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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000051_pilon:1328553..1333310- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038336 ID=XLOC_038336|Name=XLOC_038336|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4758bp|location=Sequence derived from alignment at sc0000051_pilon:1328553..1333310- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGATTACGGGCCTACGACGACGACCACAAATACTTCAAGTTTCGA
ACCGTTTAACGCAGATATTTTCAAGGAAGCAAAATTGCAAAAGGAATTGA
ACGACAGTAAAGACTCTGATGAAGGGTTTAGCTCATCATTTTCACCTACT
AGTGAATCTTCCATGATTCAAGGAGAGGCAATTTCTACAAGTTTACATCT
GTGGGGTAACAACTCTGCTGACAAAGACGACCAATATTTTATCAATTCAT
TGGCTCCGGTGAGTTCAAATTCCTCCTTCCTTCCTCAAAGTTCAAGACGT
ACAGCACAAGCACCATCTCCTATTCAAAATGTCAAGAAGCCCTCTCCTGC
TTTATCAAATTATTTGGCCACAAATAAGGCTGCAGCTCATTCGTTGGGAG
TCTCATCAAATGGAAATGATTGGAATCAACAACAACCCCCAACTCAAACT
TCAAGTTGGCCCATGAACCCACCACCACCAAATCCCATTGGAACAAATGC
TAATTGGAATTTGCCCCACATGAAGAATGGTATGAGTACCCATACTCAAT
CTGCTCCTGCTTTGCAACACATGAATAATGCTCAACAGATTGCTTATCAA
CTTCAACAACAAAAGAATATGCTGACCAAAACAAATGGAATCATGACTAA
CGGACACTCGTCTGGAAATCACCCTTTCCCTCCAAATATCGTACACTCGA
AGAATATGAAGAATAGTATTCGTGGTTTTCCTGCCTCCCAAGTTCCCCTT
ACTTCAACAGGAAGGGCCCATCATCATCATCATAATCATCATCATCTACC
TCATCATGGAAACACAGGAATAGATTCAACAATTGTTGAAGATATTGGGC
ATTTGACAAACAGTTTTTCAAATCTGTCTACAAGCAGTGAACACTCGCAT
TCAAATTCTCATCCTGCTAATGGCTTTTCATCAAACCATCAGGTAAATAT
TTTTTTTCGCTTCTTTTTTTCTCAAATGTCTTGATATAGTTTTGTGTAAA
GAGTGGTTCATAATATTTTTCATTTTTATTTTTGGTATCTTAGCGACATT
TTTGAAAACAAAAGAAGTGCGTCGACCCGAGAGAGGTTTTGTTACTACGA
AAAGTTTTTTATTTAGAATCAGCTTTTTTGACAAATAATATTTTCATTTC
TAGTTATGACATCCATGCATACTTTTATGATAAACAGTAGAATTTTCTCT
CTGAATATTTAGATATCTTTTGTTTGCTGAGAGTTCTCGTAATAAAAAAT
TTAGCTAGCTTTCTCTTGAAGGGGGCAGGTGTTATGAAAAAAAAAGTTTT
TTTTTATTGCATGATGTGTTAAGATATAAAAAGGTTTTTCATACTGAAAC
ATGTTGGATTGTGTGAAAAGAACGCATGTCCATATATTTTCTGTTTCTCA
CCCGGCTACTTTTCTCTTTTTCCTCTCAAAAAATTTATGCAATCTTTTTC
ATTGCACCGCGAAAAAATAACAAAAGAAAACTCTCAGAAACCGCTTTCCA
AGTAGACAAAACGTTTGACTTACTGCTCAAAAATTATAAGAAAAATTACA
AGATTAAAATGAATTACGAAAAAGTATGAAAGAAAATATAGTAATTGGAA
AGAATTATTTTATTGTTGTGTCAGTAACGATTGATTGGGTGACCTAATTG
ACCTTTTTGTCACTTTAAATTCAAAGTGTGTTGTTAATTGATCAATGTTT
ATTGTGAACATGTGTTTCTTGTCAGACGCACATGGATGAACTGTATTTGC
TTTTAGCGTAGTACACCGGTGCTTCTACGTCAGGCACGTGTTTTAATTTA
TAGAAAAATGGACAGAAAAAACAAGCCTTTTTCTATTCGAGTCTCATTTC
TATCTGTGGGCTTCAGTGAGTAAACAAGTTTGTCTTGAATACAGTTGAAT
AATGAAGTTGTATTTCCAATTTCAGGATAGACGCGGCGAGGATGGTATGA
AATACTCATCCCTCGAAAGTCGCTTCCTTGGTGATGTATTCAAGTCACCA
ATTGATTCAGATAATCTCAATAACTATGACGGTAAGTTGGTTTTCAATCT
AGCCATTTTTTAAAAAGATTTTAACAATATTGTATTCTGTTTTTTCTTCT
ATTTGACCTCCCCTACTTTTTTTGTCCATCATTTGCTTTGAATTATGTAT
AACTTTAACGAGGCTATTCAGCGCATTCAAAAACGTGTTTTGGCTTGAAT
AATGCGCCGTTTCGACATTAATTAGTTTTTGCCGTTTTGATTTTTTCATA
ATGCTGTCCCTAGTTGCTAGGAGACAAGTGCACCGATTAAATATTACAAG
TGATTTTTTCTTGCAGCTTTTCGAGCATACAACAATCAAAAGAGTAAAGG
CTTCCCCAGAGCTAGAGAAGGTTTGTTTATTTTATTAGTATGTTAACTGT
AAATGCTTTAAAGGGGTTATTGTGTAATATTGATTAGGCTTTTACTTTGC
CCCCTTTCTTACCCTTGATCAAAAGATAGATCGTCTTTCGAGTGACTCAC
TTTCTTCAATTGCTATTACTATATTTTCCCATTTTTTAATTCTTCAGATC
AAATTGTTCCTTCTATTGGCTCGTCATTAAATGGTTCTCCGAGATCTGAC
TTGGATTTTGGAATTGAAAGATTCTCAAGAAAGGTTTTTGTTGGTGGACT
CCCCCCAGACATCGATGAAGGTAAGTAGGAAACTTCTCTTATTTATTTAT
TTATTGTGAAACCATTGTTCAATGACAACATCGAGCTTGATTATGACTCA
TTGGCATTTAGAACTTGTCCCCATGAGATAGGAACATCTGCAGTATTTTC
ATTGTTTGAAGGGAGAAGAAAACAAAAAGAAGTCATTAAATATGCATCCC
CCTGTACATTTTGATCAAAATTTTTCTTTTCATTTTCGCTTCCCCATCTT
CTTATTTTTTATTATATTAAATAGATTATATCTGGTTTACAAAAATATGG
CACCCTGAAAGGCTTTTCTCCTTTATCATAGACACATTTATTATTCCTTA
TTTTGGGAAAACATGAGTAATTTCTAAATTTATTCACAATTTCTCTGCTC
TTATTTTTTAGATGAAATTCATGCAAGTTTTTGTAGATTTGGCCCCCTTA
CTGTTGACTGGCCCCACAAAGCAGAAAGCAAATCATATTTTCCTCCGAAA
GGTAGATTTCTAATAATTTGACATTCCTCTCATTAATTTTGTATTGTCCT
AATGCTCGATGTCACATAACATAGCGATACTTTAAAAAATTTGTTATACA
AGAAAGGGTTATACAATGTAAACTATATTGCAGTTGCAAGCTTAAGATAA
AATAATCTGCTCATATTATTATATTAAAATATTGCTTGGCAGGTGAAATT
TTTTCAGCTATGGGCTTTAATTTGAGTAATTGAATTTAAGCCCCACGTTA
AATGATGAGATTTCAGCCCCCCCCTCCCCCCCAATTATATTAGGTCCCCT
AAAAATTATTGTACTTCCAGCCCACTCCTATTTATGGAAAGGAGGGTGTA
ATCCCCTCTTTCCGGGGGGGCTGATGATCAGGATGAAGTGTTGGTTCTGG
TTGGTTCACTCCTGGGTTGATCTATCTCAAAGCAATGGCTGTCCACCCTT
CAATACTAAACAGAAGGCTATTGTGTATCCCCTTTATCACTTTGTTACAT
ACTTTTTAAACTCTTATCTTAAATTCTTTTTTAGGGTATGCATTCCTCTT
GTACAAAGATGAAATATCTGTGCAAAGACTCATTGATTGTTGCATCATGC
AAGATGGGAAACTCTATCTCTGTGTGTCTAGCCCAACAATCAAAGACAAA
CCAGTCCAAATTCGACCATGGAATCTGGCTGATGCTGACTTTGTCATGGA
TGGCTCACAACCCTTGGATCCAAGAAAAACCATTTTTGTTGGTGGTGTCC
CAAGACCTCTTCGTGCTGTTGAATTAGCCATGATCATGGACCGACTTTAT
GGCGGAGTCTGCTATGCTGGTATTGATGTTGACCCAGAACTGAAATACCC
AAAAGGTGCTGGAAGAGTTGCCTTTTCAAACCAACAAAGCTACATTGCCG
CAATCAGTGCAAGATTCATTCAGCTGCAACATGGAGAAATTGATAAGAGG
GTAAGTGTCAACTCACTATAGTTGCTTTAGCTCACCTGAATGACAATGTT
TGACAATTCCTGAATAATTATCGAATTAACTTCACCTTACTTTTAATGGC
CCTGCAAATAACTACTGTGTTTTTAGTTACTTTAATCTTGATGAATCTTT
CCATTGTCCAGGTTGAAGTTAAACCATATGTCCTAGATGATCAAATGTGC
GACGAATGTCATGGTGTCAGATGTAATGGAAAATTTGCTCCATTCTTCTG
TTCAAACATCACTTGCCTTCAATATTATTGTGAGCAGTGTTGGGCAATCA
TTCATGCAAGACCTGGACGTGAATTTCACAAGCCACTTGTCAAGGAAGGT
GGTGATCGTCCAAGACAAACAAGTCTTGGCTTGAGATGGTAAGCTACTAC
TTACATTATCACTAACATTGGTTGCCTTGGCAGATTGTCAACCAAATTAG
AATTAATTTTGTTAATCAAAAATTTCCACAAAAAATATTAAGGTCATTTC
AGATTGTGCATCATGGGAATAGAATTTTGCATTGTACTTCATTAAGTGGA
TTTGTGGAATTATATTTCTTTTGTTTTAAATCTCTCCTTTTTTTTCTGTT
CAGGCCCTTGAAAACCACACCCCTTGGTGGAATTCCTTCCATTCCATTAC
TTCAGTGA Coding sequence (CDS) from alignment at sc0000051_pilon:1328553..1333310- >XLOC_038336 ID=XLOC_038336|Name=XLOC_038336|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4026bp|location=Sequence derived from alignment at sc0000051_pilon:1328553..1333310- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGATTACGGGCCTACGACGACGACCACAAATACTTCAAGTTTCGA
ACCGTTTAACGCAGATATTTTCAAGGAAGCAAAATTGCAAAAGGAATTGA
ACGACAGTAAAGACTCTGATGAAGGGTTTAGCTCATCATTTTCACCTACT
AGTGAATCTTCCATGATTCAAGGAGAGGCAATTTCTACAAGTTTACATCT
GTGGGGTAACAACTCTGCTGACAAAGACGACCAATATTTTATCAATTCAT
TGGCTCCGGTGAGTTCAAATTCCTCCTTCCTTCCTCAAAGTTCAAGACGT
ACAGCACAAGCACCATCTCCTATTCAAAATGTCAAGAAGCCCTCTCCTGC
TTTATCAAATTATTTGGCCACAAATAAGGCTGCAGCTCATTCGTTGGGAG
TCTCATCAAATGGAAATGATTGGAATCAACAACAACCCCCAACTCAAACT
TCAAGTTGGCCCATGAACCCACCACCACCAAATCCCATTGGAACAAATGC
TAATTGGAATTTGCCCCACATGAAGAATGGTATGAGTACCCATACTCAAT
CTGCTCCTGCTTTGCAACACATGAATAATGCTCAACAGATTGCTTATCAA
CTTCAACAACAAAAGAATATGCTGACCAAAACAAATGGAATCATGACTAA
CGGACACTCGTCTGGAAATCACCCTTTCCCTCCAAATATCGTACACTCGA
AGAATATGAAGAATAGTATTCGTGGTTTTCCTGCCTCCCAAGTTCCCCTT
ACTTCAACAGGAAGGGCCCATCATCATCATCATAATCATCATCATCTACC
TCATCATGGAAACACAGGAATAGATTCAACAATTGTTGAAGATATTGGGC
ATTTGACAAACAGTTTTTCAAATCTGTCTACAAGCAGTGAACACTCGCAT
TCAAATTCTCATCCTGCTAATGGCTTTTCATCAAACCATCAGATGGGTGA
TTACGGGCCTACGACGACGACCACAAATACTTCAAGTTTCGAACCGTTTA
ACGCAGATATTTTCAAGGAAGCAAAATTGCAAAAGGAATTGAACGACAGT
AAAGACTCTGATGAAGGGTTTAGCTCATCATTTTCACCTACTAGTGAATC
TTCCATGATTCAAGGAGAGGCAATTTCTACAAGTTTACATCTGTGGGGTA
ACAACTCTGCTGACAAAGACGACCAATATTTTATCAATTCATTGGCTCCG
GTGAGTTCAAATTCCTCCTTCCTTCCTCAAAGTTCAAGACGTACAGCACA
AGCACCATCTCCTATTCAAAATGTCAAGAAGCCCTCTCCTGCTTTATCAA
ATTATTTGGCCACAAATAAGGCTGCAGCTCATTCGTTGGGAGTCTCATCA
AATGGAAATGATTGGAATCAACAACAACCCCCAACTCAAACTTCAAGTTG
GCCCATGAACCCACCACCACCAAATCCCATTGGAACAAATGCTAATTGGA
ATTTGCCCCACATGAAGAATGGTATGAGTACCCATACTCAATCTGCTCCT
GCTTTGCAACACATGAATAATGCTCAACAGATTGCTTATCAACTTCAACA
ACAAAAGAATATGCTGACCAAAACAAATGGAATCATGACTAACGGACACT
CGTCTGGAAATCACCCTTTCCCTCCAAATATCGTACACTCGAAGAATATG
AAGAATAGTATTCGTGGTTTTCCTGCCTCCCAAGTTCCCCTTACTTCAAC
AGGAAGGGCCCATCATCATCATCATAATCATCATCATCTACCTCATCATG
GAAACACAGGAATAGATTCAACAATTGTTGAAGATATTGGGCATTTGACA
AACAGTTTTTCAAATCTGTCTACAAGCAGTGAACACTCGCATTCAAATTC
TCATCCTGCTAATGGCTTTTCATCAAACCATCAGGATAGACGCGGCGAGG
ATGGTATGAAATACTCATCCCTCGAAAGTCGCTTCCTTGGTGATGTATTC
AAGTCACCAATTGATTCAGATAATCTCAATAACTATGACGGATAGACGCG
GCGAGGATGGTATGAAATACTCATCCCTCGAAAGTCGCTTCCTTGGTGAT
GTATTCAAGTCACCAATTGATTCAGATAATCTCAATAACTATGACGCTTT
TCGAGCATACAACAATCAAAAGAGTAAAGGCTTCCCCAGAGCTAGAGAAG
CTTTTCGAGCATACAACAATCAAAAGAGTAAAGGCTTCCCCAGAGCTAGA
GAAGATCAAATTGTTCCTTCTATTGGCTCGTCATTAAATGGTTCTCCGAG
ATCTGACTTGGATTTTGGAATTGAAAGATTCTCAAGAAAGGTTTTTGTTG
GTGGACTCCCCCCAGACATCGATGAAGATCAAATTGTTCCTTCTATTGGC
TCGTCATTAAATGGTTCTCCGAGATCTGACTTGGATTTTGGAATTGAAAG
ATTCTCAAGAAAGGTTTTTGTTGGTGGACTCCCCCCAGACATCGATGAAG
ATGAAATTCATGCAAGTTTTTGTAGATTTGGCCCCCTTACTGTTGACTGG
CCCCACAAAGCAGAAAGCAAATCATATTTTCCTCCGAAAGATGAAATTCA
TGCAAGTTTTTGTAGATTTGGCCCCCTTACTGTTGACTGGCCCCACAAAG
CAGAAAGCAAATCATATTTTCCTCCGAAAGGGTATGCATTCCTCTTGTAC
AAAGATGAAATATCTGTGCAAAGACTCATTGATTGTTGCATCATGCAAGA
TGGGAAACTCTATCTCTGTGTGTCTAGCCCAACAATCAAAGACAAACCAG
TCCAAATTCGACCATGGAATCTGGCTGATGCTGACTTTGTCATGGATGGC
TCACAACCCTTGGATCCAAGAAAAACCATTTTTGTTGGTGGTGTCCCAAG
ACCTCTTCGTGCTGTTGAATTAGCCATGATCATGGACCGACTTTATGGCG
GAGTCTGCTATGCTGGTATTGATGTTGACCCAGAACTGAAATACCCAAAA
GGTGCTGGAAGAGTTGCCTTTTCAAACCAACAAAGCTACATTGCCGCAAT
CAGTGCAAGATTCATTCAGCTGCAACATGGAGAAATTGATAAGAGGGGTA
TGCATTCCTCTTGTACAAAGATGAAATATCTGTGCAAAGACTCATTGATT
GTTGCATCATGCAAGATGGGAAACTCTATCTCTGTGTGTCTAGCCCAACA
ATCAAAGACAAACCAGTCCAAATTCGACCATGGAATCTGGCTGATGCTGA
CTTTGTCATGGATGGCTCACAACCCTTGGATCCAAGAAAAACCATTTTTG
TTGGTGGTGTCCCAAGACCTCTTCGTGCTGTTGAATTAGCCATGATCATG
GACCGACTTTATGGCGGAGTCTGCTATGCTGGTATTGATGTTGACCCAGA
ACTGAAATACCCAAAAGGTGCTGGAAGAGTTGCCTTTTCAAACCAACAAA
GCTACATTGCCGCAATCAGTGCAAGATTCATTCAGCTGCAACATGGAGAA
ATTGATAAGAGGGTTGAAGTTAAACCATATGTCCTAGATGATCAAATGTG
CGACGAATGTCATGGTGTCAGATGTAATGGAAAATTTGCTCCATTCTTCT
GTTCAAACATCACTTGCCTTCAATATTATTGTGAGCAGTGTTGGGCAATC
ATTCATGCAAGACCTGGACGTGAATTTCACAAGCCACTTGTCAAGGAAGG
TGGTGATCGTCCAAGACAAACAAGTCTTGGCTTGAGATGGTTGAAGTTAA
ACCATATGTCCTAGATGATCAAATGTGCGACGAATGTCATGGTGTCAGAT
GTAATGGAAAATTTGCTCCATTCTTCTGTTCAAACATCACTTGCCTTCAA
TATTATTGTGAGCAGTGTTGGGCAATCATTCATGCAAGACCTGGACGTGA
ATTTCACAAGCCACTTGTCAAGGAAGGTGGTGATCGTCCAAGACAAACAA
GTCTTGGCTTGAGATGGCCCTTGAAAACCACACCCCTTGGTGGAATTCCT
TCCATTCCATTACTTCAGTGAGCCCTTGAAAACCACACCCCTTGGTGGAA
TTCCTTCCATTCCATTACTTCAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000051_pilon | genome | sc0000051_pilon:1328553..1333310 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1960-2013:55 |
| Aaloc | 1732-1956:498 |
| Aaloc | 1318-1731:1073 |
| Aaloc | 1228-1314:1696 |
| Aaloc | 1105-1224:2210 |
| Aaloc | 1051-1101:2441 |
| Aaloc | 943-1047:2834 |
| Aaloc | 1-942:4759 |
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