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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000315_pilon:41790..44697+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039021 ID=XLOC_039021|Name=XLOC_039021|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2908bp|location=Sequence derived from alignment at sc0000315_pilon:41790..44697+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCGagtgaaaagattttttgttcacACTTTCAAAACGGGaaaaaaaGAT
GGACAAACTTCAACAAGACTTATACTGTCATCCTCCTCGTTGCTGTTTTC
GCATGTTGCTATGGTGACAATAAATGTGTCATTTTGAATGATGTTAATGG
CTGTAGTACACCAATCAAATCTGATCAAATACCATACAGAGTTCGATTTA
CGCCTGCTTGTAACTCACACGATGCTTGCTACAGATGCGTAAGTAGAAAC
ATTTCGAAATCACAATTGACTCCCCCTTATTCGACTCAAAGGACCGATTA
TTATGAATGCGATAATGAGATggttcaaaaatgtttttgtaaaatattta
aaaaacccTGCATAAGTTTTACTTGCCATTTTTGATCGTTGTTTTACCTA
AAACATACTACCCTAATGTTAACTTAACTCGAGATTTGGGTCAAGGACTC
TGACCATAAGCAGAAAATTGAAGATAAAACATTTGCTTTAGGTTCTTTGA
CATTTTAACAAAAACTGACTTTCACAAGTTGttttgcaaagaattgattt
attttaaattttttggaaaatttttctaaatcgaTGTATCAAAGATTATG
ACTGTTAATGAGAATTAAAAATAGAGGATGAAGAATTGGGCAAAAGccaa
tattttcaagattttgagacaaagaagctttttcaaaaattctccgAAAA
TCCATTTTTTGGTTCGggtaaagatacaccatctaccgcaaaataatttt
caaaatgtttattcTGATCGCCAAAAATAAGGTCTTAAAGCcgaaatact
cttcttcaatttatattttgtacatgtctAACATGCCGCAATTAGGAAAA
AtttactatggtcagagcccttaatgtaTAATAAAATGCCGTTTTCCGTC
GAAAAAGTGTTGACCTACTTCGAGTATAGAACTGCAATAAATTCTTATCA
CCGATTTTGATTTGCTGGAATTTAGAAACTGTATCCAAACTGTTAAGACT
AAATCACGGAGGGACGCTATAGCGGAGTAACCattgatagaaaaaagaaa
ctttttctatATCTTTAGGGACAAATGTACAACTGGACTCAAAGTGATTG
TGATAATGGTTTCTTGAACAAAATGAAAGCTGTTTGTGTCAACCAACCCG
ATCAAACAGCATTCAGTGTATACGCTAGCACCAAAGGTAAAGATTTTCAA
CCTTCTTGTATACCTGCTATACGTTTAATTATTAAATcagtcgacgctct
ctaattcgacatcctactattcgataataccattattcgataatattgaa
agtcaccgtttACAAGAAATGCCATAAACGACGCTCTCTATTCAATGATC
GAATCAAATCGAATAATAGAGCATCCACTGTACTTGCAACACGTAAAATC
GAAACTTTGAGGCCGAGGCACGACCCTGTGTTttaccgtgaatagcacag
gtcaaaatcatatattgacgctgtgccgacgaatcgagattctattcagc
gcgcaatcaacgaagacaaaagtgaccatgacgaccatccaagatcttgg
atgaggttcaaagttgatatttttattcccgtcgttgaaaacacaactta
caaaaagtcatcaatgctttgtaaaaagagtcagtgatagagaatcataa
cataaagtctgtctattattttaattcaattaaagtgccatttccataat
taaaagtttagtaattattgttatacatttggggatcatgtaaaagattt
ctttcgaaataaactcatttcaattacacttggaggtttctggggaattc
gtaaatacagggtgtccctaattaaagtatcgagtttgaacatgcgattg
agtagaaaagtttgtgtgtgttatcgctaaaatataagaacgttctccat
cacacaggcttattacaaaaggtagttacaacgtataaattaatcgtaat
gacaaagaaaaaagagggagagcttaaaatacaattttgtgaacacgcac
ataaaactttctactcatagttgtgtttcgactcgatactttaattaggg
acaccctgtagtaaactgcatactgatacagtctgctagacattaatatg
gtaatatttgctcttcatctttgattttttctacagtgattagattgaca
catgcgcaataaaatttctattatttgtcttcagaggttaatatatattt
tgaaaacttaacctctgatacttaGGGTACCTGTGTTTGGCTAAGTTTTA
CATTTTTGTATGAATTAATGGATACACTCTGTCTCGGTGACCCTGAGAGC
TTTTCTATTGACTGGGAACAGATTGAAGGAGCTAATAGGCAAATGAGGAT
TGAGAAATATGTTTAAATGTTATTGATTTATGGCTAGCTCTCAAATTCTC
AGTGCTTTTTACCAAACGCAAAACAACGttcatgtgacattcataacgtc
taaataacgttatttgaatgttaaaacaacgttgtgtgccagctgggtca
cCAATAATGAATGAGGTCTGTGTTTAGTTTTTTCAATGGTGATTAcagga
tatttttttctcaacacACCGAGGTAagtttttggctaatttttgcACTG
GGTAGGGGCTCCAACGCAAACCCAATCTGCAATACATGATATAAAAAGAT
ATAATCTGAAAACACTTCGACATTATTGCaattatgttttcttttttctt
tttcaggaaaaatgATGTCCTATCTCGAATTCTTCAAACGCATTTACGAC
GGATACAAAAAAGCCACTCAAAACGGAACCAAAGCTGAAGCGCAAAGAGT
CTGGGACGAGTGTCAAAAACTCTTATCAGTATTTAGACAATGGATCAAAG
CTTCTCAGGAGTTCCGAAATGTCTATTGGGGGCCCAAGGATATTATCATG
CAGTCCGT Coding sequence (CDS) from alignment at sc0000315_pilon:41790..44697+ >XLOC_039021 ID=XLOC_039021|Name=XLOC_039021|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1116bp|location=Sequence derived from alignment at sc0000315_pilon:41790..44697+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCGagtgaaaagattttttgttcacACTTTCAAAACGGGaaaaaaaGAT
GGACAAACTTCAACAAGACTTATACTGTCATCCTCCTCGTTGCTGTTTTC
GCATGTTGCTATGGTGACAATAAATGTGTCATTTTGAATGATGTTAATGG
CTGTAGTACACCAATCAAATCTGATCAAATACCATACAGAGTTCGATTTA
CGCCTGCTTGTAACTCACACGATGCTTGCTACAGATGCTTCGagtgaaaa
gattttttgttcacACTTTCAAAACGGGaaaaaaaGATGGACAAACTTCA
ACAAGACTTATACTGTCATCCTCCTCGTTGCTGTTTTCGCATGTTGCTAT
GGTGACAATAAATGTGTCATTTTGAATGATGTTAATGGCTGTAGTACACC
AATCAAATCTGATCAAATACCATACAGAGTTCGATTTACGCCTGCTTGTA
ACTCACACGATGCTTGCTACAGATGCGGACAAATGTACAACTGGACTCAA
AGTGATTGTGATAATGGTTTCTTGAACAAAATGAAAGCTGTTTGTGTCAA
CCAACCCGATCAAACAGCATTCAGTGTATACGCTAGCACCAAAGGGACAA
ATGTACAACTGGACTCAAAGTGATTGTGATAATGGTTTCTTGAACAAAAT
GAAAGCTGTTTGTGTCAACCAACCCGATCAAACAGCATTCAGTGTATACG
CTAGCACCAAAGgaaaaatgATGTCCTATCTCGAATTCTTCAAACGCATT
TACGACGGATACAAAAAAGCCACTCAAAACGGAACCAAAGCTGAAGCGCA
AAGAGTCTGGGACGAGTGTCAAAAACTCTTATCAGTATTTAGACAATGGA
TCAAAGCTTCTCAGGAGTTCCGAAATGTCTATTGGGGGCCCAAGGATATT
ATCATGCAGTCCGTgaaaaatgATGTCCTATCTCGAATTCTTCAAACGCA
TTTACGACGGATACAAAAAAGCCACTCAAAACGGAACCAAAGCTGAAGCG
CAAAGAGTCTGGGACGAGTGTCAAAAACTCTTATCAGTATTTAGACAATG
GATCAAAGCTTCTCAGGAGTTCCGAAATGTCTATTGGGGGCCCAAGGATA
TTATCATGCAGTCCGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000315_pilon | genome | sc0000315_pilon:41790..44697 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 508-558:2858 |
| Aaloc | 502-504:2855 |
| Aaloc | 358-501:2709 |
| Aaloc | 238-354:1069 |
| Aaloc | 52-237:53 |
| Aaloc | 1-51:1 |
|
