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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000051_pilon:1178704..1180789- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038340 ID=XLOC_038340|Name=XLOC_038340|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2086bp|location=Sequence derived from alignment at sc0000051_pilon:1178704..1180789- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCCAGCGAAAATTTGTAAATAATTTTGTGAAGAAAAATCAGATTAT
AAACGACACTATGAGATATTTATGTATCAATTTGTTTTTTTGTATAGTGT
ACATTGGTACATTAATATTGTCAGTACTTGGAAGTAACTCCCCATTTACA
CCTGCTGTTAGATATCATGGTCCACACCAAAATGCATCGTTGAACTATAG
TTATATCAATATCAAATACTTGAAAAACCAGAAATTAAACGTCGTACCAT
TCGCTGTTTTCAATCTACTAAACCGTACTTCCTGTGTTAAAGAATGCGTT
AAAACCCATGGTGTTTGTAAAAGTTTGAACGTCAAAAAGATAAATGGTGG
ATTTAATTGCGAAATCCTGGATACTGATAAATATAGTGAAGTGGATGGAG
CACTGATCGCTGATTCGGAGACGACACATTACGTCATAGCCGTAAGTTGA
ATACAGAGTATCTGATTATGTCACTAATTATAGTCCGTTCACGATCATCT
GGATAATGAATATTTGTTGTTTTTGATAGTTAAAAGCAAAGTTTTTATTT
AAAAGCGATCATAATTGTATAATTGTACAACGTGTACTTAGCTCAAGGCT
AAAAACTGTAATATAAACATTGCACTACTATAAAACCCAATTTGGGCTCA
GGGTTGAGTTGCTAAGGACTTTCCGAATTTTAGCCCAAAAAATTACTTAT
GGATTTTAAGCCAAAAATGTCTAGAAACTTCAAAAAATCTTGTCCAAATG
ATCTCTAATTATGTACTCGAACCATCGGTACGTCGGTCAAATAATGCCTA
AAAATGCTTCTTAACTATTAATTATTTTTCCATAGAACCAATGCTTTAAA
AATCCATGTGATGGAGGGTGCAGTAGATGCAAACCAATCTACCATAACAA
CTCTTTCCACTGCGGTAAGTTATTTTCCATTTTCCATCAACCTTTAAAAT
TTGTGATTTCAAACATTTACTTAGGCCCCTCCACTTAGGACCGCAGATTT
ATAAAGCCCGAATGGCTAGACAGAGTAACTTGGCTGAAAAGTGTGGCGTG
GTCGATAGGAAATTCTACCTAGGTCACGTGACTTTACAACAGAAAATCAA
CATCGCATGATTTTTGCATGATTTTTGCACTATTCACTTTTTTGCTTGGC
TAACCCTTAGGAAACTGTGCGTAGGGCTCTTAAACTGTTGATCGTCCAGG
CTATCTCTACATCTGACTTACAGCTGCTGCAGACATGATTTGTTTTCTTT
TCAAAATCACTTTCAGGTTCTAATGTGAAATAAACAGAGGGCTTCCGAAT
GTACTCTTAGGTTCCAAATAAACGCCCCCCCCCGCTTGTTAATCTTTCGA
GAATTTTCCAATTCCCCCGGACCTTATCAGGACCCCCCGTTTATAAATTC
TTAGGAATATTTTCAACTGTCAAAGAGAAGGCCCCTTATTTCGCTCTAAA
AAGCTTGATTTTAGCTTATACTTACCTTATTTTTTCCAACCCCCCAGCAA
TTAGCCCCCCCGTTTATTTGGAACCAGTATGCGGTTGTATTTTGCTTTTT
TTTTCTAGAACAAATTTATTGCTCCTGTAAAGAAGTAACATCAAAACGCC
TTCCATCCGGTTACTACAATTTAAAATTTGGAAATATTTCCGCCAAAGGA
TTCTGTGATACTCAAACTGACGGAGGTATAATTTCTATTGACCTTATCAG
AGTTTTTGATTTTTCTAAAAAAGCGATGCATTGTGGGATTGTTTTGAGTG
TATTACAATAGAATTCCCTTGAGGAATTCCTAAGAGATTTCTATTGTAAT
ACACTCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAAC
TCCGATAAGGTTTATTCTAAAGGAGACTTGGGGCGAAAATAACAAATTGT
AGTGTTTCCGGAATGCCGGTGAGGGAAAAAGCTCTCATGTGGCCGGCCGG
TAATGAATTATTTTTTGCTATTTTTGATAACTTATGATCATTGAAAAAGA
ACTTTAAAGATAACTTTTTATGTACAAATAGTATGAATTAAGCCCTGAAT
ACCAATGTATCAACTATGCTAACGAACAAAACTTGA Coding sequence (CDS) from alignment at sc0000051_pilon:1178704..1180789- >XLOC_038340 ID=XLOC_038340|Name=XLOC_038340|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1350bp|location=Sequence derived from alignment at sc0000051_pilon:1178704..1180789- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCCAGCGAAAATTTGTAAATAATTTTGTGAAGAAAAATCAGATTAT
AAACGACACTATGAGATATTTATGTATCAATTTGTTTTTTTGTATAGTGT
ACATTGGTACATTAATATTGTCAGTACTTGGAAGTAACTCCCCATTTACA
CCTGCTGTTAGATATCATGGTCCACACCAAAATGCATCGTTGAACTATAG
TTATATCAATATCAAATACTTGAAAAACCAGAAATTAAACGTCGTACCAT
TCGCTGTTTTCAATCTACTAAACCGTACTTCCTGTGTTAAAGAATGCGTT
AAAACCCATGGTGTTTGTAAAAGTTTGAACGTCAAAAAGATAAATGGTGG
ATTTAATTGCGAAATCCTGGATACTGATAAATATAGTGAAGTGGATGGAG
CACTGATCGCTGATTCGGAGACGACACATTACGTCATAGCCATGGGCCAG
CGAAAATTTGTAAATAATTTTGTGAAGAAAAATCAGATTATAAACGACAC
TATGAGATATTTATGTATCAATTTGTTTTTTTGTATAGTGTACATTGGTA
CATTAATATTGTCAGTACTTGGAAGTAACTCCCCATTTACACCTGCTGTT
AGATATCATGGTCCACACCAAAATGCATCGTTGAACTATAGTTATATCAA
TATCAAATACTTGAAAAACCAGAAATTAAACGTCGTACCATTCGCTGTTT
TCAATCTACTAAACCGTACTTCCTGTGTTAAAGAATGCGTTAAAACCCAT
GGTGTTTGTAAAAGTTTGAACGTCAAAAAGATAAATGGTGGATTTAATTG
CGAAATCCTGGATACTGATAAATATAGTGAAGTGGATGGAGCACTGATCG
CTGATTCGGAGACGACACATTACGTCATAGCCAACCAATGCTTTAAAAAT
CCATGTGATGGAGGGTGCAGTAGATGCAAACCAATCTACCATAACAACTC
TTTCCACTGCGAACCAATGCTTTAAAAATCCATGTGATGGAGGGTGCAGT
AGATGCAAACCAATCTACCATAACAACTCTTTCCACTGCGAACAAATTTA
TTGCTCCTGTAAAGAAGTAACATCAAAACGCCTTCCATCCGGTTACTACA
ATTTAAAATTTGGAAATATTTCCGCCAAAGGATTCTGTGATACTCAAACT
GACGGAGGTAACAAATTTATTGCTCCTGTAAAGAAGTAACATCAAAACGC
CTTCCATCCGGTTACTACAATTTAAAATTTGGAAATATTTCCGCCAAAGG
ATTCTGTGATACTCAAACTGACGGAGGTACCAATGTATCAACTATGCTAA
CGAACAAAACTTGAACCAATGTATCAACTATGCTAACGAACAAAACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000051_pilon | genome | sc0000051_pilon:1178704..1180789 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-675:37 |
| Aaloc | 523-639:527 |
| Aaloc | 442-519:1252 |
| Aaloc | 1-441:2087 |
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