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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:2061630..2068027- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038465 ID=XLOC_038465|Name=XLOC_038465|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6398bp|location=Sequence derived from alignment at sc0000007_pilon:2061630..2068027- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGATGTATTGCAGAAATCATCTATCACGGTTAAAACTGTCAAATAA
AGTAATAATTTCTTCATCTCAATGCGGATGTTCCACTCAAGTCTCCCCAT
CTTTAAAGAAGAAACGAAAACTAATATACGCTAAGGGTTGGTATTTATGA
TGTAGTTTATTTTCTCTTGTCTAAATAATAACTGTAAGTTGATCTAATAT
CGACATCCCTCCTCTAATTCCGACAATCTTCTTTAGAGACAGGAATAATA
TGAAAGCTTAAATCACTGATTGAAAAAGGATTATTCCTCTCTGACCACTA
AGCAAAGAAAAACAGTTTCAACCTTTCTATCAATTTCAGGTGATAAAAAG
GGTGTTGGAATTAGAGGAGGGGTGTCGACATTAGACTAAGTTACGGAAGT
ATATAAGCTACTTTATTGTATATCCTGTGATTGACTTGACCTTGGTTTGA
AAACTATAATGAGAATGAAACCTTTCCTTAATCCTAATTGTTTGATCACA
AATTCCATTGCATTTTTCATTTTGCCAGGTAAAACATTTGTAGATTGGAA
GCGTATCTATATCAAGTCGGGTAATGGTGGGAATGGTTCAGCCTCATTTG
TTCACTCAAGGTATGTATAACGTATTCCTATTTGAATCAAGACATTCTTA
TATAGATTTACACAAAAACAATAACATATCATATAAAAGATGTGCATTAG
AAAGGTGTCATCAGCGTTTTTTGGAGCTCTTTGTTTAAAAAGCTAAATAG
GTTGTTCCGGCGATTTTGAATAGTTCTGGTTTCAAAAATCATTATTTTTC
AAAATTGAAACATGCTTGATCGTGGGCATTGCTATTAATAATGTTTTTAA
ATGAAAAAACAACCAATTATAAGAAAAAAATCCAATGAAAATCAAGAAAA
ACGGAGATTTCCGGCATATTTCCGGCATATTCGGCCGGAAAAAATTTTTT
CTCAAAAATCGGACTTAGCCATGTTTTGGGCATTGTTAATAAGCATCTTT
GAGCAAAAAATCAGAAAAAACTAATGATGAAATCTTGAGAAAATGCCAAA
AAACAGCAAAAAAACAGTTTTTCCGGCATATTTCCGGCATTTTCGGCCGG
AAAAAAATGTTTTTCGAAAATCGGGCTCCGTCACATTTTAGGTGTTGTCA
TTTTGCATTAGTGTGCAAAATTTCATAAAAAAATATAAAGTGCAGCTTGA
GAAATTCAAGAAATACCATCTTTAGAGCTCAAAAAACACCAATGAGACCT
TTCTATGTGCACATCTTAGGAATAGTTCAATTCAAATAGGAATACGTTAT
ATAATTATTGGACCTACCCCGGTGGGCTGTAGGTCCTATAAATTAACCTC
TGTTCGTTCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTTACTAGCTTTT
CTCGGGATTGGCTCATTAGTTTTTCCTAATTTTTGGCACAAAGATGCAAA
ATGGTAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAATTCATT
TCCGGCCAAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTGGCATT
TTCTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCACAAAGATGCG
TATTAGCAATGCCTAAAAACATGGCCGAGTCCGATTTTTGAGAAAATTCT
ATTCGGCTGAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGCAGATTT
CATTGGACTTTTTCCTTATATTCGTTGTTTTTTCACACAAAACATTATTT
GTAGCAATGCCCACCACAAGCATGGTTTTAATTGTCGATAAAAGTGATTT
TGAAGCCGGAACTTTAAAAATCGCCGGAACAGCAATTTTCGCCGGAAAAA
CGGTATTTCTTGAATTCAGCTGTACTTTATATTTTTCATGAAATTTTTGC
ACACTGATGCAAAATGGCAATACCTAAAATATGACAGAGCCTGATTTTCA
ATTAACGTACTTTTCCGGCCGAAAATAAATGCCGGAAAACCGGTTTTTTT
CATTTTCTCGGATTTCTCATTTTTTTTGATTTTTTTGCACAAATGCGTAT
TAACAATGTCTAAAACATGGCCTAGTCCGATTTGAGAAAATTCTATTCCG
GCTGAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGCAGATTTTCAT
CGGACTTTTTCCTTATATTTCGTTGTTTTTTCACACAAAAACATTATTGA
TAGCAATGCCCACCATCAAGCATGGTTTAATTGTCAATAAAAGTGATTTT
TGAAGCCGGAACTTTCTAAAAATCGTCGGAAAAACGGTATTTCTTGAATT
TCTCGAGCTGTACTTTATATTTTTTCATGAAATTTTGCACACTGATGCAA
AATGACAATTCCTAAAATGTGACGGAGCCCGACTTTCGAAAAATATTTTT
TTCCCGGCCGAAATGCCAGAAATATGCCGGAAAAACCGGTTTTTTTTTTT
TTTTTCTCGAATTTCATCTTAGCTTTTTCTGATTTTGCAGAAAAGAAAGT
ATTTGCAATGCTCAAAACATGGCCGAGTTCGATTTTTGAGAAAAAATTTT
TTCCGGTTGAAAATGCCGGAAATCGCCGTCTTTGCAGATTTTCATTATAT
GTTTTCCTTTCCTTGTATTTCTATGTTCTTCACACAAAAACATTATTGAT
AACAATGCTCACCATCAAGCATGATTCAATTGTCAATAAAACTGATTTTT
GCGACCAGAACTTTCTATTAATTTTTCCCTACAACCCTTCCCTCTCCCCC
ATCAACAATCAATGATGAATTTATTGCGTTATGCATTTTCGCTAAACGAT
ATATTTTCTGACTGATTTTTTTCTCCTCGCATTGCTATCTAACTTTCATC
ATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTTTGTATTGAAACTTTTA
ATAAAACATATTCTCATTTTACTCTTAAAATAATTATGCTTTCTTGCAGT
TTCTTAAAAGAATTTTTTTTCAGTTGGTCCCTATGATTGTGATCTTTTTA
TTAAAACGAAATTCATTACTTCAAATGGCTCATTGAACAAATTTGTTTTT
TTCTTCATAAGGGACCATAAAGGGGGGCCAGACGGTGGTGACGGAGGACG
TGGGGCTGATGTCATTTTCATTGCTGATGATGCTTACTCCCAACTTTCTC
ATCTGGAGCATCAATACCGTGCTAAGAATGGAGGGAATGGTTCCAAGAAA
AACAGGCATGGAAAGAATGGAGAACATCTACATATACAGGTAAGTGTGTC
AATATATTTTCTTATTGTTTAAGTGGAATGTCCTTGTTTATGTTTTTGTG
TAGAAATAATTTTGAAACTGCCTAAAAGCTACTTGGAAAATTTTTGTGGT
CATGCTTCTCTAAATATTTAGTGTTAAAAGTTCTTCCGTCTCAGACTGAT
TTCCGTCTCAACGAAGTATATAGAGAGACTTTTCCGTCTCTAATACAGCA
TAATTGACCGAAATTTCAAGAATATGTGCTAATTTGCTGTGTAAAATCCA
TTTTCCGTCTCAGATGAAAGTCTTGCTTTGACCACTGAAATATAAACATT
GTTCGAGACATGTCCTGCACGTTTTTTTTATAAGGAACTTTAACTTGGCT
CCAAGTTTGGATTTCCTTATTTTTCCAGAGAATTTCAGCCTCAAAGTTCC
TTATCAGGGCTCTTATTTACTAAGCTGCCAAGTTTGGATTAATAGGTTAC
TTTGTTAAACAATGGACTACAATACGCGTTTTTCAACGTTGTTTTGTCAA
TATTTATAAACGTTTTGTTTAGATTTTTGTAAACGCCTACAAGTTCAAGT
TTATCTCTTTACTGTTCCTTAACTTATTTTCTTAGTCTCAGCCTCAGCAG
TTCCTTAACAATTCCTTATTTTTTGGACCATTTTCAGCCTCAAGTTCCCT
ATAAACGTGTTCCTTATAAAAAAAGATATGTACCGGGTGACCCACGAAAA
AGTTCAGACGTTTCCCGACGTCTTGAGGCCGAACAAATGTCCCAAAGTGC
TTGGAGTTTTGATATTTAGAAAGTAGATATCCTAACTTAAAATTTGAGCT
ATCACTTTTTAAATTTGACCAACTTGTTCTCTACTTATGAGCTTTTAAAG
TCAAAATTCACTTTTCGGAAAGTGTAAAAAACACGTAAAAAAGAGGTATT
AAATTTATGCAATCAATTAGAAAATCACTTACAAATGGACTTATTTAACG
AGTTTTATGACATTAATAATTAATAAAAACACCTTTAAAAGTAATTTTTG
TTTAAAACAAGACTAGTTTTTATAAAAATTGGCGCTTTTGTAGATTTTTC
AGATTTTTTTTCAAAGACTGTATATCAGAAACGTCTAAAAATACCAAAAT
TGATACCCCTTTTTTACGTGTTTTTTACACTTTCCGAAAAGTGAATTTTG
ACTTTAAAAGCTCATAAGTAGAGAACAAATTGGTCAAATTTAAAAAGTGA
TAGCTCAAATTTAAGTTAGGATATCTACTTTCTAAATATCTAAACTCCAA
GCAATTTAGGACATTTGTTCGGCCTCAAGACGTCGAGAAACGTCTGAACT
TTTTCGTGGGTCACCCGGTATGATTTTTTAAATCATGTGTGGCATATAGT
TTTTTTTTTTTTTAATTTAACTATTTTTATGTCCCTTTCAACTGATCCAG
TGACAACACTTTTTCATTTCTTTATACTATTTAAAACATCTTTACATTTC
AATTTTGGCTGCAGATCCCCGTGGGGACTGTCATTACAAACTCAAATAGT
GACGAAGAACTAGCAGATTTAACGAGAAAGGGAGAAACATACACTGTTGC
CAAAGGTGGATCTAAAGGTATGCTCATCTGCTACTTTGGAGCAAAATCGA
CTATAATTGCAAGGTCAATTTTCTTTCTTATTATGTTATTTCCATTGCAT
GACTTTGTAATAATTCTTCATTAATTTTAATTATCAATTAATATAAATTA
ATCATAATTTTTAATTTAAGGCTTAGGGGGTAATCCAGAAGAAAGCAAGT
TATTAATTAATCTTTTGTTATTCATTTTTCTTTACGAGATGATATAGCTG
TGAATGAAATAGTTGTTTTGCATTTTTGGTAACTTAAAGGTCTTGGTAAT
GTCCATTTCAAGTCACCTACAAGAGTGCGCCCAAGAGAGTTCACAGAGGG
AGGAACAGGAGAAGAAATATTTGTAGAGTTGGAACTGAAATCAATCGCTG
ATATTGGCTTGGTATGAGCATTTATTTGAATAGAGAATTAAAAATTACAC
CACTAGCCCCCTGTTGCAATGAAATTGCGCCAAAAATGATTTTTTTTGTC
CAATCTCTCAAAGGAATAATCTAAATAAGTTTGAGTTTATCGACCCAGTG
ATATTCATAATGGAAGTTTAATTGTAGCTTGGATCATGAGATTTACGTTT
GGCTACGTTTTAAAAGATTCTTCTCCCATCATCGGGAAATGTAGAGGATG
TTTTCTCCACTGTTTGTACTAAGACCTTCTGTACCCATAATTATCAAGTG
TAATTTCCTTGCAAGGTGTGGATCCCCATGTTATCATAGTTGTAAGGTAA
AATAGCTCTTGAACTTATGAGATTACTCATTACTGTGATTTCCATTTTGC
CTCTCTGTTCGGTTGGGAACCCAAATATTCTCTCAAAGGAACTGTGTTTG
TATTTATAGGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCTCCATTG
CATTTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAACATTGA
AACCAAACATCGGCGTGATGAATTTAAAAGATGACTTGACTGTTTCAGGT
TTTTATCTATTGCTTCCTTGTGTTAACACATTCCTGCCTATTACTTTTTA
GTAGCATTACCTGATATTCTAGGGATTTCATAATAATTTGCTTGATTTTG
GCCCTCAATTTCTGAATATATGGGGTTTCAAATAATTTTCATGACTTTTA
AAAGTGCATCATGTAAGTTAGAGATATTTTGTTCATGCTTACTCATTAAA
AAACCCAAATAATATTTATTTGTAACCGTTTAGTTGCTGATATTCCTGGC
ATAGTCAAGGGAGCCCACGAAAACATTGGTCTTGGACATGAGTTCTTACG
CCACGTAGAACGTTGCCATATGTTAATGTATGTTATGGACTGTTCGTCAC
CAGACATGCTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTAC
AAAGCTGGACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATCGA
TTTGATACAAGACCAGGATGAAATGAGAAATAACATACAACAACATGTAA
ACATGCCTGTTGTCCCACTCTCTGCTAAATTCAGTCAAAACATTGAAGAG
TTGAAAAGTCTTATATTTCAGAAATGGAAATTTAAGCATACTGGCTAA Coding sequence (CDS) from alignment at sc0000007_pilon:2061630..2068027- >XLOC_038465 ID=XLOC_038465|Name=XLOC_038465|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2250bp|location=Sequence derived from alignment at sc0000007_pilon:2061630..2068027- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGATGTATTGCAGAAATCATCTATCACGGTTAAAACTGTCAAATAA
AGTAATAATTTCTTCATCTCAATGCGGATGTTCCACTCAAGTCTCCCCAT
CTTTAAAGAAGAAACGAAAACTAATATACGCTAAGGATGCTGATGTATTG
CAGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTAATAATTTCTT
CATCTCAATGCGGATGTTCCACTCAAGTCTCCCCATCTTTAAAGAAGAAA
CGAAAACTAATATACGCTAAGGGTAAAACATTTGTAGATTGGAAGCGTAT
CTATATCAAGTCGGGTAATGGTGGGAATGGTTCAGCCTCATTTGTTCACT
CAAGGTAAAACATTTGTAGATTGGAAGCGTATCTATATCAAGTCGGGTAA
TGGTGGGAATGGTTCAGCCTCATTTGTTCACTCAAGGGACCATAAAGGGG
GGCCAGACGGTGGTGACGGAGGACGTGGGGCTGATGTCATTTTCATTGCT
GATGATGCTTACTCCCAACTTTCTCATCTGGAGCATCAATACCGTGCTAA
GAATGGAGGGAATGGTTCCAAGAAAAACAGGCATGGAAAGAATGGAGAAC
ATCTACATATACAGGGACCATAAAGGGGGGCCAGACGGTGGTGACGGAGG
ACGTGGGGCTGATGTCATTTTCATTGCTGATGATGCTTACTCCCAACTTT
CTCATCTGGAGCATCAATACCGTGCTAAGAATGGAGGGAATGGTTCCAAG
AAAAACAGGCATGGAAAGAATGGAGAACATCTACATATACAGATCCCCGT
GGGGACTGTCATTACAAACTCAAATAGTGACGAAGAACTAGCAGATTTAA
CGAGAAAGGGAGAAACATACACTGTTGCCAAAGGTGGATCTAAAGATCCC
CGTGGGGACTGTCATTACAAACTCAAATAGTGACGAAGAACTAGCAGATT
TAACGAGAAAGGGAGAAACATACACTGTTGCCAAAGGTGGATCTAAAGGT
CTTGGTAATGTCCATTTCAAGTCACCTACAAGAGTGCGCCCAAGAGAGTT
CACAGAGGGAGGAACAGGAGAAGAAATATTTGTAGAGTTGGAACTGAAAT
CAATCGCTGATATTGGCTTGGTCTTGGTAATGTCCATTTCAAGTCACCTA
CAAGAGTGCGCCCAAGAGAGTTCACAGAGGGAGGAACAGGAGAAGAAATA
TTTGTAGAGTTGGAACTGAAATCAATCGCTGATATTGGCTTGGTGGGCTT
TCCGAATGCTGGTAAATCTTCTCTCCTCCATTGCATTTCACGTGCAACAC
CAAAGATTGGAGATTACCCTTTCACAACATTGAAACCAAACATCGGCGTG
ATGAATTTAAAAGATGACTTGACTGTTTCAGGTGGGCTTTCCGAATGCTG
GTAAATCTTCTCTCCTCCATTGCATTTCACGTGCAACACCAAAGATTGGA
GATTACCCTTTCACAACATTGAAACCAAACATCGGCGTGATGAATTTAAA
AGATGACTTGACTGTTTCAGTTGCTGATATTCCTGGCATAGTCAAGGGAG
CCCACGAAAACATTGGTCTTGGACATGAGTTCTTACGCCACGTAGAACGT
TGCCATATGTTAATGTATGTTATGGACTGTTCGTCACCAGACATGCTTTC
CCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTGGACTGT
CAACAATATCATCCATCTTCATAGCGAATAAAATCGATTTGATACAAGAC
CAGGATGAAATGAGAAATAACATACAACAACATGTAAACATGCCTGTTGT
CCCACTCTCTGCTAAATTCAGTCAAAACATTGAAGAGTTGAAAAGTCTTA
TATTTCAGAAATGGAAATTTAAGCATACTGGCTAATTGCTGATATTCCTG
GCATAGTCAAGGGAGCCCACGAAAACATTGGTCTTGGACATGAGTTCTTA
CGCCACGTAGAACGTTGCCATATGTTAATGTATGTTATGGACTGTTCGTC
ACCAGACATGCTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTT
ACAAAGCTGGACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATC
GATTTGATACAAGACCAGGATGAAATGAGAAATAACATACAACAACATGT
AAACATGCCTGTTGTCCCACTCTCTGCTAAATTCAGTCAAAACATTGAAG
AGTTGAAAAGTCTTATATTTCAGAAATGGAAATTTAAGCATACTGGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:2061630..2068027 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 763-1125:364 |
| Aaloc | 622-759:740 |
| Aaloc | 502-621:1308 |
| Aaloc | 397-498:1685 |
| Aaloc | 220-396:3337 |
| Aaloc | 139-216:5869 |
| Aaloc | 1-135:6399 |
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