AGTTGCAGATTTCAGTAAAATTAAGCTGAAGGTTTGCCCCATTACTATTG
ATGATTTTTTCTCAAGAAAACTAAAGGCTTGGGCAGAATATTTTTGTCCT
TGTGATGATTATGACTATAAAACTTTTAGTGTAAACATATGCCCTATGTC
AGACGTCATAAAACCGTTCAACCATGCTGCATGTCAATGCTGCACTCCAG
ATTACCAGATTGATGATTATGTGACTTTATCAAACTACCCGATGTTGAGT
AAAATTATTGTATTTTTTGCCCAGCACAAAGAGGATTCCTCAAAAGTTAA
TATGTTCACAGTTTATAGTGGTATTGTAACTCTATAAATGTATAATAATA
TCAAAAGTATACACCACAACAATGTTTTTCCTGACATGATCGGCAAACCG
TACCTCCTAGCAGAAACATCTTTACGTACAACTGATTGGGGAGAACACTT
TCAATTCCTCGATAACACTGAACTTGGAAACACTGTTTTCAATAACACGA
TATTGGATGAGATTCACCCTAGTGTATTTTCTTGCAAGAATCTTTTGTCA
AAAAGTCAGTGTAAAAAAATAATAACAAAGGCAGAGAAATTAAATTTTCA
ACTATGTTGTTATGGCGAAGAAAGAAATAATTCTCGTCTAGTTTTGTTTG
ATGAGAACTTTGCTGACTTTCTTTGGAAAAATTTGTCAGAACAATTTGTA
GATAAATTAGGAGATAATCCAGTTCATCCTTTTGGTTTTGATGCTTCAAG
AGGCAATTGGAAATTATCTGGAATTAATCAAGCCATGCGTTTAAACAGAT
ACAGTGGGAAAAATAAGGAATTTTTTGGTCCGCACAGAGATGCTCCATTC
TGTCCTAATGGTGATAAAAGATCTTTGTATACTATGCTCATCTATTTGAA
TGATGATTTTGAAGGAGGTCAAACAATTTTACATTTTCCAAAAAACATTT
CAACTGATACCAAAGGTCAAACAATCAGTAAAGAAATTCAATTTCATGGT
AATATTTTTCATGGATTTGACCACATCTCCATTAAACCACAAACAGGTAC
ATGTTTGATCTTCAAACAAAATATTCTGCATCAAGGTTACCCTTTACATT
CAGAAAGTACCAATTATAAATATATTATTAAAACTGATATTATGGTTGAG
CGCCCTGTCAAACTTGGATTTTCTCCACCTGTGGCAGAGCTTCAAGACTA
TTTTGAATGTCTTCAATTATTTCGAGAAGCTCAGCAATGTGAATTAGCTG
AAAATACAGCAAGAGCTAATGACTGCTATGAAAAGAGCTTGTCTATTCGA
TATAATTACCCTAACCAAGAACAATTTGAGGAAAACTTACCCAGGCAACA
TAGGGATTTTTCAGATGTTGCAGCCCCTGACAAGGATAATAATTCAATGG
AGGCTATTGAAAATTTGTCTTTACCAAACATTTTTTCGAAAGAGATTTGG
CTTAAAATAATGAAATATATTGTTGACATCAAGTCTTTGAACAATCTCTG
TAAAGTGTTTCCCTTCTTGAAGTCTGAGAAGAAAAAGCTATTCTTTGATA
GAGTTGTTCCTGAGACTATTTACAGTAGTGGTGTTTATACAAATTTTTCA
ATATCTCAAAATGTAAACTTTGTTAACAACAATATGAACGAATTTGCCAA
AGTTGCAGCAGTGTATTCAATGTGTTTACTCGGAAATGCACCCAATGATA
AACACTATTTGGTGAATTATGATAGAGAAACAAGGAGTGCAACAACTGTT
CAGTTAAGAGATCTTCTTTATGGTGTATTTGCTGAGGAACCTGTCCACGG
TACCATCTTCAAAGTAGCACAAAGAAAAAAGGAAAAAGATCCAAATAAAG
ATTTGTATCACAGTGTTGATAGAAATTACATGGCAAAGTACTTTGATCGA
GATGATATTGGGATAGATATGCAATCTGAATTTAGATCAAAGATTACAAT
TTTGTCTGAAACAGGAGATGGAGACGATAGAGATAACCTCTTTGTAGACT
TACCACTAGCTGTCAGGGATCTAGAAGTGAGGAATATGCTGAATTCCTAT
GATCGCTATTATGAATATTGTAAAAATGAGCTTCCTCGTGATGAACCACA
TGATGAACTTTATGAGAAAGGAGCTAGAGATTTCAAACTCGTAACTTATT
CTGAAGATGATGGTTTTTATCCAGATGATCAGGTTGAATGCAATAAGGGA
GATCTTGACTGCTATAAAGATCGTGATAAAGAAAGTGTTGTTTGGAGAAG
TAATATATATGATGATTCTGATGGTGAAGACTTCCCATTTCAAAAGATTG
AGAAGCAAAAATTGGTCGATGAAAACATTACAATACAGAAAGATTGTTTT
CCAGGTGCAGCTATTATTAGAAAAATGAATGAACCTACAAAGATTTCAAA
AGAAGATGGCTATTGTACTTGTTTTATGTTTCAACATTTGGGAGGTAAGC
ACAGTAAAAACTGCTCTAGCCACGTGTTTAACCATTTAGTTGCAGATTTC
AGTAAAATTAAGCTGAAGGTTTGCCCCATTACTATTGATGATTTTTTCTC
AAGAAAACTAAAGGCTTGGGCAGAATATTTTTGTCCTTGTGATGATTATG
ACTATAAAACTTTTAGTGTAAACATATGCCCTATGTCAGACGTCATAAAA
CCGTTCAACCATGCTGCATGTCAATGCTGCACTCCAGATTACCAGATTGA
TGATTATGTGACTTTATCAAACTACCCGATGTTGAGTAAAATTATTGTAT
TTTTTGCCCAGCACAAAGAGGATTCCTCAAAAGTTAATATGTTCACAGTT
TATAGTGGTATTGTAACTCTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:85870..88356 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2487:2488 |
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