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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:688392..691244+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038893 ID=XLOC_038893|Name=XLOC_038893|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2853bp|location=Sequence derived from alignment at sc0000005_pilon:688392..691244+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTCAAATCACCAGAATGCGTTTACTGCAGTCGAACATACAGCAA
ATTCAACGAACCCATCTATATCGTATGTCTGTGTGAGCAAAGTGCTAAAT
ATGCCCATGGAAGTTGTTTTCGTGGATATCTCTCTGATCACAGCTTTGGT
GTTTGTGGGCACTGCTTCACCAAAACTAGAATAGTCACGGATGGTTACAA
ACCCTTCTCTGAGGTAAGTTAGTTCATCTTGATATTTCTTtgcgttaaga
tgtaataaaagaatctcattactttttctaaagaacgcgtcatctctatc
actttaaatgaccaattagtgaagtatcttgtaaaaactccagctcatcc
cgtacgaatttgacgaaaaaaaatccttttcgcgagcataatctttcgcg
aatcaagacatgaaaaaatgataaatttcacatgaaaaaattgacaaata
ctTCTTTATGGTAATAGGCTCgaaacttttgtcttttgaatCATTAGGCT
TTAACAGGGTAGAAAGTACCATAaatgttacattttattcaaagtttgaa
attttacagattttcttttttttttaagaacttttttgcAACCATAATGG
CGAATGGCCcttccaagaattttctgagacatttattttcgcgaaaagtG
TCAAGATTTgcgaaaatcgtgaaagtttctgctcgcgaaagtttgtacgc
ctaaaataTATGCAAGATACTCAAAATAGATACTCAAAACTCTTTCTGTT
TATTTCCGTTGTATGCTTTGTAGTTTACGATCAATGAAAAATCACTTTCT
GTTCGGAGATATTTGAAATGACGTGGTTTTGGGTATACGTCAAACATTCG
GAAAACGTCATTAAATTTTCTTCTCGGGAACGGAACATATTTGGCGCAAA
TCTTGAAACAACTGTACGACTTTTTCCTGTTATCAATGATCCTTTATGCA
AATACATTTTTCGACACTGGCAAGGTTCCAACTAAACTTTCAGCAAATTG
ATAAAGAAGGTTGCTGCATGGCGGCTGAATCTTCGCTTTAAGCAATTAAC
ATTACCTTTTTCAGTGCGCAATTTTTGTGATTTATTGACTGATTTGTTGC
GGTCTTAATTCCTAcacaaaaattacctcaaaaGTCATAAATTGAAAAGT
GCAATTTTGATGTTGTGATTTATTTGACATTGTGCTTGAACTCCATAAAT
TGATCGGTCAGGTCAATACACAACAAAGGATACCGCGCACTCAACACCTG
CCTTCAATTTAGTGTTTCATTAAAATTGTGGCTACTATAAATGCAAACAA
AATTCATCCACATGAAAAGTTTGTCTTTTCGTAAGCTTCAATTATGCCAC
ATGCTCTAAATTTCTAAAAGCAATAGTCTTTTCAAGGAAGTAATTGTATT
TCGGAATTTCTGTTGTTCAAAATATTAGGGAAGGCTTAGGAAgtctaaat
atttttcattatccATAATGAATTCCTATGTTCTGCTCATCCCCAATGTT
ATATGATTAACTTTCCAGTTTTCCTCTCTTTCCATTTCTGaatatttaca
aatttaaaTCCAACATATCATCAAATGAAATTACATGTTTTATAAgagaa
ctatataagaacataaggcctcTATGACCAAactgttaagaacaagttaa
gaacattttaaagctttgcagacagaaatttgaaaaagttaaaaattctt
taggaaaaaaacgtgtaagtgtTAACTTCGAATGttgtgaaaatgatttc
ttttgtctctttttcagTGGAAAGTGAAGTGGAAGCCATTTTGTGGATTC
TGGAAACGTTTTAACCAGAACAACAAATACTCGAAGATCGTCTACTGTCA
TGAAGTTCAAGTCAACAAACATAAGAAGAAGATCACATACGAAGATGTTC
CCTCTGAAATCCCATGGAAGAATGAAATTGAAGTCGAAGAAGAAACCAAT
ACCCTGTTCGAAATCCCTGGTGTTGTCGAGAAACAGCAATCCCTAGACGA
AGGTGATGGTTCTAGTGATAATGCACTTGAAAGTGAACCTGAAAACCGAC
AAATTAATCGACTTCCAACGGTCTTTAAACCAAGAGGATATCCCTTCGTC
AAACGACAACAAGAGGATACAGCGGCTGGAAATCTTGAATCTTCATTTGA
GTATTATATGAACTCAAGCAACCGTGGTAGTTTCAGGAGCCAAAGAAACT
TTTACGATAATAACTCCATTTACACCATTACAACAGAAACGAACGATTCG
CCTTCTGAATACCAATACAGCGCTTCGGAAGATGATAATAAAAGTACCGT
ATCCAATCAAAACAGGCGTGCATCGAAACTACGCACCATTGGGCGGTCCT
TTATGAAGAAACTCACTTCAGAGCGTAGTTTTGAAGAAGCGAGCAGCGAG
AGCGGCGCCAGTCGGCGGCCATCCAATAACAATACCGTACAACAATTTTA
CACTATTTCCGAACTCCAAAATACAGAGGAAAAAGAGGAAGTAGCCGTGT
TACCTAGAGACAATGATATTATTTACATGCATTCAAGaactaattcaaat
ttacaAGAAGACTATTGGGGTATGAATCATCAAGAGGACGTCAATGCTGA
TGCTAAGAAGAAGAAGTTCACCAAAAGTCGCAACAAAATGAAGGGTTCAG
CTTCTTCAAATTCAACCTCGTCTACAGCATCTTTCAATAACGATTCTTCA
ACAAAATTATACGGTGTTTCAACTAACATGTTCCGACATAATTCGAACAC
TATGGCGGATGCACCAGAGCCTCGAACCTCTTTTACCAAGACTCGTATTT
CTACCGGTACAGTAGATAAGGAGCGTCAAACAAATCTTTTCTATGCTCCT
TAA Coding sequence (CDS) from alignment at sc0000005_pilon:688392..691244+ >XLOC_038893 ID=XLOC_038893|Name=XLOC_038893|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2598bp|location=Sequence derived from alignment at sc0000005_pilon:688392..691244+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTCAAATCACCAGAATGCGTTTACTGCAGTCGAACATACAGCAA
ATTCAACGAACCCATCTATATCGTATGTCTGTGTGAGCAAAGTGCTAAAT
ATGCCCATGGAAGTTGTTTTCGTGGATATCTCTCTGATCACAGCTTTGGT
GTTTGTGGGCACTGCTTCACCAAAACTAGAATAGTCACGGATGGTTACAA
ACCCTTCTCTGAGATGGAGTTCAAATCACCAGAATGCGTTTACTGCAGTC
GAACATACAGCAAATTCAACGAACCCATCTATATCGTATGTCTGTGTGAG
CAAAGTGCTAAATATGCCCATGGAAGTTGTTTTCGTGGATATCTCTCTGA
TCACAGCTTTGGTGTTTGTGGGCACTGCTTCACCAAAACTAGAATAGTCA
CGGATGGTTACAAACCCTTCTCTGAGTGGAAAGTGAAGTGGAAGCCATTT
TGTGGATTCTGGAAACGTTTTAACCAGAACAACAAATACTCGAAGATCGT
CTACTGTCATGAAGTTCAAGTCAACAAACATAAGAAGAAGATCACATACG
AAGATGTTCCCTCTGAAATCCCATGGAAGAATGAAATTGAAGTCGAAGAA
GAAACCAATACCCTGTTCGAAATCCCTGGTGTTGTCGAGAAACAGCAATC
CCTAGACGAAGGTGATGGTTCTAGTGATAATGCACTTGAAAGTGAACCTG
AAAACCGACAAATTAATCGACTTCCAACGGTCTTTAAACCAAGAGGATAT
CCCTTCGTCAAACGACAACAAGAGGATACAGCGGCTGGAAATCTTGAATC
TTCATTTGAGTATTATATGAACTCAAGCAACCGTGGTAGTTTCAGGAGCC
AAAGAAACTTTTACGATAATAACTCCATTTACACCATTACAACAGAAACG
AACGATTCGCCTTCTGAATACCAATACAGCGCTTCGGAAGATGATAATAA
AAGTACCGTATCCAATCAAAACAGGCGTGCATCGAAACTACGCACCATTG
GGCGGTCCTTTATGAAGAAACTCACTTCAGAGCGTAGTTTTGAAGAAGCG
AGCAGCGAGAGCGGCGCCAGTCGGCGGCCATCCAATAACAATACCGTACA
ACAATTTTACACTATTTCCGAACTCCAAAATACAGAGGAAAAAGAGGAAG
TAGCCGTGTTACCTAGAGACAATGATATTATTTACATGCATTCAAGaact
aattcaaatttacaAGAAGACTATTGGGGTATGAATCATCAAGAGGACGT
CAATGCTGATGCTAAGAAGAAGAAGTTCACCAAAAGTCGCAACAAAATGA
AGGGTTCAGCTTCTTCAAATTCAACCTCGTCTACAGCATCTTTCAATAAC
GATTCTTCAACAAAATTATACGGTGTTTCAACTAACATGTTCCGACATAA
TTCGAACACTATGGCGGATGCACCAGAGCCTCGAACCTCTTTTACCAAGA
CTCGTATTTCTACCGGTACAGTAGATAAGGAGCGTCAAACAAATCTTTTC
TATGCTCCTTAATGGAAAGTGAAGTGGAAGCCATTTTGTGGATTCTGGAA
ACGTTTTAACCAGAACAACAAATACTCGAAGATCGTCTACTGTCATGAAG
TTCAAGTCAACAAACATAAGAAGAAGATCACATACGAAGATGTTCCCTCT
GAAATCCCATGGAAGAATGAAATTGAAGTCGAAGAAGAAACCAATACCCT
GTTCGAAATCCCTGGTGTTGTCGAGAAACAGCAATCCCTAGACGAAGGTG
ATGGTTCTAGTGATAATGCACTTGAAAGTGAACCTGAAAACCGACAAATT
AATCGACTTCCAACGGTCTTTAAACCAAGAGGATATCCCTTCGTCAAACG
ACAACAAGAGGATACAGCGGCTGGAAATCTTGAATCTTCATTTGAGTATT
ATATGAACTCAAGCAACCGTGGTAGTTTCAGGAGCCAAAGAAACTTTTAC
GATAATAACTCCATTTACACCATTACAACAGAAACGAACGATTCGCCTTC
TGAATACCAATACAGCGCTTCGGAAGATGATAATAAAAGTACCGTATCCA
ATCAAAACAGGCGTGCATCGAAACTACGCACCATTGGGCGGTCCTTTATG
AAGAAACTCACTTCAGAGCGTAGTTTTGAAGAAGCGAGCAGCGAGAGCGG
CGCCAGTCGGCGGCCATCCAATAACAATACCGTACAACAATTTTACACTA
TTTCCGAACTCCAAAATACAGAGGAAAAAGAGGAAGTAGCCGTGTTACCT
AGAGACAATGATATTATTTACATGCATTCAAGaactaattcaaatttaca
AGAAGACTATTGGGGTATGAATCATCAAGAGGACGTCAATGCTGATGCTA
AGAAGAAGAAGTTCACCAAAAGTCGCAACAAAATGAAGGGTTCAGCTTCT
TCAAATTCAACCTCGTCTACAGCATCTTTCAATAACGATTCTTCAACAAA
ATTATACGGTGTTTCAACTAACATGTTCCGACATAATTCGAACACTATGG
CGGATGCACCAGAGCCTCGAACCTCTTTTACCAAGACTCGTATTTCTACC
GGTACAGTAGATAAGGAGCGTCAAACAAATCTTTTCTATGCTCCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:688392..691244 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 214-1299:1768 |
| Aaloc | 1-213:1 |
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