|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:212236..214156+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038813 ID=XLOC_038813|Name=XLOC_038813|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1921bp|location=Sequence derived from alignment at sc0000117_pilon:212236..214156+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATATGTCCACCACTATCTCGATGCATCAGCTCGTGGAGATCCTATCCG
AATTGTTTTCTACGCTGCTGGGGTGGAATTTGAAGAGAAATTGTACACGT
TTGCTTGCATGCCCAAGATTAAAGCTGATGGTAAGCTGAAATTTAGTGTT
CGATTTAAAGCCAGAAgtgctagagaggaatcttcaacctttatCAGACA
AGAAAATACCTTAGGATTTGCTCCGCTTTTAGACATATTGAATCTAgagc
tttctttgatttcttacAGCATAATATTCAAAAGAAGccgatggatttta
ctttcaatctggcattCTTTTCCCATTCAAGAATTTCCACTTTTAAGCCC
TTCGGGACTAAATGGGTCTACCTTATTCGAAGGATCGCCTTTAACAAAAC
TAAACCTAGCCTTGCAGATTAGAAGATTGTCTCATCAGAGAGCATAataa
aacgtcaattttaaactttctcATTTCAGAAAAGACCTTTCCCCTTGGAC
AAGTACCAGCTTTGCAAATCGATGGAGAATCATATGTTCAATCACACGcc
attttgagatatttaggAAACGAATTCAATTTGTATGGCATGTGCAACAA
ACAGAAATTGGTCATCGATGAAATCTTGTACACTTTATTGGATCTTGAAG
ACCAATCCTTCCCCACTTTCTTCTTTACACCAAAATGTCAAAAGGTAAAG
AAAACAGACTTCCCTTTAGACTTCAAAAACTGTTGAGTAGATGGAACAAA
CTGTTCTTTCCTCTTAAATGTTAAATTTCTACATTTAGTCTTCAGAACCT
TTTACTGTAGGGGGCGCCTAAATTATCTGCGTTCCAAAGCTTCTATTATT
CATCGCTGTTTCTAATTATCTTATACTTCATCAGgatgagaaattgaaaa
aattacacGACTATGCTGTCCGAGCTTACAAAATGTTTGAAGGAATATTA
CAGAAGAATAACAAAGGAAAAGAATACTTCGTTGGAAACAAGGTAAGTGT
CCTTCTCATTCAAAAACatacaaattattttcaagtaGCCACTGTTGAAA
TGTTTGGGCTGTGTAAATCCctgaattacacgtttttttatatgaacaaa
ctatacgaacataaggctttgatggccaaaatactaagaataagttatga
acattttaaggcttcgtggactctaAAACGCCCGATTTCTtcggaaaatg
gacaaaaatattaaaaaaaacggtGAAATTGCTCTTTCTACTTTCAGCTC
TCAATCGCAGACCTGCATTTGGTCATATCCCTGGAAACCctaaagctaag
gctacactgatagttttttcaggcggctgcaatgcaattgttgcattgca
gccgcctgaaaatTGTTGCTGTCTagccatttaaaaaaaggaaccaggaa
aaacgtcaaaaaaacattcgaattacaaaacattcgaattacaaaacatt
cgaactacaaaacattcgaattacaaaacattcgattttatcaaaaatat
tcgaTTTTCGAAGGTCTGACGTTCGAATGACGTAATAAGATTGGAATGTC
AGATACATCGTCaaaaaaaTTGCAGATTcttctgcaacaaaatcagttca
aactgattttgttgcagacaCTTGCAATTTgttctgcaatatttttattg
cgttgcagaggaattgcagaaaaaattgacgtgctacattttgcaatttc
tcgCGCGTTTGCAACGCAACGCtaattgcattgcagccgcctgaaaaaac
tatcagtgtagccttagcttaagTCTTGAAGAAAACACTCTTCCAGAATT
CAAGAATTTCATAGACAACTATCCATTGGTCAAAGCTCTAAACGAACGAG
TTCGAAATCTCGAAAATGTCAAGATATTTTTGGAGAAACGAGGACCACCA
TCGTACAAATTGATCCGAGAA Coding sequence (CDS) from alignment at sc0000117_pilon:212236..214156+ >XLOC_038813 ID=XLOC_038813|Name=XLOC_038813|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1296bp|location=Sequence derived from alignment at sc0000117_pilon:212236..214156+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATATGTCCACCACTATCTCGATGCATCAGCTCGTGGAGATCCTATCCG
AATTGTTTTCTACGCTGCTGGGGTGGAATTTGAAGAGAAATTGTACACGT
TTGCTTGCATGCCCAAGATTAAAGCTGATGAAATATGTCCACCACTATCT
CGATGCATCAGCTCGTGGAGATCCTATCCGAATTGTTTTCTACGCTGCTG
GGGTGGAATTTGAAGAGAAATTGTACACGTTTGCTTGCATGCCCAAGATT
AAAGCTGATGAAAAGACCTTTCCCCTTGGACAAGTACCAGCTTTGCAAAT
CGATGGAGAATCATATGTTCAATCACACGccattttgagatatttaggAA
ACGAATTCAATTTGTATGGCATGTGCAACAAACAGAAATTGGTCATCGAT
GAAATCTTGTACACTTTATTGGATCTTGAAGACCAATCCTTCCCCACTTT
CTTCTTTACACCAAAATGTCAAAAGAAAAGACCTTTCCCCTTGGACAAGT
ACCAGCTTTGCAAATCGATGGAGAATCATATGTTCAATCACACGccattt
tgagatatttaggAAACGAATTCAATTTGTATGGCATGTGCAACAAACAG
AAATTGGTCATCGATGAAATCTTGTACACTTTATTGGATCTTGAAGACCA
ATCCTTCCCCACTTTCTTCTTTACACCAAAATGTCAAAAGgatgagaaat
tgaaaaaattacacGACTATGCTGTCCGAGCTTACAAAATGTTTGAAGGA
ATATTACAGAAGAATAACAAAGGAAAAGAATACTTCGTTGGAAACAAGga
tgagaaattgaaaaaattacacGACTATGCTGTCCGAGCTTACAAAATGT
TTGAAGGAATATTACAGAAGAATAACAAAGGAAAAGAATACTTCGTTGGA
AACAAGCTCTCAATCGCAGACCTGCATTTGGTCATATCCCTGGAAACCct
aaagCTCTCAATCGCAGACCTGCATTTGGTCATATCCCTGGAAACCctaa
agCTTGAAGAAAACACTCTTCCAGAATTCAAGAATTTCATAGACAACTAT
CCATTGGTCAAAGCTCTAAACGAACGAGTTCGAAATCTCGAAAATGTCAA
GATATTTTTGGAGAAACGAGGACCACCATCGTACAAATTGATCCGAGAAC
TTGAAGAAAACACTCTTCCAGAATTCAAGAATTTCATAGACAACTATCCA
TTGGTCAAAGCTCTAAACGAACGAGTTCGAAATCTCGAAAATGTCAAGAT
ATTTTTGGAGAAACGAGGACCACCATCGTACAAATTGATCCGAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:212236..214156 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 517-663:1775 |
| Aaloc | 469-516:1248 |
| Aaloc | 361-468:885 |
| Aaloc | 148-360:482 |
| Aaloc | 16-144:1 |
|
