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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000315_pilon:60311..62487+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039020 ID=XLOC_039020|Name=XLOC_039020|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2177bp|location=Sequence derived from alignment at sc0000315_pilon:60311..62487+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACGTGGATGGGCCGGCAATTTACGATGCGGTATGAAacaataaatc
ttttttctaaaaacaatgatattttggaaaatttatcggtcctttttacg
ccggccttaATTACACCAAAgctcttttttccattttcagccCGGTTCTA
ATTTAATTACGATCCCTTACATTGTCCCTTATTActctagcaaaaaaaaa
ttagtgtCTATTATAGGGCTGATGTAAAAAAGGACCGATAAGGTACTGCA
GTGACACGATCTGTATGATTAGTGAAAGACTACTGTATTTTCTGTTATAT
TATATTGTTAATGTCTTCTTCTTTAGTTATATCCAACATAACATCATCTT
TTGGGGGAAAGATATGTAGACTAATCTTGTATTATCTATCTAACTTTTGC
CAGTTCTTTGCGTTTGCCCCTCTCTTCGTTTGAATTAGAATGTGTTTTCG
TTTACtagagtttttttttatctaattgtATGATTAGCTTTTCAACCTGG
ATAGTTTCAAGGGGATGTGAagtactttttttcaattcagtaaataattt
ttctatacctcaaatacacgttttttttttattagaacacctaaaatttg
gctgagcctggatgtgcttatttttttagcaattttcagcctaaaatgtt
cttaaatgcgttcttaatttttcagactactctaaatcgacaatatcatg
caaaatatggagcacttaaaattggtaaaatttggacaatatttgactct
cgatttttgaaaatccatCACTAATttcagttaaaactgcttgaaaagag
gaaacaaTTGTAGtctcttgtcatttttttccaaactgaggctgggcatg
ttcttaagatattcttaatttttcgacgaatttcagcctcaatgttctta
taaactgggttctaataagaaaaaaaaacttgtatgcAATTAATCTTTAG
TTGGTGTTCTGTGTCCACCCATTTCTTGTATGTAACcttttaatggctta
cttaatgaccatATATGGATAATAATCTTGTATTATCTATCTAACCTTTG
CCAGTTCTTTGCGTTTGCCCCTCTCTTCGTTTGAATTAGAATATGTTTTT
CGTTTGCTAGAGTTTGTTTTTTGATATAATTGTATGACTAGCTTTTCAGT
TTCCACCCATTTCTTGTGTGTAAAGCTGTGATTTAAAGTGGATTGTTTGG
ATATGATTTGTTTGTCCGCTCAAATGGATTCTAATCTTCCTTTATTTGCA
GGTATAACATTGCATAACCCGGCTGATATTGTAATACCGCAATACTTGTT
ACCAGACTTGTATCAACTTGGTAGATCGTGTGTCTTCTCCATAAAACCAT
GTATGTTAGATCCATTTAGTGATATGGAGCTATCAGAGAAAAACGAGGAA
GATGATTTCCATTGCAAGTATTTTGATTCTATAACCAATTGTAAAACAAC
ACATAATGTCCATCCAGAACTGTTGGTGAATGAAGATTATATTGGTGTTA
AACCATGTGATAGAGGTAGCCGCATTGGATTTTTCATATCACCAGGCaga
gaattatttttcattatcaATGGGATACAATATGGACCTTGTGCAGGACA
AATTCCAATAAATGGTCCAGTTTATGCGGCTCTTGATTTGTATGGGATGa
caagtcaaataaaagtcatAAATTGCCATGGTAAGCTTTTCTAACTTTTC
CTCGCACGTTTCAGAGTTAGTAAGGTAGCATAAAGAGCTTTAAATAAGGT
TATGAACAAAAGACCGAccatttaaagtttaaaaagaccTGTTTATCACA
CCTTTTTATACAAATAATGTTGGAATGATTTCCTGAACAGTGTAGAATCA
GGAATTCCTCGTTAAACAAAAAGATCTTGCTATTAATTTACCGCCCTATC
CAGGAGTCAAATAGATACATATCTGAACTTccctcaaaaattgttttttt
ctatcttttctCCTACAGTAGCACGACTGAAGACTTTGAGTATGGACTCA
TTGTCTTCAAATCATTCACGTAAAACAATATCCGAACAAAATCTACCGaa
acttttaaagaaagaaCTTTTGCTGATGTATGGATTAGTCGAGGATGAGG
AAGATAAATTATCGTTGTCTTATTCCTCATCTAAACGACCAAGGCTGATG
TCAAAATTATGCTGGGACCAAGGATAA Coding sequence (CDS) from alignment at sc0000315_pilon:60311..62487+ >XLOC_039020 ID=XLOC_039020|Name=XLOC_039020|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000315_pilon:60311..62487+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACGTGGATGGGCCGGCAATTTACGATGCGATGAACGTGGATGGGCC
GGCAATTTACGATGCGactactctaaatcgacaatatcatgcaaaatatg
gagcacttaaaattgactactctaaatcgacaatatcatgcaaaatatgg
agcacttaaaattgGTATAACATTGCATAACCCGGCTGATATTGTAATAC
CGCAATACTTGTTACCAGACTTGTATCAACTTGGTAGATCGTGTGTCTTC
TCCATAAAACCATGTATGTTAGATCCATTTAGTGATATGGAGCTATCAGA
GAAAAACGAGGAAGATGATTTCCATTGCAAGTATTTTGATTCTATAACCA
ATTGTAAAACAACACATAATGTCCATCCAGAACTGTTGGTGAATGAAGAT
TATATTGGTGTTAAACCATGTGATAGAGGTAGCCGCATTGGATTTTTCAT
ATCACCAGGCagagaattatttttcattatcaATGGGATACAATATGGAC
CTTGTGCAGGACAAATTCCAATAAATGGTCCAGTTTATGCGGCTCTTGAT
TTGTATGGGATGacaagtcaaataaaagtcatAAATTGCCATGGTATAAC
ATTGCATAACCCGGCTGATATTGTAATACCGCAATACTTGTTACCAGACT
TGTATCAACTTGGTAGATCGTGTGTCTTCTCCATAAAACCATGTATGTTA
GATCCATTTAGTGATATGGAGCTATCAGAGAAAAACGAGGAAGATGATTT
CCATTGCAAGTATTTTGATTCTATAACCAATTGTAAAACAACACATAATG
TCCATCCAGAACTGTTGGTGAATGAAGATTATATTGGTGTTAAACCATGT
GATAGAGGTAGCCGCATTGGATTTTTCATATCACCAGGCagagaattatt
tttcattatcaATGGGATACAATATGGACCTTGTGCAGGACAAATTCCAA
TAAATGGTCCAGTTTATGCGGCTCTTGATTTGTATGGGATGacaagtcaa
ataaaagtcatAAATTGCCATGTAGCACGACTGAAGACTTTGAGTATGGA
CTCATTGTCTTCAAATCATTCACGTAAAACAATATCCGAACAAAATCTAC
CGaaacttttaaagaaagaaCTTTTGCTGATGTATGGATTAGTCGAGGAT
GAGGAAGATAAATTATCGTTGTCTTATTCCTCATCTAAACGACCAAGGCT
GATGTCAAAATTATGCTGGGACCAAGGATAATAGCACGACTGAAGACTTT
GAGTATGGACTCATTGTCTTCAAATCATTCACGTAAAACAATATCCGAAC
AAAATCTACCGaaacttttaaagaaagaaCTTTTGCTGATGTATGGATTA
GTCGAGGATGAGGAAGATAAATTATCGTTGTCTTATTCCTCATCTAAACG
ACCAAGGCTGATGTCAAAATTATGCTGGGACCAAGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000315_pilon | genome | sc0000315_pilon:60311..62487 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 514-720:1971 |
| Aaloc | 85-510:1254 |
| Aaloc | 34-81:676 |
| Aaloc | 1-33:1 |
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