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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:160553..164252+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038687 ID=XLOC_038687|Name=XLOC_038687|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3700bp|location=Sequence derived from alignment at sc0000006_pilon:160553..164252+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATATTATTTCTATCTTCTCTTAGAACCCATTCGTAACCACACAAC
AGGTGGTCTTTTGTGTGAGCAAGAAAATCCCGATGACCCATGTCCAGATG
AAATTGGACAAAAGATCGTACCAATTTACATGGCAATTTACATGTTGATG
ACGAATATATTATTGTTGAATCTGCTCATTGCCATTTTCAAGTAAGTTGT
ATGTTTGAAATATTCGCAAACAAAAGTTCCAATATGTATTATCATGAAAA
CTTTACAACACGACTTTGGGGTTTAGAACAATTTAATCTCGAGAAATAAC
Acgtttattataagaaaattttttagaataaattgttttttttttattct
aactTTCTCCATTTTTCGAGTATCTCAGtccatttttgtaaaataatcag
gtgttttagagacAATAAATGTTCTCCTTAAcgtgttcttaatattttgt
tcatagaagcaataaaatcttttaaagtttgttcttataagaggAACCAG
TACTCAACTGCTTGAGGACGCAATACaaaaaaaCTTATCATTTATAAGAC
GTCTTATTCTTTTTAGCCGCAAATCTAAAAAAGATATACTATACTCAAAT
TTGTGTGCCCTCTTTAAACTTAATTTGAGGCCGATTTCGAGTTTGGTTCT
CTTACGCATTCCAGTTACTCGTGTGTCCATTTCATCAAACTCTCTTCTTG
AGATATTATGTCTTTCAATTATTGCTCCAATGATGAATCTTTACCAACAA
ACTCTAtaggctgcttgcatcctcTAACGAAATGAACACTtacggttttg
tagaggtctgcgattcagactacaaaCTCCACTTTTAATCAAATAGCTCG
ACATTTTGCTCGATGTTTCTTTATTTCATATTTGCCTCATCGGtgacttt
tcttttcttttcttttctagtaACACTTACGAAAAGGTGCAAGAGAATTC
GGATCGTTTGTGGAAGTTTAAACGTTATGATGTCATAAGTGAATACAATG
ACCGCCCATCATTTTGTCCGCCCTTCATTGTGTTGGCTCATATTTGGTTT
TTCGGATTGTTCTTGTTCCGATGTTGTTGTAAAGGAACAAGACAAACCAA
ATTTGGAACGCTCAGTAAGCTGTTTCTTTACTTCTCCTTCTTTTGTAATA
AGTGCATTCTTATCAGTTAAATTAAAGACCTAAAGAATAAGGTAgtaaat
ttttatctttattgctttacagactaaatttggtagtttttccaagtttt
tgagaaatttacgttcaatttttaattttatccagtttaatccactaatt
tgaactttttctttttgtgtctttttatttctattttgcatttttgtgaa
gacgtagtagtttttgctgcctttttaggagttttttttgcttaaattct
ACTTATTTTTTCACCGAACGACCGATCCTCTCTTTTCTCAACTTCATTTG
AGCTACAATTtgacaatgtctgtgtgtctgtctgtctgtcacaaaaactt
tagggcagcctggagacttcaaaaatgcttggatttggctgaaatttggc
acacttgttacttgggtgaatatctgggggctatttttcatttttcaaaa
attttgattttttgggcctggggacgagttatTCGCCAAAAAGAGGCTAT
AACTTTGGCGCAGCCTGGAGActttggctgaaatttgtcacacttgttcc
ttgtgtgaatatctgggggtgttttttttttcattttttgaaaattttga
tttttgcggCCTGGGgatgagtttttcgccaaaacgaggccaaaactttg
gggcagtctggagacttcaaaaattgtttgatttggctgaagttttgcac
acttgttccttgggtgaatatctgggggtctacaatcgGGCCTATAGTTT
GAAGGCACTAAAGTTGAGCCCAGTGTGTTGCGCACGTTTGACTATTGTAT
AGCTtgacccgtaaaacaacaaattaaattggcctcgtcTTAGATTGGCG
AAGAAAATTCGGCTAACTAAGGGGGGATTTTTCGGGAACACGCTTACAGG
CATATTTTTACattaggaagaaattttggcgaaaagtACTTATATATTTT
GGTTTTTCGTTGAAATTCGCCTTCGCTTGAGTGTTCATTTCATCTAAAAA
TGCAATCGCCCCTCTTTGTAACAGCTGTGGTCattcaagaaaatgaaaac
tggAGGAggggggggCTCCCTTGATGAGGCCCCCCAaacggaccctcaat
tcacgaaatcatgcaattttttttcgaaattcacgcattcacacaataac
ccgatttttcagaaatcggaaaattttaataatcggtggaaaaaaggaaa
aattcacatATTCACGCACAAGATAACCCAGATTCACGGTCACGctttca
cgcaatcaaaaagtgcattttcacgttcactcaagttttttcaattcacg
cattcacgcatttttttttcaattttcacgcattcacgcaaccgataatg
cccattcacgcaatcacgcaaaccgctgggggggcctcttgaTTTCTGCT
GATCCTTCTGAATAATAACGAAATTCGTTGCCAAAAATTCCTCTgaaatt
taattgttttttcgcatTTTAATCGAATTTCGCCACACGTTCGAAAAAAG
GTTTTGCCGAATTCAGATTTACCAAAACTGATTTTGTCAAATGGTATCGA
AATAGGCGAGTTGGCTTATTTACCAattttttgattctctttgagcattt
tcattttttgagaataAATCCATTCGAAGCTTATGTAACTTTAGAATAAG
GTAATCTATTTAAAGGtgttgtttttacataagtgttcccgtttcatatc
agtcacatatttcatatcagaacagtgatattgttatattatgataatat
acagggctcgaaataacgatatttaggtggtcggacacactgtccgatca
aaaattgatttggttcggacatgtcctaaggcttttaaagtaaaatgggt
cggacatgtccgattgatttttatgtggggTATACTTCATGTCTAATACA
AGCTTCTGATAGAATTTTACATTGAtcacgaagaagctaaacaaatgtca
attaatggtcagaagcccatgatttttacttgaagcatgctttcatttgt
tgagaaaaagcatcacacaaaatgaatatctaacactaatgatcgcaact
ttgagagtttttgtgtgtaaataaagaagttactaattctatgtaaatta
caatttcttctgaaaatttcacaacgcatctgacaaatttttcgaAGGCA
CCAAaagtaattgggtcggacatgatgtccgactagaatcgatttgggtc
ggacatttcagcaattgggtcggacaatgtccgatgtccgaccgttattt
cgagccctgaatATAaccataaaataatttttctttctctctgaCTAATC
TttctccacatccgtgtcaattgaatgtgaaaaagcttgtgagtTAGATt
tgatgaataagcaaacgatatcacccttatttaaaagtaaaacctttaag
ttaATCACTTCCCTTTTCTTTTCAGATAAATCGTTTTACGTGGACGAGAT
CATTTTGTTACGTAAATGGGAGAAGAGCAGGATGGAGGCTTACAATTATT
TACACGAGAAACGTGAAGCAGATACGCAAGACAAACGTGTCAAGTCTATT
Coding sequence (CDS) from alignment at sc0000006_pilon:160553..164252+ >XLOC_038687 ID=XLOC_038687|Name=XLOC_038687|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1020bp|location=Sequence derived from alignment at sc0000006_pilon:160553..164252+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATATTATTTCTATCTTCTCTTAGAACCCATTCGTAACCACACAAC
AGGTGGTCTTTTGTGTGAGCAAGAAAATCCCGATGACCCATGTCCAGATG
AAATTGGACAAAAGATCGTACCAATTTACATGGCAATTTACATGTTGATG
ACGAATATATTATTGTTGAATCTGCTCATTGCCATTTTCAAATGTCATAT
TATTTCTATCTTCTCTTAGAACCCATTCGTAACCACACAACAGGTGGTCT
TTTGTGTGAGCAAGAAAATCCCGATGACCCATGTCCAGATGAAATTGGAC
AAAAGATCGTACCAATTTACATGGCAATTTACATGTTGATGACGAATATA
TTATTGTTGAATCTGCTCATTGCCATTTTCAAtaACACTTACGAAAAGGT
GCAAGAGAATTCGGATCGTTTGTGGAAGTTTAAACGTTATGATGTCATAA
GTGAATACAATGACCGCCCATCATTTTGTCCGCCCTTCATTGTGTTGGCT
CATATTTGGTTTTTCGGATTGTTCTTGTTCCGATGTTGTTGTAAAGGAAC
AAGACAAACCAAATTTGGAACGCTCAtaACACTTACGAAAAGGTGCAAGA
GAATTCGGATCGTTTGTGGAAGTTTAAACGTTATGATGTCATAAGTGAAT
ACAATGACCGCCCATCATTTTGTCCGCCCTTCATTGTGTTGGCTCATATT
TGGTTTTTCGGATTGTTCTTGTTCCGATGTTGTTGTAAAGGAACAAGACA
AACCAAATTTGGAACGCTCAATAAATCGTTTTACGTGGACGAGATCATTT
TGTTACGTAAATGGGAGAAGAGCAGGATGGAGGCTTACAATTATTTACAC
GAGAAACGTGAAGCAGATACGCAAGACAAACGTGTCAAGTCTATTATAAA
TCGTTTTACGTGGACGAGATCATTTTGTTACGTAAATGGGAGAAGAGCAG
GATGGAGGCTTACAATTATTTACACGAGAAACGTGAAGCAGATACGCAAG
ACAAACGTGTCAAGTCTATT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:160553..164252 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 388-510:3578 |
| Aaloc | 193-384:922 |
| Aaloc | 1-189:1 |
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