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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:323377..325947+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038817 ID=XLOC_038817|Name=XLOC_038817|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2571bp|location=Sequence derived from alignment at sc0000117_pilon:323377..325947+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACCTACCCAACTGGCTCTAACGGTGGCGGCGTCGCAGAAGCCAC
CGAAGCGGTCCACAGTGACGAACAGAGCGACGTATTCTTAAAAGACACGA
AAAGTAAATcgaatttatcaatttttcgacATGGCGATTTTCGATATCGT
AAATCGATTTATGCGACATTATTTGCAGTATTTTTCATCGCttcgatttt
gtttttgatgttgtacttgAGGTGTTACGATTCTTATGTTCAATTGGCTG
AACAAAAAGGTATATCTTCTTATCCTTAActcttcttatttatttttgtt
ggtTTATTCTGAGGAGCAATTATATTTGGTtacagaaattttttaaaatt
ggagtataattttccaaagGAAATATCGTCCATATTTTGGCTAAATCTTT
GGAATGGGAATGGGTCCCAACAGGCCTATGAGAAGGGTTTTACAAATGAA
ATTTATCACATAGTATTTTCGTTTGTTTGTCTATTTCATTCGGATTATGG
TTTTTATAAGCACTAAATGGTCGTTGTTTTAATAGTGAATGCAAGGTCTT
TGACTTTCAAGTCGTGTCAACTCTTGAAAtacgtaagtcatttttctagc
ggaagcAACCGAAAAAAGCCAGGATTTCACCCCTCTCTGTTACGGttttt
tttgggtgcttctgttaaaaattatgacgtcattttgactTACGCATATA
TTAAGAATTACCCAGATGATAATGGACAGaccttaatttttctttgaaat
cttAATATTAAATAtctttcgtttattttgaatattattgAGATGGGACT
GACCTTAGTGAAATGAGTCATttagaaaaacttcaaaagtaaCAGGATAA
ACTCGACAAAGTCTCACCTCgtgaaaaagttcaaaaaagaaAGGTCTTAT
TCTGTGTtataaaattaagtaaaataaTAACCAATCTCCCCTTAATATTA
AAATTTGACCCTAACCCAGATCATAAAAAGCCGAGAGGGAGGTCAGTGTT
TATCAATTCAATTTATCTCTTGTCACTgaatatataaattatttttaatg
tccCTCTCATCTTGACTCccttttcttgaaaaaacgtGTTTTCATCAAAT
GGGATATTTTACAAATTCTTCTACTCCCTCCTTGTTCGcttatttaaaat
gaaaactatTGCAAACTCTTATCTGGAGAATCTATTTGGGATAGTTATac
tgtctttttattttcaccagGACTCGACAAATAAGTAACTTGGAGTAGTC
AAGGGGATGGCCTGTTTCGGAAGAATTGTCTTTGAGGATAGGGACTTTTT
Ctagcgtgattgcgtgatttgaaatttttttcttcgtgattgcgtgatca
gaggtcaaaacgtgatcgtgatttaaaagacttttgagccgtgatgcgtg
atttagACATTTCCAAAGGGGTGCGTGATCatccaatttttttgctgttt
tatgcgtgatatcgtgatcagagttactgCTggggggaggggggCTCTAA
GCTTACCaaaaaaaaTAGTTTAGATAATAGTCATGAGAAGGTAAGATAAG
GCACGTTTTGCTCTTGATACCTACAAACTTACTGTCTAACAGAATTGAAA
ATGTGTTGtttgttttcagaaattttcgagTTGCGATATCAAGGGTGTAT
CGGTTGTTCGAGTTCTCGATCGTATTGTTCGAATCAAACGGGTGAATATC
GATGTCATTGCAAACGAGGTTACTTCGACGACAATGGGGTGTGTCAATGT
GAGtcgttttaaagtcgttttagaatcgttttaaagtcgttttagaatca
ttttaaaatcgttttaaCTCATTCTAATAATCAGGGTCAATAGATCTTAt
aggagtttttgatttttctaagaaaaatgcATCATttcattgtgggattg
tttttggagtattacaatagaattctctCGAGGatgaattcctaagagat
tcaaattccaaagattcaaattgaattttcttcttctttctagATACATC
ATTTTCGATGAAACTCGGTAACAAAACACACAATCTGcccatcaaagatg
aagagaaaGACAAACAAACTTCTATTCTATCTGTTTGTTTTTGGATACGC
GCTGAGAAAGGAAGTTCAGATTCGACTCTTCAAATTCTACAGTCTAAAGA
TACAGACTTCTCACTCAGTGTAGACGGGGCTGGAAATCTTCAAGTTAAAT
TTCCTTCCTTTCGAACGCCGAGGGTCGTCGATTTGCGTTCTCCTTTGAAT
CGGTGGACACATTTATGTGTTTCAATGAGAAGACTTTTATCTGTTTACGT
CAACGGAAAATCACATCGTAGTATGACCATTGATGTGCTAGGAATGACCA
GTATTGAATCACTTTTACACTTTGGTCAACGGAATAAGGGTACATATAAT
TGGGACATTTCAGACTATTACCTCTTGCGACAAGAACTTCAAGGGAgaga
tgttttgaatttttttccatccaACACAGGGATACATCCCTATGAATACC
TTGTCACTTGGAATGATGTGGTTTCTTACGCTCAAAATAATTCCATACCT
TTGAGGAAATTTCTTTTGTGA Coding sequence (CDS) from alignment at sc0000117_pilon:323377..325947+ >XLOC_038817 ID=XLOC_038817|Name=XLOC_038817|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1932bp|location=Sequence derived from alignment at sc0000117_pilon:323377..325947+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACCTACCCAACTGGCTCTAACGGTGGCGGCGTCGCAGAAGCCAC
CGAAGCGGTCCACAGTGACGAACAGAGCGACGTATTCTTAAAAGACACGA
AAAGTAAATcgaatttatcaatttttcgacATGGCGATTTTCGATATCGT
AAATCGATTTATGCGACATTATTTGCAGTATTTTTCATCGCttcgatttt
gtttttgatgttgtacttgAGGTGTTACGATTCTTATGTTCAATTGGCTG
AACAAAAAGATGGAGACCTACCCAACTGGCTCTAACGGTGGCGGCGTCGC
AGAAGCCACCGAAGCGGTCCACAGTGACGAACAGAGCGACGTATTCTTAA
AAGACACGAAAAGTAAATcgaatttatcaatttttcgacATGGCGATTTT
CGATATCGTAAATCGATTTATGCGACATTATTTGCAGTATTTTTCATCGC
ttcgattttgtttttgatgttgtacttgAGGTGTTACGATTCTTATGTTC
AATTGGCTGAACAAAAAGaaattttcgagTTGCGATATCAAGGGTGTATC
GGTTGTTCGAGTTCTCGATCGTATTGTTCGAATCAAACGGGTGAATATCG
ATGTCATTGCAAACGAGGTTACTTCGACGACAATGGGGTGTGTCAATaaa
ttttcgagTTGCGATATCAAGGGTGTATCGGTTGTTCGAGTTCTCGATCG
TATTGTTCGAATCAAACGGGTGAATATCGATGTCATTGCAAACGAGGTTA
CTTCGACGACAATGGGGTGTGTCAATATACATCATTTTCGATGAAACTCG
GTAACAAAACACACAATCTGcccatcaaagatgaagagaaaGACAAACAA
ACTTCTATTCTATCTGTTTGTTTTTGGATACGCGCTGAGAAAGGAAGTTC
AGATTCGACTCTTCAAATTCTACAGTCTAAAGATACAGACTTCTCACTCA
GTGTAGACGGGGCTGGAAATCTTCAAGTTAAATTTCCTTCCTTTCGAACG
CCGAGGGTCGTCGATTTGCGTTCTCCTTTGAATCGGTGGACACATTTATG
TGTTTCAATGAGAAGACTTTTATCTGTTTACGTCAACGGAAAATCACATC
GTAGTATGACCATTGATGTGCTAGGAATGACCAGTATTGAATCACTTTTA
CACTTTGGTCAACGGAATAAGGGTACATATAATTGGGACATTTCAGACTA
TTACCTCTTGCGACAAGAACTTCAAGGGAgagatgttttgaatttttttc
catccaACACAGGGATACATCCCTATGAATACCTTGTCACTTGGAATGAT
GTGGTTTCTTACGCTCAAAATAATTCCATACCTTTGAGGAAATTTCTTTT
GTGAATACATCATTTTCGATGAAACTCGGTAACAAAACACACAATCTGcc
catcaaagatgaagagaaaGACAAACAAACTTCTATTCTATCTGTTTGTT
TTTGGATACGCGCTGAGAAAGGAAGTTCAGATTCGACTCTTCAAATTCTA
CAGTCTAAAGATACAGACTTCTCACTCAGTGTAGACGGGGCTGGAAATCT
TCAAGTTAAATTTCCTTCCTTTCGAACGCCGAGGGTCGTCGATTTGCGTT
CTCCTTTGAATCGGTGGACACATTTATGTGTTTCAATGAGAAGACTTTTA
TCTGTTTACGTCAACGGAAAATCACATCGTAGTATGACCATTGATGTGCT
AGGAATGACCAGTATTGAATCACTTTTACACTTTGGTCAACGGAATAAGG
GTACATATAATTGGGACATTTCAGACTATTACCTCTTGCGACAAGAACTT
CAAGGGAgagatgttttgaatttttttccatccaACACAGGGATACATCC
CTATGAATACCTTGTCACTTGGAATGATGTGGTTTCTTACGCTCAAAATA
ATTCCATACCTTTGAGGAAATTTCTTTTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:323377..325947 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 391-966:1996 |
| Aaloc | 262-387:1622 |
| Aaloc | 1-258:1 |
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