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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000056_pilon:256356..258515- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038409 ID=XLOC_038409|Name=XLOC_038409|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2160bp|location=Sequence derived from alignment at sc0000056_pilon:256356..258515- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGTTCAAGTCGTGCAATCAGTGGGGAAAACAAACTCGATAACTGACCC
AAACCTCCGGACGCTGATGAGAACTCTGACATCAGCTGGTGCAAATATAA
GAGGATCACCGTATTGCAAACAAGGATATAGACGAGAAATCTTCGGTCTC
ATGGTTAAGTTTGGTACCCCTCCTTTATGGATAACTATTAGTCCAGCAGT
GGTACACTCTCCTATCTTTCTACGTTTTGCTGGTCACAATATCAATCTTG
AGAGTCTAACCCTTTCTGATTTACCAGCAGCAGTTGATCGAGCAAAGATC
GTGGCAAAAGATCCAGTAGCAGCTGCACGATTTTTCAACTCAATGATTGA
CTCTTTTACAACTCACCTTCTTGGCTATAATCAGTCTGCAGGAGGGGTCT
TTGGGCATCCTTCAGCATTTTATGGGTGTATTGAAGAACAAGGCACTGGT
ACTTTACACATTCATATGCTTGTGTGGTTAAAGGGTTTCAGAGCCATTTC
CGATCTTGAAGCAGATCTTAAAAGTGAAACATTCAAAGAAAACCTTATCA
AATACTTAGAAGCAACAATCAAACAGGGCTATATTGGCAATGATGTTGAA
ACAATACCAGATGTTGATGTATCAGAAATATCGACGAAGCGTCCAACAGA
TCCATCTTCTGACAACTTTGAAAAAGAACTTGCTGACGACGTTAACAAAT
TGGTTAAAGTGGCTAACACTCACAGACATTCGTTTACCTGTTACAAATAT
AGGAAAGCTCGTGAGTGTAGATTCGGTTTTCCACGCGAACTGCAACCCGA
GACAGTTATAACCGAAGATGAAATACTACTGAAAAGAACAAATACCATCA
TCAACAACTTTAACCCTATCCTCATGACGTCAATAAGAAGCAACCATGAT
ATAAAATTCATACCCAGCGGAAAAGATGGGAAATCATGTGTGTTCTACAT
GACAGACTACGCCACAAAATCCCAACTTTCTACCCACCAAATGCTTCCTC
TGATTGCCGCCTCGAAAAAGGTTGTACAAGCTTCAAACACCAACTCGAGC
GTTGTTGAAAGGTCAAAAGCATTGATCACAAAATGTCTCAACAGAATTAC
GACCGAAACGGAGATATCAGGATCGCATGTTTCTCATTTTCTCCTTGGTC
ACACAGATAAGAAAACATCGCACTCGTTCATCCGCCTCAATCTACATTCT
TGTTTGGCCTGGATCCATGATGAAATGAAGAAGTATGATGCACTAGATGA
TGACATTCTGACTGATGTCGTTGATGATGAGGGAAATGAAACTGCAAGCT
ATTCGATTCTGAGCGGTAATAATGGTTTGGTCTTAGTGAATCAAATGGTT
GATTATCTAAATAGAGGGGATGAATTGTCATGTATGCCGCTTTATGAATA
TTTCTCCAAAGTTTATAACACCACTTTGTCATCTAATGAACGAAGAAAGC
TGGAAAATCATGGCCCAAAGAGACGAGGAAGGAAACCCCAACCAAGACAT
CTTTTTGCACCTTCTCATCCGCAATCTGAGACACATGTACAAGTGACAAG
AACTGATTCAATTGTTCCTTCGTTATCACTTTTGCCGCCAAGTGAAGAAA
GTAATCCAGAGAAGTTCCACATTTGCATGCTTTTGTTGTTCAAACCGTTC
GTTGAATTCACTGACCTGTACAATGGTATATCATGGGAAGACTCTTTTCT
GAATACAAATTTTGACAGCTATTCACTTTTCATTAACAATATCAAAGAAA
TGCATGTTGGTTTAAAAGAAAAAGAAGATAACCTACAAAACGGAAACAAG
GATAACGAAGAACATCCAATGGAGGAAGATGTCGACTTCTCAATTGAAGC
AAGTGATAAAGACGAGGACCTGGTTGAAGTTAACCAAAAAGATCTCGATT
CCGCTACTTCCCAGGCTCTTGATATCATTCAGTCAAGTGGGTGGTTACAT
GCAAACCCTTCGATAGTTTCTCAAGGAGATTGTCAAAGAGATTTTTCATC
AACAACATTGTCACAACAAAGTCAATGGAAATTAGATATTCGAGAGCAGA
ACACGTCTAAACTTGAACAAATATATTCGTGTGAAACCAACAGCATGCAA
GAATGGCAAGAACGTACCGAGTTTAACGGAAATGAAACTAATAACTTGAT
GGAAGATGTT Coding sequence (CDS) from alignment at sc0000056_pilon:256356..258515- >XLOC_038409 ID=XLOC_038409|Name=XLOC_038409|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4320bp|location=Sequence derived from alignment at sc0000056_pilon:256356..258515- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGTTCAAGTCGTGCAATCAGTGGGGAAAACAAACTCGATAACTGACCC
AAACCTCCGGACGCTGATGAGAACTCTGACATCAGCTGGTGCAAATATAA
GAGGATCACCGTATTGCAAACAAGGATATAGACGAGAAATCTTCGGTCTC
ATGGTTAAGTTTGGTACCCCTCCTTTATGGATAACTATTAGTCCAGCAGT
GGTACACTCTCCTATCTTTCTACGTTTTGCTGGTCACAATATCAATCTTG
AGAGTCTAACCCTTTCTGATTTACCAGCAGCAGTTGATCGAGCAAAGATC
GTGGCAAAAGATCCAGTAGCAGCTGCACGATTTTTCAACTCAATGATTGA
CTCTTTTACAACTCACCTTCTTGGCTATAATCAGTCTGCAGGAGGGGTCT
TTGGGCATCCTTCAGCATTTTATGGGTGTATTGAAGAACAAGGCACTGGT
ACTTTACACATTCATATGCTTGTGTGGTTAAAGGGTTTCAGAGCCATTTC
CGATCTTGAAGCAGATCTTAAAAGTGAAACATTCAAAGAAAACCTTATCA
AATACTTAGAAGCAACAATCAAACAGGGCTATATTGGCAATGATGTTGAA
ACAATACCAGATGTTGATGTATCAGAAATATCGACGAAGCGTCCAACAGA
TCCATCTTCTGACAACTTTGAAAAAGAACTTGCTGACGACGTTAACAAAT
TGGTTAAAGTGGCTAACACTCACAGACATTCGTTTACCTGTTACAAATAT
AGGAAAGCTCGTGAGTGTAGATTCGGTTTTCCACGCGAACTGCAACCCGA
GACAGTTATAACCGAAGATGAAATACTACTGAAAAGAACAAATACCATCA
TCAACAACTTTAACCCTATCCTCATGACGTCAATAAGAAGCAACCATGAT
ATAAAATTCATACCCAGCGGAAAAGATGGGAAATCATGTGTGTTCTACAT
GACAGACTACGCCACAAAATCCCAACTTTCTACCCACCAAATGCTTCCTC
TGATTGCCGCCTCGAAAAAGGTTGTACAAGCTTCAAACACCAACTCGAGC
GTTGTTGAAAGGTCAAAAGCATTGATCACAAAATGTCTCAACAGAATTAC
GACCGAAACGGAGATATCAGGATCGCATGTTTCTCATTTTCTCCTTGGTC
ACACAGATAAGAAAACATCGCACTCGTTCATCCGCCTCAATCTACATTCT
TGTTTGGCCTGGATCCATGATGAAATGAAGAAGTATGATGCACTAGATGA
TGACATTCTGACTGATGTCGTTGATGATGAGGGAAATGAAACTGCAAGCT
ATTCGATTCTGAGCGGTAATAATGGTTTGGTCTTAGTGAATCAAATGGTT
GATTATCTAAATAGAGGGGATGAATTGTCATGTATGCCGCTTTATGAATA
TTTCTCCAAAGTTTATAACACCACTTTGTCATCTAATGAACGAAGAAAGC
TGGAAAATCATGGCCCAAAGAGACGAGGAAGGAAACCCCAACCAAGACAT
CTTTTTGCACCTTCTCATCCGCAATCTGAGACACATGTACAAGTGACAAG
AACTGATTCAATTGTTCCTTCGTTATCACTTTTGCCGCCAAGTGAAGAAA
GTAATCCAGAGAAGTTCCACATTTGCATGCTTTTGTTGTTCAAACCGTTC
GTTGAATTCACTGACCTGTACAATGGTATATCATGGGAAGACTCTTTTCT
GAATACAAATTTTGACAGCTATTCACTTTTCATTAACAATATCAAAGAAA
TGCATGTTGGTTTAAAAGAAAAAGAAGATAACCTACAAAACGGAAACAAG
GATAACGAAGAACATCCAATGGAGGAAGATGTCGACTTCTCAATTGAAGC
AAGTGATAAAGACGAGGACCTGGTTGAAGTTAACCAAAAAGATCTCGATT
CCGCTACTTCCCAGGCTCTTGATATCATTCAGTCAAGTGGGTGGTTACAT
GCAAACCCTTCGATAGTTTCTCAAGGAGATTGTCAAAGAGATTTTTCATC
AACAACATTGTCACAACAAAGTCAATGGAAATTAGATATTCGAGAGCAGA
ACACGTCTAAACTTGAACAAATATATTCGTGTGAAACCAACAGCATGCAA
GAATGGCAAGAACGTACCGAGTTTAACGGAAATGAAACTAATAACTTGAT
GGAAGATGTTTTGGTTCAAGTCGTGCAATCAGTGGGGAAAACAAACTCGA
TAACTGACCCAAACCTCCGGACGCTGATGAGAACTCTGACATCAGCTGGT
GCAAATATAAGAGGATCACCGTATTGCAAACAAGGATATAGACGAGAAAT
CTTCGGTCTCATGGTTAAGTTTGGTACCCCTCCTTTATGGATAACTATTA
GTCCAGCAGTGGTACACTCTCCTATCTTTCTACGTTTTGCTGGTCACAAT
ATCAATCTTGAGAGTCTAACCCTTTCTGATTTACCAGCAGCAGTTGATCG
AGCAAAGATCGTGGCAAAAGATCCAGTAGCAGCTGCACGATTTTTCAACT
CAATGATTGACTCTTTTACAACTCACCTTCTTGGCTATAATCAGTCTGCA
GGAGGGGTCTTTGGGCATCCTTCAGCATTTTATGGGTGTATTGAAGAACA
AGGCACTGGTACTTTACACATTCATATGCTTGTGTGGTTAAAGGGTTTCA
GAGCCATTTCCGATCTTGAAGCAGATCTTAAAAGTGAAACATTCAAAGAA
AACCTTATCAAATACTTAGAAGCAACAATCAAACAGGGCTATATTGGCAA
TGATGTTGAAACAATACCAGATGTTGATGTATCAGAAATATCGACGAAGC
GTCCAACAGATCCATCTTCTGACAACTTTGAAAAAGAACTTGCTGACGAC
GTTAACAAATTGGTTAAAGTGGCTAACACTCACAGACATTCGTTTACCTG
TTACAAATATAGGAAAGCTCGTGAGTGTAGATTCGGTTTTCCACGCGAAC
TGCAACCCGAGACAGTTATAACCGAAGATGAAATACTACTGAAAAGAACA
AATACCATCATCAACAACTTTAACCCTATCCTCATGACGTCAATAAGAAG
CAACCATGATATAAAATTCATACCCAGCGGAAAAGATGGGAAATCATGTG
TGTTCTACATGACAGACTACGCCACAAAATCCCAACTTTCTACCCACCAA
ATGCTTCCTCTGATTGCCGCCTCGAAAAAGGTTGTACAAGCTTCAAACAC
CAACTCGAGCGTTGTTGAAAGGTCAAAAGCATTGATCACAAAATGTCTCA
ACAGAATTACGACCGAAACGGAGATATCAGGATCGCATGTTTCTCATTTT
CTCCTTGGTCACACAGATAAGAAAACATCGCACTCGTTCATCCGCCTCAA
TCTACATTCTTGTTTGGCCTGGATCCATGATGAAATGAAGAAGTATGATG
CACTAGATGATGACATTCTGACTGATGTCGTTGATGATGAGGGAAATGAA
ACTGCAAGCTATTCGATTCTGAGCGGTAATAATGGTTTGGTCTTAGTGAA
TCAAATGGTTGATTATCTAAATAGAGGGGATGAATTGTCATGTATGCCGC
TTTATGAATATTTCTCCAAAGTTTATAACACCACTTTGTCATCTAATGAA
CGAAGAAAGCTGGAAAATCATGGCCCAAAGAGACGAGGAAGGAAACCCCA
ACCAAGACATCTTTTTGCACCTTCTCATCCGCAATCTGAGACACATGTAC
AAGTGACAAGAACTGATTCAATTGTTCCTTCGTTATCACTTTTGCCGCCA
AGTGAAGAAAGTAATCCAGAGAAGTTCCACATTTGCATGCTTTTGTTGTT
CAAACCGTTCGTTGAATTCACTGACCTGTACAATGGTATATCATGGGAAG
ACTCTTTTCTGAATACAAATTTTGACAGCTATTCACTTTTCATTAACAAT
ATCAAAGAAATGCATGTTGGTTTAAAAGAAAAAGAAGATAACCTACAAAA
CGGAAACAAGGATAACGAAGAACATCCAATGGAGGAAGATGTCGACTTCT
CAATTGAAGCAAGTGATAAAGACGAGGACCTGGTTGAAGTTAACCAAAAA
GATCTCGATTCCGCTACTTCCCAGGCTCTTGATATCATTCAGTCAAGTGG
GTGGTTACATGCAAACCCTTCGATAGTTTCTCAAGGAGATTGTCAAAGAG
ATTTTTCATCAACAACATTGTCACAACAAAGTCAATGGAAATTAGATATT
CGAGAGCAGAACACGTCTAAACTTGAACAAATATATTCGTGTGAAACCAA
CAGCATGCAAGAATGGCAAGAACGTACCGAGTTTAACGGAAATGAAACTA
ATAACTTGATGGAAGATGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000056_pilon | genome | sc0000056_pilon:256356..258515 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2160:2161 |
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