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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000524_pilon:65374..67762- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038688 ID=XLOC_038688|Name=XLOC_038688|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2389bp|location=Sequence derived from alignment at sc0000524_pilon:65374..67762- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGGTAGGATGACGTTCAACCCTCCTCTTAGTCAAAAACCAATGAC
GTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACCG
AGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTATG
AAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATGG
TAAGATTTTTGTAATCCATAATAAGTGTTTATTAATACCTTACGGGGAAC
ACATTTAGGCGAGAAATAATTTTAGCGAGCAGCAAATTTTTTATTACTTT
GACGGCGCACTTTATTCTTTTAGTTTTGGTGGAAGCTATTTTCGCATTTG
GATTGTAGGGTGATTTTATTGTGAAAAAGAAACTATGTAACTGATTTGAA
ATCGTGTTGCAGGGTGGTTTGCATCTAGCAATTAAATTAAATTTAAATCT
TTAGGTGGATTTATTTTCTCAATTTGGGACGGTGATCGAACATATCGACT
TTCAAATGGAAAGAAACAAGTCAAGAAATCCACCAAATTGGTTTGGCCCA
TGGATTTAAGAAACTGCAAGCGGAACTGTCAAGATTGTGAACTACCTTCA
TTACGGGATATTGCCAAACGAGGTTTTACGACTGGTACTAAATGTATAAC
AAAATATCCAATGAAGGTATTTGTCCCTCTTCTAAATTAAGATAATCCTA
TGGATCAGACTCAGGGCCAACGTCATGAAATTGTTAGAGCAATGAATATA
GAGTCTAAGGAGGCGCAACCAAAGAATTTTACTTTGCAAAAAAGTGAGGG
ATAATGCTCCCCTGGCCCGGTGGACCCTGAGACTAGTGAAGTGGTCTAAT
TATTGCTTCGCTAAAGCGACAGTTGCCTAAGGTAGCCTTTGTCATTTGAC
CCTATATACGGTGAACGGCTTGTGACCAGAGTCAAGTCAACCCTTATTAT
CTGATTTCGGTCGGTAAATAGGTACGATATACTCAAACTTAATGGGTCAA
TTGCAGGTCTTCGACAACCAGGGTGTGCTGCGTCTGGTACACCATCACAT
ACCGTGGGGTAAGACTTACTATAAGTCCTACCTCCGAGGTATTTAGTCCA
GCCAAAGTAACTGACACTACACTAGTAAGATGGGTTAAAATATTTTGATT
AGAATAGAAAGTTGGAAAAATCAGTTTGGATATTGGAAAAAATTGCAAAA
CGTACGTACATTTTCCTGATGGAACCCCACCCCGCCACCAAGCTTTCGTA
CGCTTTTCGAACGATCCCCCCTCAGGGTGTATGTACTTTTTGAATGGTCC
CTAAACACACAGTACTTCTCGAAGTGACCATGAAACTATTCCCATTCGTA
CCTTTACTTAAGCATTTCTTAAATTTGAGCTTGTTGATCAAAATTGAGTC
TCATCCAGCATCCAACTGCTTGGAGCAATAAAACTTTTCAATCATCAACT
TTCAGGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGTACCGAGA
AAACAAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTCATGAAGA
AGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTTTGTAGTAGTCTAGCC
TCGTTCCTGCCTAAAACAGGCTTTTCACGTTATTTGTGAAAGCCAGAGCA
AGGTCTCTACGAATTTGTTTTCAGCATTTTCAAGGTTTTCAAGTTTTTGG
GTCATTTTAAAGCTGTTTTTCAAGGCTTTTTGGCAAAAATTTTAGTACTT
TTCAAGGTCTCGTAGACACCATGCAGAGATTGAAATGTAACATTTTATTT
TTGGATTAAGTAATCGTACATGGTCTAAAGCCGGATGATGACCTTTCCCG
GATATAGGTGTGAAAGATATGCAGTATTGAAAAAATTGTGAAAATTTGCC
ATGGCAATGGCGTATATTGAAATGTTCACGGTATATTTTAGTGTATATAC
ATACAAAAAAGAGAATCGTGGATTAAAGTCGGTGCGTAAAAGGATGATTA
TTTTTACATTATGTCATTATTTTTCAGGTTCTGTCTGGCAAGTTAGTGTC
ACAATCAAGAAGGGCGCTACACCAGGTAAAATTATTCCGGTCGGAACAAT
CATGTTCGAATCGGACGAAATCGGATTCAACCGTCTTGGAACATTCGACG
AAATGATTGGCTGTAACAAATGTAACGCTATTTATCACAAAGACACGCGA
TATGGACCTATAGTTAGCACAGAGGGGCGGTATAAAAGACGCCCTGTTCA
CATGGAAGCATGGACACGCTATAACGAATCCACATGCAAAAAGTATCAAA
TTTCCGGATCGAAACGAGACTGTAGCCTCTCTTTCGAAAGTGGCCCATTG
ACTAAAGGCGTCACAAAATCAAGAATTAAGCTTTGGTAA Coding sequence (CDS) from alignment at sc0000524_pilon:65374..67762- >XLOC_038688 ID=XLOC_038688|Name=XLOC_038688|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1800bp|location=Sequence derived from alignment at sc0000524_pilon:65374..67762- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGGTAGGATGACGTTCAACCCTCCTCTTAGTCAAAAACCAATGAC
GTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACCG
AGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTATG
AAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATGA
TGTATGGTAGGATGACGTTCAACCCTCCTCTTAGTCAAAAACCAATGACG
TCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACCGA
GAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTATGA
AAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATGGT
GGATTTATTTTCTCAATTTGGGACGGTGATCGAACATATCGACTTTCAAA
TGGAAAGAAACAAGTCAAGAAATCCACCAAATTGGTTTGGCCCATGGATT
TAAGAAACTGCAAGCGGAACTGTCAAGATTGTGAACTACCTTCATTACGG
GATATTGCCAAACGAGGTTTTACGACTGGTACTAAATGTATAACAAAATA
TCCAATGAAGGTGGATTTATTTTCTCAATTTGGGACGGTGATCGAACATA
TCGACTTTCAAATGGAAAGAAACAAGTCAAGAAATCCACCAAATTGGTTT
GGCCCATGGATTTAAGAAACTGCAAGCGGAACTGTCAAGATTGTGAACTA
CCTTCATTACGGGATATTGCCAAACGAGGTTTTACGACTGGTACTAAATG
TATAACAAAATATCCAATGAAGGTTGGTGATCGCTATACAGTCAAGCTAT
CAAAAGCTGTACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTT
AGAAAAGTTCATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGG
TTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGTACCGAGAAAACAA
ATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTCATGAAGAAGTTTT
AGGAGAGAAAAACCGTTTCATCAAAGGTTCTGTCTGGCAAGTTAGTGTCA
CAATCAAGAAGGGCGCTACACCAGGTAAAATTATTCCGGTCGGAACAATC
ATGTTCGAATCGGACGAAATCGGATTCAACCGTCTTGGAACATTCGACGA
AATGATTGGCTGTAACAAATGTAACGCTATTTATCACAAAGACACGCGAT
ATGGACCTATAGTTAGCACAGAGGGGCGGTATAAAAGACGCCCTGTTCAC
ATGGAAGCATGGACACGCTATAACGAATCCACATGCAAAAAGTATCAAAT
TTCCGGATCGAAACGAGACTGTAGCCTCTCTTTCGAAAGTGGCCCATTGA
CTAAAGGCGTCACAAAATCAAGAATTAAGCTTTGGTAAGTTCTGTCTGGC
AAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGTAAAATTATTCCG
GTCGGAACAATCATGTTCGAATCGGACGAAATCGGATTCAACCGTCTTGG
AACATTCGACGAAATGATTGGCTGTAACAAATGTAACGCTATTTATCACA
AAGACACGCGATATGGACCTATAGTTAGCACAGAGGGGCGGTATAAAAGA
CGCCCTGTTCACATGGAAGCATGGACACGCTATAACGAATCCACATGCAA
AAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCCTCTCTTTCGAAA
GTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATTAAGCTTTGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000524_pilon | genome | sc0000524_pilon:65374..67762 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 541-900:361 |
| Aaloc | 412-537:935 |
| Aaloc | 202-411:1934 |
| Aaloc | 1-198:2390 |
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