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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000015_pilon:732991..737115+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039084 ID=XLOC_039084|Name=XLOC_039084|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4125bp|location=Sequence derived from alignment at sc0000015_pilon:732991..737115+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGAAACAACTTATGATTCAATGTTGCAATTTGAAATAGACGGAGA
ACATCCTCCTCCACTAGAAGAACTTTTAATGGATAAATATGATGAGTATA
GAAGATGTTTACTGTCGACGGAGTTGGACGATCAACAGCTCCAAAAAATG
GTCCAATTCATCTTGAAGACGCGCTCTTACCAAGCTTGTTTCTTCCAAGA
TGAGAACACTGATAGCCTCGATCTGATTAAAACGAAAGCTCCCATCAGTT
ATTTGATGTTCCCCATAGCAACAAAAGCTATCAAGACAGGGAGCCGTTCA
GAACAAGTCTACTTACAAGACTCTGATGTTGATTACATTTATGAGATTGG
CCCTCTGCTGGTGGAAGAAGTTAGCCTGctgaataaaataataaatttgc
GAAAGCATAGCCTATGGTACAAAGAAACAAAGCATGCTGGGTTTTACACC
GTCATAGATGACGAGGGTGGACATATAGCAGCAGTTGCAATGCAAGCTAA
AATTGATTCTTCAGCAAAGTCAATCAAGTTGGTAAGTAAGCCGTATTAaa
ccttaaccctttaagtgccatggtcatttttttctaagttttttaaagaa
aatcgctagttcaaactttaaaggcttatatctccggatctagaaggagt
tagttTATAGTCCGTTGGATAGCTGAGAGTCTCATCTTTCTTTTAGGCGC
GGCGGCTGAGGGGGAGGGGTAGGTAAGGGAAGCAGACTGTGGACCtacct
gaatgatagaaaggtggtaaaactttaaatcactggaggacagaatcaag
taaatcagggccaaatttggaggttcttggatcactcgttgaccaaaaat
ggtcaaaaaacggtcaaaatcttacaaaagtggatttttgtcaaatgttt
gcatttttttgactttttaccttaaaatctcgctgaaaagactcactttc
gatttttttttatgcTTCAACATAAAGcccaatctaattcctacgagtta
gaccaaaaataacgatttctaactcaaactgggcactACATTACCTAttt
ctgatatatacgacattggcacttaaagggttaatgatATCCTAAAATAC
AAGCCATCTAAATACAtttgagtttttgtttgattttttggaaGGTTAAC
CAACATATCTGAGTGTTAGTTAGTCTGAAATTTGGTACGTGGCAAATCAT
ACGCAATTTTCACCCTATTAAaatagtttttgagttttattttttcttcg
ttAGCTTTCAGAACGTAAGGAAGTTTCAGCAGTTTTAAccaccaatcaaa
acgctgaagATGATAAGGATGACGATTCACTTGGTGAAGATAGGGTCATT
GCATTACCTTTGAAACAATGGCCTCCACCTAATTGGAAGTCATTTAGCAA
AAGAAAGCCTATTTATTTGCAAAGGATCATGGATAAGTTAGAAGGTAAGT
AGTTCAATCCTCTCTGATTTCACTGTTCGGTTTTGGAAAAACTActagaa
aatgtttttagatctaatcatgaaggtaataaagatagatggagagtaAA
TACcgcttttgttctattctgatttatcatcggaagcaaacagctgtttg
gttgctttgggaataagacgATTAATTTCTGGTATACTCGTGGggatatt
taagatgaatgaaaagacattacatttttaacaagtatattgaaatataa
tagccttgtcatgaaaaattgaaaaaaacttcacataataagcacaatac
tctaaacttctaggggaagctgcccataaagccatcgatagatttaaaaa
agaattacgtgttacgattaggaaccttgaattgatcattttgtcagagt
atgaaaaccgctgcccacttagacgtgaagattttaagataagaaacttt
caatgataatgtgatgcgactctcaatgttcacaaaatgccaccctaaaa
atatatccttatgaaattaatatattcttttatccttaaatcagttgaaa
ctatttcgaatcgcattttaagtaagatttctcgcaaaattaagtttttc
aaaatcaacggaccagcctctttctgttcttataaacttaTAAATTGATG
tgttttgcttccaatgatggtacatcaaagaaaagccgctttgaatagat
ttataaaagatttcaacggccatttaggtcattaccgagacgttttctct
ccatctgaatctttattaccttcatgatctaatgggctcttccagaagaa
atttgaaaatatcctatatatcctccaccctccatgcacaaaaactttct
ggaagagcccaatagaAGAATAGTTTTGTTAAGATGTTAAGAATATGCGT
TGAAATTGTTGAATATACTTGGCTATCGCCAATACCTATCCATTGGAATA
CAATAGGATTCTTCAACATCTCATCATTGGATATTTTAATGattaatctt
ttttatattctttgttttcatcatAGAGGCTACCATCTATCTGGTTCCCA
AAGCACATCCTGACAGTGCTGACCCGTGGATAGAATGGagattatcattt
tcaatggtGGAAAAAGAAATCATGCTTAACTTGCCCCACTTGTACCGGAA
GGTCTATCTCATCTGCAAGGAGATGGCAAATGATTTGAAAGTCAAGAATG
TGTATTATTCATACGCTTTGAAAACTACTTTCATGTGGCAATGCGAGGCG
TGGTCCAAAACAGGCCTTGTATACACATTAGACCACATCTTAGATATGGT
ACAGAACGTCTTTCAGCGTCTTTACAAAGCTCATGAAACGAAAGACCTCC
AAAATTACTTTGTTCCCGATATGAACTTATTTGAACTGATCTCAGATTCG
AAGAAGGAGTCTGTAGCTTCGAAAAGGAAGGGTTATTGGCACCAAGCGGG
CGACGACGGAGATGATAGCACCTTACAGAATGATGTATTAGTGAAAGCAG
ACAAACATCTATTGAACTTACTGAAGACATACACAGAGAAGGAATCCCTC
ATTAagaaaatcatacaaaaaaacCAAGTACCTTTCTTTCCCATTGTTTA
CCAACAAGTTGTAACATCAACTAATAATGACCATAGTATTCAACGTGGTG
TGGTCATGTGGGACCATCAACCAGAATATCGTATCCCTAAGAAATATCAC
CCATCACATTACAACCTGTACAATCTTTCTGTTGACATCTCGCACGAAGA
CCCTGACATGTTAAACCATGAATGGAATGAGCGCATCCTGACAGAGTTAT
ACATCACTTTTCTTCTTCTGCTTTCCATAACAAGTTTGCAGCCTCGCACA
GGATGTAAAGAGCATTTGATGTATGTCTTATACAATATAAGCATCTTTTG
GAGAGAGAATCGTCTAAGCCAACAAAACACAGGAGCAGGATCAACTATTT
TTCAGGGAACTGAAGAAGATGCTTTCGtcaaaattcttgaatattACAAG
TCCTTGGCCTTCTATTTCTTTGGTGAAAAAGATTGGCTATTACAAACACC
TGATGCTTTAGGTTACACAGATcctctttctgattttttccatCATAAGC
AGGATCCTTACATGTGCTTCTTGAATCAGGAACTTCCTAAATCCTTCAAT
TCAGATATGACACCTGAAAAGCTTGAAAAATGTTGGCTCACTGGAAGCTT
GGACGAGGAGATGtttcagatgacgtcatcaaaagaaaaattgcaatatG
TTGAGAAATTCGATAAGAACCTCAAAAAGAAACGCCTTCTTAAAAGCAAA
ATCCTTTCCTTTGGAAATGCTGAAGGATGCAGAAACGTGCAtgaaaaagt
ttcgaaaaatccTTTCTACCAGCAGGATGCAGACTTTCAACCATTGGTGA
ATCAATTGAACATCAACTGGCAACGAAATCTTCGTCAACGGCTTTTGAAG
GAGAAAGAAATTCAGGAGAAAGATGATAGCAATGAAGAACCTCTCTTCAA
TGTAAGCCAAAAATATCCGCATAGTTTCCTCATGAAATGTCTTTTACCAC
AAATGTGTGAGATGTATAACTATGGATTCACCAGCAATAAATTCGATTTT
CCTACACCAGCTAAATATCTCTCTTTCGTTATGCAATTTCACACGAATGC
GATGGAGCATGATTTACAAACTCGT Coding sequence (CDS) from alignment at sc0000015_pilon:732991..737115+ >XLOC_039084 ID=XLOC_039084|Name=XLOC_039084|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4740bp|location=Sequence derived from alignment at sc0000015_pilon:732991..737115+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGAAACAACTTATGATTCAATGTTGCAATTTGAAATAGACGGAGA
ACATCCTCCTCCACTAGAAGAACTTTTAATGGATAAATATGATGAGTATA
GAAGATGTTTACTGTCGACGGAGTTGGACGATCAACAGCTCCAAAAAATG
GTCCAATTCATCTTGAAGACGCGCTCTTACCAAGCTTGTTTCTTCCAAGA
TGAGAACACTGATAGCCTCGATCTGATTAAAACGAAAGCTCCCATCAGTT
ATTTGATGTTCCCCATAGCAACAAAAGCTATCAAGACAGGGAGCCGTTCA
GAACAAGTCTACTTACAAGACTCTGATGTTGATTACATTTATGAGATTGG
CCCTCTGCTGGTGGAAGAAGTTAGCCTGctgaataaaataataaatttgc
GAAAGCATAGCCTATGGTACAAAGAAACAAAGCATGCTGGGTTTTACACC
GTCATAGATGACGAGGGTGGACATATAGCAGCAGTTGCAATGCAAGCTAA
AATTGATTCTTCAGCAAAGTCAATCAAGTTGATGACAGAAACAACTTATG
ATTCAATGTTGCAATTTGAAATAGACGGAGAACATCCTCCTCCACTAGAA
GAACTTTTAATGGATAAATATGATGAGTATAGAAGATGTTTACTGTCGAC
GGAGTTGGACGATCAACAGCTCCAAAAAATGGTCCAATTCATCTTGAAGA
CGCGCTCTTACCAAGCTTGTTTCTTCCAAGATGAGAACACTGATAGCCTC
GATCTGATTAAAACGAAAGCTCCCATCAGTTATTTGATGTTCCCCATAGC
AACAAAAGCTATCAAGACAGGGAGCCGTTCAGAACAAGTCTACTTACAAG
ACTCTGATGTTGATTACATTTATGAGATTGGCCCTCTGCTGGTGGAAGAA
GTTAGCCTGctgaataaaataataaatttgcGAAAGCATAGCCTATGGTA
CAAAGAAACAAAGCATGCTGGGTTTTACACCGTCATAGATGACGAGGGTG
GACATATAGCAGCAGTTGCAATGCAAGCTAAAATTGATTCTTCAGCAAAG
TCAATCAAGTTGCTTTCAGAACGTAAGGAAGTTTCAGCAGTTTTAAccac
caatcaaaacgctgaagATGATAAGGATGACGATTCACTTGGTGAAGATA
GGGTCATTGCATTACCTTTGAAACAATGGCCTCCACCTAATTGGAAGTCA
TTTAGCAAAAGAAAGCCTATTTATTTGCAAAGGATCATGGATAAGTTAGA
AGCTTTCAGAACGTAAGGAAGTTTCAGCAGTTTTAAccaccaatcaaaac
gctgaagATGATAAGGATGACGATTCACTTGGTGAAGATAGGGTCATTGC
ATTACCTTTGAAACAATGGCCTCCACCTAATTGGAAGTCATTTAGCAAAA
GAAAGCCTATTTATTTGCAAAGGATCATGGATAAGTTAGAAGAGGCTACC
ATCTATCTGGTTCCCAAAGCACATCCTGACAGTGCTGACCCGTGGATAGA
ATGGagattatcattttcaatggtGGAAAAAGAAATCATGCTTAACTTGC
CCCACTTGTACCGGAAGGTCTATCTCATCTGCAAGGAGATGGCAAATGAT
TTGAAAGTCAAGAATGTGTATTATTCATACGCTTTGAAAACTACTTTCAT
GTGGCAATGCGAGGCGTGGTCCAAAACAGGCCTTGTATACACATTAGACC
ACATCTTAGATATGGTACAGAACGTCTTTCAGCGTCTTTACAAAGCTCAT
GAAACGAAAGACCTCCAAAATTACTTTGTTCCCGATATGAACTTATTTGA
ACTGATCTCAGATTCGAAGAAGGAGTCTGTAGCTTCGAAAAGGAAGGGTT
ATTGGCACCAAGCGGGCGACGACGGAGATGATAGCACCTTACAGAATGAT
GTATTAGTGAAAGCAGACAAACATCTATTGAACTTACTGAAGACATACAC
AGAGAAGGAATCCCTCATTAagaaaatcatacaaaaaaacCAAGTACCTT
TCTTTCCCATTGTTTACCAACAAGTTGTAACATCAACTAATAATGACCAT
AGTATTCAACGTGGTGTGGTCATGTGGGACCATCAACCAGAATATCGTAT
CCCTAAGAAATATCACCCATCACATTACAACCTGTACAATCTTTCTGTTG
ACATCTCGCACGAAGACCCTGACATGTTAAACCATGAATGGAATGAGCGC
ATCCTGACAGAGTTATACATCACTTTTCTTCTTCTGCTTTCCATAACAAG
TTTGCAGCCTCGCACAGGATGTAAAGAGCATTTGATGTATGTCTTATACA
ATATAAGCATCTTTTGGAGAGAGAATCGTCTAAGCCAACAAAACACAGGA
GCAGGATCAACTATTTTTCAGGGAACTGAAGAAGATGCTTTCGtcaaaat
tcttgaatattACAAGTCCTTGGCCTTCTATTTCTTTGGTGAAAAAGATT
GGCTATTACAAACACCTGATGCTTTAGGTTACACAGATcctctttctgat
tttttccatCATAAGCAGGATCCTTACATGTGCTTCTTGAATCAGGAACT
TCCTAAATCCTTCAATTCAGATATGACACCTGAAAAGCTTGAAAAATGTT
GGCTCACTGGAAGCTTGGACGAGGAGATGtttcagatgacgtcatcaaaa
gaaaaattgcaatatGTTGAGAAATTCGATAAGAACCTCAAAAAGAAACG
CCTTCTTAAAAGCAAAATCCTTTCCTTTGGAAATGCTGAAGGATGCAGAA
ACGTGCAtgaaaaagtttcgaaaaatccTTTCTACCAGCAGGATGCAGAC
TTTCAACCATTGGTGAATCAATTGAACATCAACTGGCAACGAAATCTTCG
TCAACGGCTTTTGAAGGAGAAAGAAATTCAGGAGAAAGATGATAGCAATG
AAGAACCTCTCTTCAATGTAAGCCAAAAATATCCGCATAGTTTCCTCATG
AAATGTCTTTTACCACAAATGTGTGAGATGTATAACTATGGATTCACCAG
CAATAAATTCGATTTTCCTACACCAGCTAAATATCTCTCTTTCGTTATGC
AATTTCACACGAATGCGATGGAGCATGATTTACAAACTCGTAGGCTACCA
TCTATCTGGTTCCCAAAGCACATCCTGACAGTGCTGACCCGTGGATAGAA
TGGagattatcattttcaatggtGGAAAAAGAAATCATGCTTAACTTGCC
CCACTTGTACCGGAAGGTCTATCTCATCTGCAAGGAGATGGCAAATGATT
TGAAAGTCAAGAATGTGTATTATTCATACGCTTTGAAAACTACTTTCATG
TGGCAATGCGAGGCGTGGTCCAAAACAGGCCTTGTATACACATTAGACCA
CATCTTAGATATGGTACAGAACGTCTTTCAGCGTCTTTACAAAGCTCATG
AAACGAAAGACCTCCAAAATTACTTTGTTCCCGATATGAACTTATTTGAA
CTGATCTCAGATTCGAAGAAGGAGTCTGTAGCTTCGAAAAGGAAGGGTTA
TTGGCACCAAGCGGGCGACGACGGAGATGATAGCACCTTACAGAATGATG
TATTAGTGAAAGCAGACAAACATCTATTGAACTTACTGAAGACATACACA
GAGAAGGAATCCCTCATTAagaaaatcatacaaaaaaacCAAGTACCTTT
CTTTCCCATTGTTTACCAACAAGTTGTAACATCAACTAATAATGACCATA
GTATTCAACGTGGTGTGGTCATGTGGGACCATCAACCAGAATATCGTATC
CCTAAGAAATATCACCCATCACATTACAACCTGTACAATCTTTCTGTTGA
CATCTCGCACGAAGACCCTGACATGTTAAACCATGAATGGAATGAGCGCA
TCCTGACAGAGTTATACATCACTTTTCTTCTTCTGCTTTCCATAACAAGT
TTGCAGCCTCGCACAGGATGTAAAGAGCATTTGATGTATGTCTTATACAA
TATAAGCATCTTTTGGAGAGAGAATCGTCTAAGCCAACAAAACACAGGAG
CAGGATCAACTATTTTTCAGGGAACTGAAGAAGATGCTTTCGtcaaaatt
cttgaatattACAAGTCCTTGGCCTTCTATTTCTTTGGTGAAAAAGATTG
GCTATTACAAACACCTGATGCTTTAGGTTACACAGATcctctttctgatt
ttttccatCATAAGCAGGATCCTTACATGTGCTTCTTGAATCAGGAACTT
CCTAAATCCTTCAATTCAGATATGACACCTGAAAAGCTTGAAAAATGTTG
GCTCACTGGAAGCTTGGACGAGGAGATGtttcagatgacgtcatcaaaag
aaaaattgcaatatGTTGAGAAATTCGATAAGAACCTCAAAAAGAAACGC
CTTCTTAAAAGCAAAATCCTTTCCTTTGGAAATGCTGAAGGATGCAGAAA
CGTGCAtgaaaaagtttcgaaaaatccTTTCTACCAGCAGGATGCAGACT
TTCAACCATTGGTGAATCAATTGAACATCAACTGGCAACGAAATCTTCGT
CAACGGCTTTTGAAGGAGAAAGAAATTCAGGAGAAAGATGATAGCAATGA
AGAACCTCTCTTCAATGTAAGCCAAAAATATCCGCATAGTTTCCTCATGA
AATGTCTTTTACCACAAATGTGTGAGATGTATAACTATGGATTCACCAGC
AATAAATTCGATTTTCCTACACCAGCTAAATATCTCTCTTTCGTTATGCA
ATTTCACACGAATGCGATGGAGCATGATTTACAAACTCGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000015_pilon | genome | sc0000015_pilon:732991..737115 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 724-2370:2479 |
| Aaloc | 532-720:1255 |
| Aaloc | 1-531:1 |
|
