XLOC_038937 (mRNA) -

Overview
NameXLOC_038937
Unique NameXLOC_038937
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000005_pilon:1222044..1223003+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038937 ID=XLOC_038937|Name=XLOC_038937|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=960bp|location=Sequence derived from alignment at sc0000005_pilon:1222044..1223003+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGACTCTGGTTGATAAAAGTATCCAAGCCAATGTGAAGAACAAGTGTAT CTTCCCTGGTTGCAACAAAGCTTTCTACCATAAATCACGAATGATGCAAC ATTTGCAAGAAGAACACAAGATTGCTGTTGAGAGTGAAACCAAAAGATTT GATAGTTTGGAAGAattttttgaatggaaagaatTAGAGGAAACAACAAA CTTTGTTTATTTCCCGAGAAAAGAATCTAGGGCTATGTCAAATGGCATAC GACATGAAACATATGTCTGTCAATATAAAGGAAAAAGACAACCTGCTGCA TTTAAAAACTCCACAGGGAAAAGAAAAGAAGCCAAGAAGCATCCAGTTTG TCCTGCACGTATGCTCGTCACAATCAAGACATCCAAAAAGAGGGTTGACG TATCGTTGAAGTACATTAAGTCACACAATCACCCTATCTGTTGTGAAGAC ATCAAAAATAAACCCATCTCAAACCAAATGAaggatgaaatcaaagaaaa gttgTTGGAAAATAAATCAATAGATGATGTTATCTCAGAACTGCAGCGGG AAGTAGTTGATGAACCGAGCGGAAGTTCTTTGCAGAAAGTTTTCATGGAA AGACATCGGGTCAGATACATTCAACAGAAATTAAACCTCCCCAAAAGCAA CAATGAAAAGACTACATCAATAACCATAGAAAACCGATTGAAATCACTCA CAACACCTGACTTCAACCCTATACTGCTTTATAAACCAGCTCAAGCTCTG ATTGAAACAGATGGACCGAATTTGGACACCGAAACGTTTACCTTTGGGAT TCAAACGAAGGAACAAAGCCAATTGTTTCAGAAATATGCAACAGGGATTG TGCTTTTTGAACTGGCAATGCCGTCCACATTCATACCTTATTACATCTTG ACATTGAAAGTTGTTGATGAACTAAAACAGGCTTACAATGTTGCCCATTT GATATCAAGC

Coding sequence (CDS) from alignment at sc0000005_pilon:1222044..1223003+

>XLOC_038937 ID=XLOC_038937|Name=XLOC_038937|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000005_pilon:1222044..1223003+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGACTCTGGTTGATAAAAGTATCCAAGCCAATGTGAAGAACAAGTGTAT
CTTCCCTGGTTGCAACAAAGCTTTCTACCATAAATCACGAATGATGCAAC
ATTTGCAAGAAGAACACAAGATTGCTGTTGAGAGTGAAACCAAAAGATTT
GATAGTTTGGAAGAattttttgaatggaaagaatTAGAGGAAACAACAAA
CTTTGTTTATTTCCCGAGAAAAGAATCTAGGGCTATGTCAAATGGCATAC
GACATGAAACATATGTCTGTCAATATAAAGGAAAAAGACAACCTGCTGCA
TTTAAAAACTCCACAGGGAAAAGAAAAGAAGCCAAGAAGCATCCAGTTTG
TCCTGCACGTATGCTCGTCACAATCAAGACATCCAAAAAGAGGGTTGACG
TATCGTTGAAGTACATTAAGTCACACAATCACCCTATCTGTTGTGAAGAC
ATCAAAAATAAACCCATCTCAAACCAAATGAaggatgaaatcaaagaaaa
gttgTTGGAAAATAAATCAATAGATGATGTTATCTCAGAACTGCAGCGGG
AAGTAGTTGATGAACCGAGCGGAAGTTCTTTGCAGAAAGTTTTCATGGAA
AGACATCGGGTCAGATACATTCAACAGAAATTAAACCTCCCCAAAAGCAA
CAATGAAAAGACTACATCAATAACCATAGAAAACCGATTGAAATCACTCA
CAACACCTGACTTCAACCCTATACTGCTTTATAAACCAGCTCAAGCTCTG
ATTGAAACAGATGGACCGAATTTGGACACCGAAACGTTTACCTTTGGGAT
TCAAACGAAGGAACAAAGCCAATTGTTTCAGAAATATGCAACAGGGATTG
TGCTTTTTGAACTGGCAATGCCGTCCACATTCATACCTTATTACATCTTG
ACATTGAAAGTTGTTGATGAACTAAAACAGGCTTACAATGTTGCCCATTT
GATATCAAGCCTGACTCTGGTTGATAAAAGTATCCAAGCCAATGTGAAGA
ACAAGTGTATCTTCCCTGGTTGCAACAAAGCTTTCTACCATAAATCACGA
ATGATGCAACATTTGCAAGAAGAACACAAGATTGCTGTTGAGAGTGAAAC
CAAAAGATTTGATAGTTTGGAAGAattttttgaatggaaagaatTAGAGG
AAACAACAAACTTTGTTTATTTCCCGAGAAAAGAATCTAGGGCTATGTCA
AATGGCATACGACATGAAACATATGTCTGTCAATATAAAGGAAAAAGACA
ACCTGCTGCATTTAAAAACTCCACAGGGAAAAGAAAAGAAGCCAAGAAGC
ATCCAGTTTGTCCTGCACGTATGCTCGTCACAATCAAGACATCCAAAAAG
AGGGTTGACGTATCGTTGAAGTACATTAAGTCACACAATCACCCTATCTG
TTGTGAAGACATCAAAAATAAACCCATCTCAAACCAAATGAaggatgaaa
tcaaagaaaagttgTTGGAAAATAAATCAATAGATGATGTTATCTCAGAA
CTGCAGCGGGAAGTAGTTGATGAACCGAGCGGAAGTTCTTTGCAGAAAGT
TTTCATGGAAAGACATCGGGTCAGATACATTCAACAGAAATTAAACCTCC
CCAAAAGCAACAATGAAAAGACTACATCAATAACCATAGAAAACCGATTG
AAATCACTCACAACACCTGACTTCAACCCTATACTGCTTTATAAACCAGC
TCAAGCTCTGATTGAAACAGATGGACCGAATTTGGACACCGAAACGTTTA
CCTTTGGGATTCAAACGAAGGAACAAAGCCAATTGTTTCAGAAATATGCA
ACAGGGATTGTGCTTTTTGAACTGGCAATGCCGTCCACATTCATACCTTA
TTACATCTTGACATTGAAAGTTGTTGATGAACTAAAACAGGCTTACAATG
TTGCCCATTTGATATCAAGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038937XLOC_038937-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005_pilongenomesc0000005_pilon:1222044..1223003 +
Properties
Property NameValue
Aaloc1-960:1