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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:1343590..1345674- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038819 ID=XLOC_038819|Name=XLOC_038819|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2085bp|location=Sequence derived from alignment at sc0000005_pilon:1343590..1345674- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAATAAGACGAAAAGGCAGAGAGACCCATTTTTATTTTCTGTTTGTCT
TTCACAAGTCAATAGTAAAAGGACAAGAAAACGAAAAGTAAAGAAAAAAC
CATATTTCATTACCCCTGAAAGAAAAGGGGCAAAAAGGTAAGAATTTGTT
TAACTTTACATATTCTGCTTTTATTATTTGTAAGGAAGGCATTCTTATTT
GCTATCTTGGTATTCTCTAGCACACCCCTCTCTCATAGCCCATCTGGAAT
TCTTTTCCTCAGTTGGGATAAACATTCCTATTGAATTCCCGATGGGGATA
GAAATTCTATAGTTCGATAGTTCCAAGGCTAGAACATCCAGTGAGGATGG
TTTACAATTTTTAAACATTGAATTTTGAATGGGGATGAAATCAAAGTCAT
TTTCCCAGCAGGGCTGAAATTCTAGGGTATTTTCCCACCGGGGACGAATT
TTTTGCCAAATTTTCCAGTGGGTCTGTGACACAGGGGTGTTCTAGCGAGA
AAACAAACCATGTTTCTTTCTGTCAGCGATGTAAGTAGTGAAGCTGTCGG
CAATGTCACTTATTTGAAGAAAGAGCAGAGAAGGAGCAGAAAAAACATTA
AGACGGTTCGTAAACACTGCAGACCAAAAATAGGGCCGTTTTTAGTCCGA
GTCTTGTACAAAAGATTTCTCCTAAAATTTTAAACATTTTCTTTTCGATT
AATAGGAGCTCGATGAGAATGGCGAATAAATACGGAAGAAATGCGAAACT
AATTTTATTTTTACTTGCCGAATCAACGAAAAGACAATCACACATTAGCC
GCTTGTTAGACATAATGCATGGCTTGACCACAATCTATAACGTTCGTTTG
GTAAATGAAAAAAATTTGTATGCTACTTACATACAAGAATCTTGTGAAAA
ATTAGTCATTGTTTTGTTCAATGAGGATGGTCTGGGAAATAGACAGTTTC
GTGAATGTTTACGAACATCCCTAGCAGCAAAATTGGACATTATTGGTGTT
CTTGACGAAGGTGTATCACGAGAAAGAGTCCTCAGCTTTTTCTCTTTCAA
CAATAAGCGAAAACAAATGCTGGAAGAAATTGTCACAAGTGCATTCTGTT
TCCAGAAAGACTGTCTGTTCAAAGCAACACCATTAGTTGATCGCATACAG
CAATTATGCAGACCGGTATCTTCCCGGATAAGCGATCGCCCGCGTTTACC
AAAGATAACCGAACCCAACGTCAATCTGGAAGCTTGTTTAAAATCAAAGA
AAGTGATTTTGAAACCCATGTCTCGAGCACCTCCACGAACTTTATTTTCA
TGCACCTTCACCAGAAAACTGAACTCCCACTCCTGAAGCCTCAAAAATCA
TCCGCAGGGCAAATCAGAAGTCTTCCAAGACCGAGGAATATCCAAAACAC
AAATGTCATTTATCCAAAGATTGAAATCTCACAAGGATTCCCCACTCAAG
TTATAAAGAAACGTACAAGCTCAACATCATCAGCTCGTAGTAAAATACCA
ATCAAGCAATTGACATGTCCGATAATTGAAATCAGCCAAGATGACGATTC
GGACGATATTCCGGACACTCCAGATGCGATCACTGAAAAGCAAGACCGGT
TGCCATGGACAATTACCACAACAACAACGCTAGATGATCCAGGGGCAAAC
AGAGATGAGTTTAATCTTGAAATTGAAGGCGATTGTGAGCGAAGACTTTC
GTTTGACTACGTCTCGAAAACGTATATCGTGTTTGATCCAAAGAAGAAGA
AAACCCTACACGTCAATTTCCCTAATGGTTGCAGCATTTTGAGGCGTGAA
AGTTTACATGATATCCTGTCCAACGTTTCGTCACGCAGAAATTCATTCTT
GTGGAGCAACAGTGCAAGTTCTTCAACAGATGAAATCAATCTTGAATCTA
AGTTCGATTCGGTCAATATCTTGGACTCACCAATTCCCTCGCCAACAATG
AGAAGAAGCAATGTGATTTATCAAAATCCACTTCCTGTTTACCCAGATGA
AATTTGTTTTCCACCGGTGGAAAAATTCCCATGTGACACTTTACAGATGA
GAAGGCCGTCAGTATTTGACGTCTTATTGCATTAA Coding sequence (CDS) from alignment at sc0000005_pilon:1343590..1345674- >XLOC_038819 ID=XLOC_038819|Name=XLOC_038819|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3034bp|location=Sequence derived from alignment at sc0000005_pilon:1343590..1345674- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAATAAGACGAAAAGGCAGAGAGACCCATTTTTATTTTCTGTTTGTCT
TTCACAAGTCAATAGTAAAAGGACAAGAAAACGAAAAGTAAAGAAAAAAC
CATATTTCATTACCCCTGAAAGAAAAGGGGCAAAAAGTTTAATAAGACGA
AAAGGCAGAGAGACCCATTTTTATTTTCTGTTTGTCTTTCACAAGTCAAT
AGTAAAAGGACAAGAAAACGAAAAGTAAAGAAAAAACCATATTTCATTAC
CCCTGAAAGAAAAGGGGCAAAAAGGAGCTCGATGAGAATGGCGAATAAAT
ACGGAAGAAATGCGAAACTAATTTTATTTTTACTTGCCGAATCAACGAAA
AGACAATCACACATTAGCCGCTTGTTAGACATAATGCATGGCTTGACCAC
AATCTATAACGTTCGTTTGGTAAATGAAAAAAATTTGTATGCTACTTACA
TACAAGAATCTTGTGAAAAATTAGTCATTGTTTTGTTCAATGAGGATGGT
CTGGGAAATAGACAGTTTCGTGAATGTTTACGAACATCCCTAGCAGCAAA
ATTGGACATTATTGGTGTTCTTGACGAAGGTGTATCACGAGAAAGAGTCC
TCAGCTTTTTCTCTTTCAACAATAAGCGAAAACAAATGCTGGAAGAAATT
GTCACAAGTGCATTCTGTTTCCAGAAAGACTGTCTGTTCAAAGCAACACC
ATTAGTTGATCGCATACAGCAATTATGCAGACCGGTATCTTCCCGGATAA
GCGATCGCCCGCGTTTACCAAAGATAACCGAACCCAACGTCAATCTGGAA
GCTTGTTTAAAATCAAAGAAAGTGATTTTGAAACCCATGTCTCGAGCACC
TCCACGAACTTTATTTTCATGCACCTTCACCAGAAAACTGAACTCCCACT
CCTGAAGCCTCAAAAATCATCCGCAGGGCAAATCAGAAGTCTTCCAAGAC
CGAGGAATATCCAAAACACAAATGTCATTTATCCAAAGATTGAAATCTCA
CAAGGATTCCCCACTCAAGTTATAAAGAAACGTACAAGCTCAACATCATC
AGCTCGTAGTAAAATACCAATCAAGCAATTGACATGTCCGATAATTGAAA
TCAGCCAAGATGACGATTCGGACGATATTCCGGACACTCCAGATGCGATC
ACTGAAAAGCAAGACCGGTTGCCATGGACAATTACCACAACAACAACGCT
AGATGATCCAGGGGCAAACAGAGATGAGTTTAATCTTGAAATTGAAGGCG
ATTGTGAGCGAAGACTTTCGTTTGACTACGTCTCGAAAACGTATATCGTG
TTTGATCCAAAGAAGAAGAAAACCCTACACGTCAATTTCCCTAATGGTTG
CAGCATTTTGAGGCGTGAAAGTTTACATGATATCCTGTCCAACGTTTCGT
CACGCAGAAATTCATTCTTGTGGAGCAACAGTGCAAGTTCTTCAACAGAT
GAAATCAATCTTGAATCTAAGTTCGATTCGGTCAATATCTTGGACTCACC
AATTCCCTCGCCAACAATGAGAAGAAGCAATGTGATTTATCAAAATCCAC
TTCCTGTTTACCCAGATGAAATTTGTTTTCCACCGGTGGAAAAATTCCCA
TGTGACACTTTACAGATGAGAAGGCCGTCAGTATTTGACGTCTTATTGCA
TTAAGAGCTCGATGAGAATGGCGAATAAATACGGAAGAAATGCGAAACTA
ATTTTATTTTTACTTGCCGAATCAACGAAAAGACAATCACACATTAGCCG
CTTGTTAGACATAATGCATGGCTTGACCACAATCTATAACGTTCGTTTGG
TAAATGAAAAAAATTTGTATGCTACTTACATACAAGAATCTTGTGAAAAA
TTAGTCATTGTTTTGTTCAATGAGGATGGTCTGGGAAATAGACAGTTTCG
TGAATGTTTACGAACATCCCTAGCAGCAAAATTGGACATTATTGGTGTTC
TTGACGAAGGTGTATCACGAGAAAGAGTCCTCAGCTTTTTCTCTTTCAAC
AATAAGCGAAAACAAATGCTGGAAGAAATTGTCACAAGTGCATTCTGTTT
CCAGAAAGACTGTCTGTTCAAAGCAACACCATTAGTTGATCGCATACAGC
AATTATGCAGACCGGTATCTTCCCGGATAAGCGATCGCCCGCGTTTACCA
AAGATAACCGAACCCAACGTCAATCTGGAAGCTTGTTTAAAATCAAAGAA
AGTGATTTTGAAACCCATGTCTCGAGCACCTCCACGAACTTTATTTTCAT
GCACCTTCACCAGAAAACTGAACTCCCACTCCTGAAGCCTCAAAAATCAT
CCGCAGGGCAAATCAGAAGTCTTCCAAGACCGAGGAATATCCAAAACACA
AATGTCATTTATCCAAAGATTGAAATCTCACAAGGATTCCCCACTCAAGT
TATAAAGAAACGTACAAGCTCAACATCATCAGCTCGTAGTAAAATACCAA
TCAAGCAATTGACATGTCCGATAATTGAAATCAGCCAAGATGACGATTCG
GACGATATTCCGGACACTCCAGATGCGATCACTGAAAAGCAAGACCGGTT
GCCATGGACAATTACCACAACAACAACGCTAGATGATCCAGGGGCAAACA
GAGATGAGTTTAATCTTGAAATTGAAGGCGATTGTGAGCGAAGACTTTCG
TTTGACTACGTCTCGAAAACGTATATCGTGTTTGATCCAAAGAAGAAGAA
AACCCTACACGTCAATTTCCCTAATGGTTGCAGCATTTTGAGGCGTGAAA
GTTTACATGATATCCTGTCCAACGTTTCGTCACGCAGAAATTCATTCTTG
TGGAGCAACAGTGCAAGTTCTTCAACAGATGAAATCAATCTTGAATCTAA
GTTCGATTCGGTCAATATCTTGGACTCACCAATTCCCTCGCCAACAATGA
GAAGAAGCAATGTGATTTATCAAAATCCACTTCCTGTTTACCCAGATGAA
ATTTGTTTTCCACCGGTGGAAAAATTCCCATGTGACACTTTACAGATGAG
AAGGCCGTCAGTATTTGACGTCTTATTGCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:1343590..1345674 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 748-1518:772 |
| Aaloc | 139-744:1380 |
| Aaloc | 1-135:2086 |
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