|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000329_pilon:51234..53323+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038896 ID=XLOC_038896|Name=XLOC_038896|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2090bp|location=Sequence derived from alignment at sc0000329_pilon:51234..53323+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacTGACAAAGGTAGATTATGGATCACATTACTATTAAACTATTTGGC
GCTCTCGCAATCCTTTAATGTGGACAGCGAAGCCAATCGGTTGGAGTTCT
CCATTAGCGGTGGTTCCGGTGAAGACAAATCAAGTTTCTTTGGTTATTCC
ATTGGTCTCTTCAAAACTTTAGCTGATGCAAGGTAATTTAAAGTTTGCAA
TTCTTCCAAAGTAGTTCTTCTCTTCGCTTTCATttacttttagttttatt
tcATATCTCAAAGAATATTTGGAGcatagaaaagaaaattcaaaaatcgt
CCTCGAGAAACTTTTCCGTCATTTCATCATTGAAACAACATTAAAGTTTT
TAATCAATCATCTACCTTGAAGCTAATTAAAATAGGATGAACTGAGAGGA
AATTAGGAACACTTTAGGGTTTAACAAATTGACGAATAAGCAAAAAAGGG
CAGAACTGACAAATAATCTCTGTAATCGAATACTAGCTCATGCTAGTAAT
CTTCACTTTATGGAAAAAACATTAACCATGGAAATGAGgcaattaaaatt
tcaaaaagctttaaagtAATCGaaggttttttgaattttgaaaagctttt
gCACAAAGGATCGTGCTAAGCTATAAGACcttctctttttcaaaacattg
accaTTTGACCCTTTAGACCACAAAATAGTTTTATTAATCGAGTACAACT
CGTATCTATTATTGGCTCTGACCACAAAAGTTTTAATGTAGCATCAGAAG
TAATTTATAATATGGCAATATTGGTTTCACTTCAAGCCCTCATACCACAA
GTTTTTAAAATGATGTACACGCGAACATGACCAATTAACCTATTATAAAG
CTCGTGAGATAAAAGTAATTGCAACCAATTTTTCATTCATGCTTCAAGCA
CTGTTACATATCTTATGTAATGctgattcttttgaaaaaatttgtcaaTT
GCAGAATTTTATCGCGTCTAACACACCTGGGGGTGACTGATAACTGAtaa
gaaattgttttttattccaACTTGTCATTAATATGATAATGTATGTCCTA
CTGTTTATGAAATAACAACATAGAATTGTTCAAGTTAGCTTTATAGCTTA
CACTGTCGAGGAGCACTTAAGGTCTTCAAATAATCTAAAAGATGACACAT
TAAAACGgtgtaattttagaaaaaagaaaaaagaatcgCTTATCCAGGAG
TAAGGAAATAGTTCATGATATTAGCATTCGTAAAATTTTCCCATTGGACT
ACTAATTAagaatttcataattttgtaaCATTATACATAATATTGAATCA
ATTTTTACCGTTGAAGTAAAGCTCCTTatttgaagatttcttcaaatcaa
aataaatatctaggatgtagaaaaatataatttccgtGATCATTAAAGTT
TTACTACCGGTAGTTGTGTAATTACAGTCTCCTTCATGAGTTATCTTTGA
CAAATAGCTACTTAAAAATGCAATTTATCATGTCGAAGTAATAATTTCAA
ATGACAATCTTGCCTACTCCTTGTCAATCCAAATAATTCTGaaaaaaaGG
AACCATTATTTTTCGATAAGAAAACTTGTTAACCTGCCCATTAATGCCGT
AGCTTATAGtttttttGGCCCAACGCATCAACTGAGATTTCGCTTCCCGC
CGACTTCCCAACGGAACCTTAacggaactaattttgacgagacAGCAATT
TTTCTAAACTAACTTCGGGAAATTTCGGTAAACGCTCAACAAGACCAGCG
GCAAGGCTTCAGTACATCTGTTGCTCAGCTTTATTCTTATATTCGCAATA
TTCATCAGCACAAAAAGTTGATTTGCAGCCAGTCGATTTAAACCGTCTCT
CATCTTATCTATCTATTCAGACTATTTTAGAATAATTCATACTCGAGTTT
CATGGCCCGTTGCCAAAATAACTATCTTCGAtgtcttcaaaaaatatttc
ttttctttaccAGATTGATCATTGGTGCACCGAACCATAGCAATCGAGCT
GGAGCAGTCTATAGTTGCCGTGTCAATGGTAATGATAATTCCTGCTCCAA
GATGGACGCTGTGGCCAGCTCAAACACGGAAATACCTGGA Coding sequence (CDS) from alignment at sc0000329_pilon:51234..53323+ >XLOC_038896 ID=XLOC_038896|Name=XLOC_038896|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=618bp|location=Sequence derived from alignment at sc0000329_pilon:51234..53323+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacTGACAAAGGTAGATTATGGATCACATTACTATTAAACTATTTGGC
GCTCTCGCAATCCTTTAATGTGGACAGCGAAGCCAATCGGTTGGAGTTCT
CCATTAGCGGTGGTTCCGGTGAAGACAAATCAAGTTTCTTTGGTTATTCC
ATTGGTCTCTTCAAAACTTTAGCTGATGCAAGatgacTGACAAAGGTAGA
TTATGGATCACATTACTATTAAACTATTTGGCGCTCTCGCAATCCTTTAA
TGTGGACAGCGAAGCCAATCGGTTGGAGTTCTCCATTAGCGGTGGTTCCG
GTGAAGACAAATCAAGTTTCTTTGGTTATTCCATTGGTCTCTTCAAAACT
TTAGCTGATGCAAGATTGATCATTGGTGCACCGAACCATAGCAATCGAGC
TGGAGCAGTCTATAGTTGCCGTGTCAATGGTAATGATAATTCCTGCTCCA
AGATGGACGCTGTGGCCAGCTCAAACACGGAAATACCTGGAATTGATCAT
TGGTGCACCGAACCATAGCAATCGAGCTGGAGCAGTCTATAGTTGCCGTG
TCAATGGTAATGATAATTCCTGCTCCAAGATGGACGCTGTGGCCAGCTCA
AACACGGAAATACCTGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000329_pilon | genome | sc0000329_pilon:51234..53323 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 184-309:1965 |
| Aaloc | 1-180:1 |
|
