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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000097_pilon:205629..207425+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038729 ID=XLOC_038729|Name=XLOC_038729|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1797bp|location=Sequence derived from alignment at sc0000097_pilon:205629..207425+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTACAacactgtgaaaaaaatgaaagttaatgagctgaaaagttt
tctCAGACTTCGAGACATGAGACTTTCTGGGAATAAAGAAAACCTCAGAG
CTAGAGTGTTGGTTGCAATTGAAAATGGGGTGAAGCCTGTAAAAACTGCA
GAGGAAATTGAAGGAGAACTGCTCAGAGAATATAATGATAAACTGACATG
CAAAGGTATCTCAATCCCCGATCCATTCAATCTTCAAGATGGTTGGAAAC
CTGAAGCAATTGGAGTCAAGGAGTGGCCAATGATATCAACATTATATATC
ATAAAATTTCTTATGTTGGATGAAACCATCGGAGACTTGAATGACTACAA
GAAGTCTAAAGCATATAGCTATTTCGAGAGAGGATGGCTTGGAAAGATAG
ACTTTCATCCCTTGAAAGACACACCATTTTGTCTGATGAGAACTGATTGC
CGTCCATCACAGAGAATATCAGACACTCTTCATAAACTTTGGCTGCTTTT
TTCAAAGGACACAGGAAATGTGCTTGAAGCCCACTGTACATGTATGGCAG
GTATGGGTTCTTCCTGTAATCATGTTGCTGCTGCCTTGTTTCGCATTGAG
GCAGCTATGCGTTATGGTTTGTCAAATCCGTCATCAACATCTCTACCAAA
CGAATGGCTACCTAATCGTAATGAGGTACAACCATCTAAAGCAAAGAATA
TTGATTTTAATAGGGATGATTTTGCTAAGCGAGGCAAGTCGAGAAAGAAG
CTTTTTAGTACCCCTAAGAAGAATTATCATCCATTaccaataaaaagaaa
aactacaaaaacactatcttttgaaaaaattgtggaaacgctaaaagaaa
aaGACCTAATGAAGGACACCACACTCTCAACAGCAGCTCCTCAACCTGAG
ATAGACTTTGTTGTTGAATCTGTAAGAAAACCAGATCACGTTTCAGATTT
ACCATGTATTGATGATGTTATTGTTGTTGAATCTGTAAGAAAACCAGATC
ACGTTTCAAATTTACCATGTATTGATGATGTTATTTTAACCTCGAAATCG
ACAGATGAATTTCTGACAAATGTTACCAATGATTTGACCAATGATATTAT
TGATAAAATTGAGGTAGCTACTAAAGGACAGAGTACCAATGAACTATGGT
ATCAACATAGAAAAAGTGTCATAACTGCTTCTAAAGTGCATGAAGTGAAA
ACTAAAATGGAGACTATAAAAGGATATCAGAAAGGGGATGAACGAAGTGA
AGTTTTAATGTGGAGTTTAACGaaaaaaaTAGCTGGGTTTACTTTCTTAA
ACCCAAATAATCCTGCGTTGAAATATGGTAGAGAAATGGAGGGAATGGCA
TCTTCAAAActtcttgattttctaaaaactaAACATAAAGGAGCCAAAAT
CAGAGACTGTGGTTTGCTTCTTCACAAGAATAAACCTTTTATTGGAGCTA
GTCCTGATGGCATATTTTCATGTGATTGCTGTAAGGAGGAAGTGTGTATC
GAAATCAAATGTCCGTATTCAATAAGCTACCTTTCCCCGACTGATGAAAA
TGCAAAGCTTCGTTACATGATAAAAACTGACCAAGGACTGAGATTGAGAG
AATCTCATCAATATTTCAGCCAGTGTCAATTTCAAATGGGTGTGTGgaac
ttgaaaaaatgtttctttttcgtTTATACTGCCCATGGTTTTATATTAAA
TGAAATTAGATttgataccaattttttttctgagttGTCAGAAAAGTGTA
GTAATTTTTATAAAGAATATTATTTACCATCAATTTTCTTAGCTTGA Coding sequence (CDS) from alignment at sc0000097_pilon:205629..207425+ >XLOC_038729 ID=XLOC_038729|Name=XLOC_038729|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3594bp|location=Sequence derived from alignment at sc0000097_pilon:205629..207425+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTACAacactgtgaaaaaaatgaaagttaatgagctgaaaagttt
tctCAGACTTCGAGACATGAGACTTTCTGGGAATAAAGAAAACCTCAGAG
CTAGAGTGTTGGTTGCAATTGAAAATGGGGTGAAGCCTGTAAAAACTGCA
GAGGAAATTGAAGGAGAACTGCTCAGAGAATATAATGATAAACTGACATG
CAAAGGTATCTCAATCCCCGATCCATTCAATCTTCAAGATGGTTGGAAAC
CTGAAGCAATTGGAGTCAAGGAGTGGCCAATGATATCAACATTATATATC
ATAAAATTTCTTATGTTGGATGAAACCATCGGAGACTTGAATGACTACAA
GAAGTCTAAAGCATATAGCTATTTCGAGAGAGGATGGCTTGGAAAGATAG
ACTTTCATCCCTTGAAAGACACACCATTTTGTCTGATGAGAACTGATTGC
CGTCCATCACAGAGAATATCAGACACTCTTCATAAACTTTGGCTGCTTTT
TTCAAAGGACACAGGAAATGTGCTTGAAGCCCACTGTACATGTATGGCAG
GTATGGGTTCTTCCTGTAATCATGTTGCTGCTGCCTTGTTTCGCATTGAG
GCAGCTATGCGTTATGGTTTGTCAAATCCGTCATCAACATCTCTACCAAA
CGAATGGCTACCTAATCGTAATGAGGTACAACCATCTAAAGCAAAGAATA
TTGATTTTAATAGGGATGATTTTGCTAAGCGAGGCAAGTCGAGAAAGAAG
CTTTTTAGTACCCCTAAGAAGAATTATCATCCATTaccaataaaaagaaa
aactacaaaaacactatcttttgaaaaaattgtggaaacgctaaaagaaa
aaGACCTAATGAAGGACACCACACTCTCAACAGCAGCTCCTCAACCTGAG
ATAGACTTTGTTGTTGAATCTGTAAGAAAACCAGATCACGTTTCAGATTT
ACCATGTATTGATGATGTTATTGTTGTTGAATCTGTAAGAAAACCAGATC
ACGTTTCAAATTTACCATGTATTGATGATGTTATTTTAACCTCGAAATCG
ACAGATGAATTTCTGACAAATGTTACCAATGATTTGACCAATGATATTAT
TGATAAAATTGAGGTAGCTACTAAAGGACAGAGTACCAATGAACTATGGT
ATCAACATAGAAAAAGTGTCATAACTGCTTCTAAAGTGCATGAAGTGAAA
ACTAAAATGGAGACTATAAAAGGATATCAGAAAGGGGATGAACGAAGTGA
AGTTTTAATGTGGAGTTTAACGaaaaaaaTAGCTGGGTTTACTTTCTTAA
ACCCAAATAATCCTGCGTTGAAATATGGTAGAGAAATGGAGGGAATGGCA
TCTTCAAAActtcttgattttctaaaaactaAACATAAAGGAGCCAAAAT
CAGAGACTGTGGTTTGCTTCTTCACAAGAATAAACCTTTTATTGGAGCTA
GTCCTGATGGCATATTTTCATGTGATTGCTGTAAGGAGGAAGTGTGTATC
GAAATCAAATGTCCGTATTCAATAAGCTACCTTTCCCCGACTGATGAAAA
TGCAAAGCTTCGTTACATGATAAAAACTGACCAAGGACTGAGATTGAGAG
AATCTCATCAATATTTCAGCCAGTGTCAATTTCAAATGGGTGTGTGgaac
ttgaaaaaatgtttctttttcgtTTATACTGCCCATGGTTTTATATTAAA
TGAAATTAGATttgataccaattttttttctgagttGTCAGAAAAGTGTA
GTAATTTTTATAAAGAATATTATTTACCATCAATTTTCTTAGCTTGAATG
GATTACAacactgtgaaaaaaatgaaagttaatgagctgaaaagttttct
CAGACTTCGAGACATGAGACTTTCTGGGAATAAAGAAAACCTCAGAGCTA
GAGTGTTGGTTGCAATTGAAAATGGGGTGAAGCCTGTAAAAACTGCAGAG
GAAATTGAAGGAGAACTGCTCAGAGAATATAATGATAAACTGACATGCAA
AGGTATCTCAATCCCCGATCCATTCAATCTTCAAGATGGTTGGAAACCTG
AAGCAATTGGAGTCAAGGAGTGGCCAATGATATCAACATTATATATCATA
AAATTTCTTATGTTGGATGAAACCATCGGAGACTTGAATGACTACAAGAA
GTCTAAAGCATATAGCTATTTCGAGAGAGGATGGCTTGGAAAGATAGACT
TTCATCCCTTGAAAGACACACCATTTTGTCTGATGAGAACTGATTGCCGT
CCATCACAGAGAATATCAGACACTCTTCATAAACTTTGGCTGCTTTTTTC
AAAGGACACAGGAAATGTGCTTGAAGCCCACTGTACATGTATGGCAGGTA
TGGGTTCTTCCTGTAATCATGTTGCTGCTGCCTTGTTTCGCATTGAGGCA
GCTATGCGTTATGGTTTGTCAAATCCGTCATCAACATCTCTACCAAACGA
ATGGCTACCTAATCGTAATGAGGTACAACCATCTAAAGCAAAGAATATTG
ATTTTAATAGGGATGATTTTGCTAAGCGAGGCAAGTCGAGAAAGAAGCTT
TTTAGTACCCCTAAGAAGAATTATCATCCATTaccaataaaaagaaaaac
tacaaaaacactatcttttgaaaaaattgtggaaacgctaaaagaaaaaG
ACCTAATGAAGGACACCACACTCTCAACAGCAGCTCCTCAACCTGAGATA
GACTTTGTTGTTGAATCTGTAAGAAAACCAGATCACGTTTCAGATTTACC
ATGTATTGATGATGTTATTGTTGTTGAATCTGTAAGAAAACCAGATCACG
TTTCAAATTTACCATGTATTGATGATGTTATTTTAACCTCGAAATCGACA
GATGAATTTCTGACAAATGTTACCAATGATTTGACCAATGATATTATTGA
TAAAATTGAGGTAGCTACTAAAGGACAGAGTACCAATGAACTATGGTATC
AACATAGAAAAAGTGTCATAACTGCTTCTAAAGTGCATGAAGTGAAAACT
AAAATGGAGACTATAAAAGGATATCAGAAAGGGGATGAACGAAGTGAAGT
TTTAATGTGGAGTTTAACGaaaaaaaTAGCTGGGTTTACTTTCTTAAACC
CAAATAATCCTGCGTTGAAATATGGTAGAGAAATGGAGGGAATGGCATCT
TCAAAActtcttgattttctaaaaactaAACATAAAGGAGCCAAAATCAG
AGACTGTGGTTTGCTTCTTCACAAGAATAAACCTTTTATTGGAGCTAGTC
CTGATGGCATATTTTCATGTGATTGCTGTAAGGAGGAAGTGTGTATCGAA
ATCAAATGTCCGTATTCAATAAGCTACCTTTCCCCGACTGATGAAAATGC
AAAGCTTCGTTACATGATAAAAACTGACCAAGGACTGAGATTGAGAGAAT
CTCATCAATATTTCAGCCAGTGTCAATTTCAAATGGGTGTGTGgaacttg
aaaaaatgtttctttttcgtTTATACTGCCCATGGTTTTATATTAAATGA
AATTAGATttgataccaattttttttctgagttGTCAGAAAAGTGTAGTA
ATTTTTATAAAGAATATTATTTACCATCAATTTTCTTAGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097_pilon | genome | sc0000097_pilon:205629..207425 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1797:1 |
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