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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000115_pilon:573335..575262+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038653 ID=XLOC_038653|Name=XLOC_038653|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1928bp|location=Sequence derived from alignment at sc0000115_pilon:573335..575262+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaacaaaaaagcaacTGAATACACAGAGTGGGAGACTTAACAACAA
AAGAACAACAGCCAACACGAAACCTCCGCAACAATCAAAATATAGTTTCC
GGGAACGTGCGATTGTTATTGAATCATCCACAGAAAACGAATCGAGTGAT
GGTGAAACTGTAGACTCAGAAATCGAGAGTAACAAAAAACACAGTggaga
aaacgaaaaaaacccACAAATCTCAGGTGATGAGACTGAGAGTCTTTCAG
AATCAGATGTTGAGTCTCTGCCTCACAAGTCAACAAAAACACGTCAATCT
CCAAGGAAATCACCTAGAAAACAACCTCCAGTAATAGATGACGACAACCC
ACAAACTTCAGGTGATGAGACTGAGAGTCCTTCAGAATCAGAAGTCGATT
CTCCGCctcaaaaaaacacaaaaaaacgtCAATCTCTGAGGAAATCACCT
AGAAAACAACCTCCAGTAATAGATGATGAAGATTCTGACATCATCTCATC
CAAATCTCGAAGATCCACTAATAGGACGCTTAGATCAGGGATGGAATGCA
TAGAGGATAGTCCACAGAGTTCACCCAATTCCGCTGCAGATTCGGCTTCG
CCAAAGCTATTTTCACCAGCTGATCCAGAATCCCCTGGAAGTCAAAATTC
GTCAGTATCGTCCTTTGATGAGTCAAGATTAAGGAATGAAACCTCTAACC
ATGCTGAGTAAGCATTGTGTTTCTCTCTCTAAACCAATTAAAGAGTCTGG
TCTTTCAAAAGTTAAtagtgttttgattttcttttgtcatttattGTTGG
GATCTACCATCACTAGGATGATTTTGGTTGTGGCGTTTTATATGcctgaa
aaatagtttgatatgatatgattgatttcttttttctatcttTGTACAAT
CAGATCGATTCACTTTGATTTCACGCCAATTATGAACGTTGACAAGCTTC
CTACAACGAATGTCGAAAAACAACCTCCAAATACTGTTCCTTATGGCCAT
GGTAACTATCATACGAATTTAGATTGGTATTCGTTtaacaatttgaaaat
ttttgggaATGACTGAATGTGAATGTTTTTGGATGGTGCTTGGAATAAAC
TCACATCACtttttttCAGATATAATATCAATCAAAAGTTTTGAGTCCGA
CAAGctcaatttaaaatttccatCATAATTTTCCCTACACTCCAGGTGCA
CCAATTGAAGCTTGTAAGATAAAAGATCACTTATCCATTTATTATAACGA
ACGTGGCATATGTGATGAATTCGCCAAGAGAGAAAACCTACAAATTccac
aaatgaaaatattatggAATAGCTACCTTGAGTTTATGACCATCAAAATA
ATAGGCTGCGATACCGGGCTCGATGGACTGATACGATACTCAACTTGCAC
TGAAATGCATAAACTATGGCACGCACATGTTTTGAACACACATAATTACA
GAACATTCATGGCATTAATCAATAACATTAATCCTTTAATCGAATATTTG
GACCCTTCTATTGAGCACGCCAATTCTACTGAAGAAACCAAGAAGAGACA
AATCCAGAATACGAAAGAAGCTTACAGGTATTGAGTCATTTTGTTCGCAA
TTTTTGCAGGTTTTGTTAAGTCCGGGATTGtttttttATCTGCTTTTACT
CTTTTCATTTCCATTGGACGAAAATTACTCAATAATTTCCCTGTTAAGCT
GGCTGGAATGTGTCATGTTTAAGTAGCTTATACTATGTCCTTCTGAGTTT
ATGACACCAAACACATTTATATATCCATGTTTTGTTCATCAGGAAACTAT
TCAAGAAAGAATGTCCGTGGTTGTCTTCCACACAAGAGGATGATGAAATT
CCAACAATAGAAGTATCGGTACCCAATACACCAAACACTACAAATGATCG
ACCAAGTACAATAGATAAAAACTCCAAT Coding sequence (CDS) from alignment at sc0000115_pilon:573335..575262+ >XLOC_038653 ID=XLOC_038653|Name=XLOC_038653|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2646bp|location=Sequence derived from alignment at sc0000115_pilon:573335..575262+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaacaaaaaagcaacTGAATACACAGAGTGGGAGACTTAACAACAA
AAGAACAACAGCCAACACGAAACCTCCGCAACAATCAAAATATAGTTTCC
GGGAACGTGCGATTGTTATTGAATCATCCACAGAAAACGAATCGAGTGAT
GGTGAAACTGTAGACTCAGAAATCGAGAGTAACAAAAAACACAGTggaga
aaacgaaaaaaacccACAAATCTCAGGTGATGAGACTGAGAGTCTTTCAG
AATCAGATGTTGAGTCTCTGCCTCACAAGTCAACAAAAACACGTCAATCT
CCAAGGAAATCACCTAGAAAACAACCTCCAGTAATAGATGACGACAACCC
ACAAACTTCAGGTGATGAGACTGAGAGTCCTTCAGAATCAGAAGTCGATT
CTCCGCctcaaaaaaacacaaaaaaacgtCAATCTCTGAGGAAATCACCT
AGAAAACAACCTCCAGTAATAGATGATGAAGATTCTGACATCATCTCATC
CAAATCTCGAAGATCCACTAATAGGACGCTTAGATCAGGGATGGAATGCA
TAGAGGATAGTCCACAGAGTTCACCCAATTCCGCTGCAGATTCGGCTTCG
CCAAAGCTATTTTCACCAGCTGATCCAGAATCCCCTGGAAGTCAAAATTC
GTCAGTATCGTCCTTTGATGAGTCAAGATTAAGGAATGAAACCTCTAACC
ATGCTGAatgaaaacaaaaaagcaacTGAATACACAGAGTGGGAGACTTA
ACAACAAAAGAACAACAGCCAACACGAAACCTCCGCAACAATCAAAATAT
AGTTTCCGGGAACGTGCGATTGTTATTGAATCATCCACAGAAAACGAATC
GAGTGATGGTGAAACTGTAGACTCAGAAATCGAGAGTAACAAAAAACACA
GTggagaaaacgaaaaaaacccACAAATCTCAGGTGATGAGACTGAGAGT
CTTTCAGAATCAGATGTTGAGTCTCTGCCTCACAAGTCAACAAAAACACG
TCAATCTCCAAGGAAATCACCTAGAAAACAACCTCCAGTAATAGATGACG
ACAACCCACAAACTTCAGGTGATGAGACTGAGAGTCCTTCAGAATCAGAA
GTCGATTCTCCGCctcaaaaaaacacaaaaaaacgtCAATCTCTGAGGAA
ATCACCTAGAAAACAACCTCCAGTAATAGATGATGAAGATTCTGACATCA
TCTCATCCAAATCTCGAAGATCCACTAATAGGACGCTTAGATCAGGGATG
GAATGCATAGAGGATAGTCCACAGAGTTCACCCAATTCCGCTGCAGATTC
GGCTTCGCCAAAGCTATTTTCACCAGCTGATCCAGAATCCCCTGGAAGTC
AAAATTCGTCAGTATCGTCCTTTGATGAGTCAAGATTAAGGAATGAAACC
TCTAACCATGCTGAATCGATTCACTTTGATTTCACGCCAATTATGAACGT
TGACAAGCTTCCTACAACGAATGTCGAAAAACAACCTCCAAATACTGTTC
CTTATGGCCATGATCGATTCACTTTGATTTCACGCCAATTATGAACGTTG
ACAAGCTTCCTACAACGAATGTCGAAAAACAACCTCCAAATACTGTTCCT
TATGGCCATGGTGCACCAATTGAAGCTTGTAAGATAAAAGATCACTTATC
CATTTATTATAACGAACGTGGCATATGTGATGAATTCGCCAAGAGAGAAA
ACCTACAAATTccacaaatgaaaatattatggAATAGCTACCTTGAGTTT
ATGACCATCAAAATAATAGGCTGCGATACCGGGCTCGATGGACTGATACG
ATACTCAACTTGCACTGAAATGCATAAACTATGGCACGCACATGTTTTGA
ACACACATAATTACAGAACATTCATGGCATTAATCAATAACATTAATCCT
TTAATCGAATATTTGGACCCTTCTATTGAGCACGCCAATTCTACTGAAGA
AACCAAGAAGAGACAAATCCAGAATACGAAAGAAGCTTACAGGTGCACCA
ATTGAAGCTTGTAAGATAAAAGATCACTTATCCATTTATTATAACGAACG
TGGCATATGTGATGAATTCGCCAAGAGAGAAAACCTACAAATTccacaaa
tgaaaatattatggAATAGCTACCTTGAGTTTATGACCATCAAAATAATA
GGCTGCGATACCGGGCTCGATGGACTGATACGATACTCAACTTGCACTGA
AATGCATAAACTATGGCACGCACATGTTTTGAACACACATAATTACAGAA
CATTCATGGCATTAATCAATAACATTAATCCTTTAATCGAATATTTGGAC
CCTTCTATTGAGCACGCCAATTCTACTGAAGAAACCAAGAAGAGACAAAT
CCAGAATACGAAAGAAGCTTACAGGAAACTATTCAAGAAAGAATGTCCGT
GGTTGTCTTCCACACAAGAGGATGATGAAATTCCAACAATAGAAGTATCG
GTACCCAATACACCAAACACTACAAATGATCGACCAAGTACAATAGATAA
AAACTCCAATGAAACTATTCAAGAAAGAATGTCCGTGGTTGTCTTCCACA
CAAGAGGATGATGAAATTCCAACAATAGAAGTATCGGTACCCAATACACC
AAACACTACAAATGATCGACCAAGTACAATAGATAAAAACTCCAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000115_pilon | genome | sc0000115_pilon:573335..575262 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1189-1323:1794 |
| Aaloc | 808-1185:1198 |
| Aaloc | 709-804:905 |
| Aaloc | 1-705:1 |
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