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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000143_pilon:280925..283135- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038239 ID=XLOC_038239|Name=XLOC_038239|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2211bp|location=Sequence derived from alignment at sc0000143_pilon:280925..283135- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGTTGATAGGAATGAAATTGTGTCTGTTGAATTGCATGGATTTAGTGA
TAGCTCGTTGATTTTGTACTGTGGTGTTGTTTATTTAAGAGTTATCACTA
GATCTCATGCTAAAGCTTTCTTTTGGACTTCTAAGACGAAAGTCGCTCCT
TTAAAGAAGACTTCTATTCCTAGACTTGAATTGTTGGCTTGTTTGCTTCT
TACGAAATTGATATCGAATGTTGATGTGGCGTTGTGTGAACGACTGAGGA
TTAATCGTATTGTCTGTTGGTCGGATTCAACTGTTTCGCTTTGTTGGATT
AGAGGTAAAGAGAAGACTTGGAAAGCTTGGGTGGAAAACAGGGTTGTTAA
GATAAGAAAGGTTGTTTCTAGGGAGTCTTGGTTTCATGTTGCTGGTACTG
AAAATCCTGCCGATGCTCCTACTAGACCTGTTGAGGATTTCTCTGCTCTT
TTTCAAGACAAGTGGCTTTCTGGTCCTTCCTTTCTTTCTAATCTTGACAT
TGACTATGACAAAAGACGTGACAATAAAACCGAAATACCAATTGACGCAC
AAGTAGAACTTAGACGAACTGACGTTAACGTTATGACTGTGACTTCAGAT
AAGAAAGTTAGTCTGAGTGATGTGATCGATTTCTCTCGTCATGGATCCTT
ACGTAAGCTTGTAACTGTTGTAGCTTTCGTTCTTCGTTTCAAAAACAACT
TTTTGGCGAAGAAGTACAAACACGATAAAGTGCTAACAGAACTGACCGCA
GAAGAAACTACCAACGCACTTTCCATGATTCTACGCGATGAACAAGAACG
AATGACGAACCAACCAAACTTTGAGAAGACGAAATCAAACTTGAACGTAT
ACAAAGATGACGAAGGATACCACCGTGTCAAGAGTCGATTCAACGAGTCT
TCGCTACCAACAAAGAAGAATCCCTTACTGCTGCCTGAATCAACCGACTT
CACGAAATTGCTCATCAAAGATACGCATGAGAAGTGTTTGCATTTTGGTA
TTGAAACCACACTTGCCAAAATTCGCGAAAGATATTGGATAATTCGTGGA
AGAAAAGCTGTCAAGAATGTGCTTCGCAAATGTGTTAGTTGTAAACGGTT
TCAAGGGAGAACGATGAAACCACCGGAATCTCCTGAACTGCCAGAATTTC
GAGTGAACTATAACAACCACCCGTTTTCGTCGACTGGACTTGACTTTGCT
GGACCCCTCTTTGTAAAGAATAAAGGACTTCCAAGCTCAAAGGTATACAT
TTTGCTTTTTACTTGCGCTAGTAGTCGTGCAATCCATCTTGAACTCACTC
CTGACATGAAATCTCCTGCGTTCATACGGGGATTCCAACGCTTTGCTTCA
CGTCGTGGTACACCTGATGAAATCATAAACGACAACGCCAAGACCTTCAA
ATCGAAAGAAGTCAAACGTTTGATGACTCGATTGAATGTTCGGCAACGAT
TTATTCTGCCTGCTTCTCCATGGTGGGGAGGTTTTTATGAACGATTGGTT
CGCTCCGTCAAGACAGCATTAAAGAAAATTTTGAAAAAGGCCCTTCTAAC
CTTTGAAGAGCTACAGACGGTCTTGAGCGAAATTGAGGCCACTATCAATC
AAAGACCACTATGCTACACAAGTGATGATGAGATTGGGAACACGATCACG
CCTAATCATCTCATGTACGGTCGGCAACTCAATACGACCCCTTCTTTTAA
CGTTTTTAATACTTTAACAACACCTGACGATTGCACCAGACGAGCCCGAC
ATCTTATGAATTTGGTTAAGCACTTTCAAAAATGTTTCAAGAGCACCTAT
TTGAATGAACTTAAACAAAAACATTCATATGATAAGACCAGAACTTCCGA
ACTTAAGTTAACATTGAATGACGTTGTACTTATCAGAGACGATACACCAA
CACCGAGGACGCAATGGAGAATGGGAAAAGTTGAAAGCTTGGTAATTGGA
GCTGATGGAAAGATACGTGGTGCACGTTTGAAAGTCAACACGACGAATGG
TACCTCCACCATCCATCGACCTTTGCAGAAGATCATCCCATTTGAAATTG
CGGACGACACACCCACCGACGATGACCCAGCTGATAATCCTTTAAAGCCT
TCGAGTTCAGGTAGTGCGCGCGGCTATGAGCAAACAGTAAGAAGCAGAAT
ACGCCGGCGAGCTGCGATTGAAGGACAGAACTTACGTCGAGCTAGAGACT
TAGACAGATGA Coding sequence (CDS) from alignment at sc0000143_pilon:280925..283135- >XLOC_038239 ID=XLOC_038239|Name=XLOC_038239|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4422bp|location=Sequence derived from alignment at sc0000143_pilon:280925..283135- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGTTGATAGGAATGAAATTGTGTCTGTTGAATTGCATGGATTTAGTGA
TAGCTCGTTGATTTTGTACTGTGGTGTTGTTTATTTAAGAGTTATCACTA
GATCTCATGCTAAAGCTTTCTTTTGGACTTCTAAGACGAAAGTCGCTCCT
TTAAAGAAGACTTCTATTCCTAGACTTGAATTGTTGGCTTGTTTGCTTCT
TACGAAATTGATATCGAATGTTGATGTGGCGTTGTGTGAACGACTGAGGA
TTAATCGTATTGTCTGTTGGTCGGATTCAACTGTTTCGCTTTGTTGGATT
AGAGGTAAAGAGAAGACTTGGAAAGCTTGGGTGGAAAACAGGGTTGTTAA
GATAAGAAAGGTTGTTTCTAGGGAGTCTTGGTTTCATGTTGCTGGTACTG
AAAATCCTGCCGATGCTCCTACTAGACCTGTTGAGGATTTCTCTGCTCTT
TTTCAAGACAAGTGGCTTTCTGGTCCTTCCTTTCTTTCTAATCTTGACAT
TGACTATGACAAAAGACGTGACAATAAAACCGAAATACCAATTGACGCAC
AAGTAGAACTTAGACGAACTGACGTTAACGTTATGACTGTGACTTCAGAT
AAGAAAGTTAGTCTGAGTGATGTGATCGATTTCTCTCGTCATGGATCCTT
ACGTAAGCTTGTAACTGTTGTAGCTTTCGTTCTTCGTTTCAAAAACAACT
TTTTGGCGAAGAAGTACAAACACGATAAAGTGCTAACAGAACTGACCGCA
GAAGAAACTACCAACGCACTTTCCATGATTCTACGCGATGAACAAGAACG
AATGACGAACCAACCAAACTTTGAGAAGACGAAATCAAACTTGAACGTAT
ACAAAGATGACGAAGGATACCACCGTGTCAAGAGTCGATTCAACGAGTCT
TCGCTACCAACAAAGAAGAATCCCTTACTGCTGCCTGAATCAACCGACTT
CACGAAATTGCTCATCAAAGATACGCATGAGAAGTGTTTGCATTTTGGTA
TTGAAACCACACTTGCCAAAATTCGCGAAAGATATTGGATAATTCGTGGA
AGAAAAGCTGTCAAGAATGTGCTTCGCAAATGTGTTAGTTGTAAACGGTT
TCAAGGGAGAACGATGAAACCACCGGAATCTCCTGAACTGCCAGAATTTC
GAGTGAACTATAACAACCACCCGTTTTCGTCGACTGGACTTGACTTTGCT
GGACCCCTCTTTGTAAAGAATAAAGGACTTCCAAGCTCAAAGGTATACAT
TTTGCTTTTTACTTGCGCTAGTAGTCGTGCAATCCATCTTGAACTCACTC
CTGACATGAAATCTCCTGCGTTCATACGGGGATTCCAACGCTTTGCTTCA
CGTCGTGGTACACCTGATGAAATCATAAACGACAACGCCAAGACCTTCAA
ATCGAAAGAAGTCAAACGTTTGATGACTCGATTGAATGTTCGGCAACGAT
TTATTCTGCCTGCTTCTCCATGGTGGGGAGGTTTTTATGAACGATTGGTT
CGCTCCGTCAAGACAGCATTAAAGAAAATTTTGAAAAAGGCCCTTCTAAC
CTTTGAAGAGCTACAGACGGTCTTGAGCGAAATTGAGGCCACTATCAATC
AAAGACCACTATGCTACACAAGTGATGATGAGATTGGGAACACGATCACG
CCTAATCATCTCATGTACGGTCGGCAACTCAATACGACCCCTTCTTTTAA
CGTTTTTAATACTTTAACAACACCTGACGATTGCACCAGACGAGCCCGAC
ATCTTATGAATTTGGTTAAGCACTTTCAAAAATGTTTCAAGAGCACCTAT
TTGAATGAACTTAAACAAAAACATTCATATGATAAGACCAGAACTTCCGA
ACTTAAGTTAACATTGAATGACGTTGTACTTATCAGAGACGATACACCAA
CACCGAGGACGCAATGGAGAATGGGAAAAGTTGAAAGCTTGGTAATTGGA
GCTGATGGAAAGATACGTGGTGCACGTTTGAAAGTCAACACGACGAATGG
TACCTCCACCATCCATCGACCTTTGCAGAAGATCATCCCATTTGAAATTG
CGGACGACACACCCACCGACGATGACCCAGCTGATAATCCTTTAAAGCCT
TCGAGTTCAGGTAGTGCGCGCGGCTATGAGCAAACAGTAAGAAGCAGAAT
ACGCCGGCGAGCTGCGATTGAAGGACAGAACTTACGTCGAGCTAGAGACT
TAGACAGATGATTGGTTGATAGGAATGAAATTGTGTCTGTTGAATTGCAT
GGATTTAGTGATAGCTCGTTGATTTTGTACTGTGGTGTTGTTTATTTAAG
AGTTATCACTAGATCTCATGCTAAAGCTTTCTTTTGGACTTCTAAGACGA
AAGTCGCTCCTTTAAAGAAGACTTCTATTCCTAGACTTGAATTGTTGGCT
TGTTTGCTTCTTACGAAATTGATATCGAATGTTGATGTGGCGTTGTGTGA
ACGACTGAGGATTAATCGTATTGTCTGTTGGTCGGATTCAACTGTTTCGC
TTTGTTGGATTAGAGGTAAAGAGAAGACTTGGAAAGCTTGGGTGGAAAAC
AGGGTTGTTAAGATAAGAAAGGTTGTTTCTAGGGAGTCTTGGTTTCATGT
TGCTGGTACTGAAAATCCTGCCGATGCTCCTACTAGACCTGTTGAGGATT
TCTCTGCTCTTTTTCAAGACAAGTGGCTTTCTGGTCCTTCCTTTCTTTCT
AATCTTGACATTGACTATGACAAAAGACGTGACAATAAAACCGAAATACC
AATTGACGCACAAGTAGAACTTAGACGAACTGACGTTAACGTTATGACTG
TGACTTCAGATAAGAAAGTTAGTCTGAGTGATGTGATCGATTTCTCTCGT
CATGGATCCTTACGTAAGCTTGTAACTGTTGTAGCTTTCGTTCTTCGTTT
CAAAAACAACTTTTTGGCGAAGAAGTACAAACACGATAAAGTGCTAACAG
AACTGACCGCAGAAGAAACTACCAACGCACTTTCCATGATTCTACGCGAT
GAACAAGAACGAATGACGAACCAACCAAACTTTGAGAAGACGAAATCAAA
CTTGAACGTATACAAAGATGACGAAGGATACCACCGTGTCAAGAGTCGAT
TCAACGAGTCTTCGCTACCAACAAAGAAGAATCCCTTACTGCTGCCTGAA
TCAACCGACTTCACGAAATTGCTCATCAAAGATACGCATGAGAAGTGTTT
GCATTTTGGTATTGAAACCACACTTGCCAAAATTCGCGAAAGATATTGGA
TAATTCGTGGAAGAAAAGCTGTCAAGAATGTGCTTCGCAAATGTGTTAGT
TGTAAACGGTTTCAAGGGAGAACGATGAAACCACCGGAATCTCCTGAACT
GCCAGAATTTCGAGTGAACTATAACAACCACCCGTTTTCGTCGACTGGAC
TTGACTTTGCTGGACCCCTCTTTGTAAAGAATAAAGGACTTCCAAGCTCA
AAGGTATACATTTTGCTTTTTACTTGCGCTAGTAGTCGTGCAATCCATCT
TGAACTCACTCCTGACATGAAATCTCCTGCGTTCATACGGGGATTCCAAC
GCTTTGCTTCACGTCGTGGTACACCTGATGAAATCATAAACGACAACGCC
AAGACCTTCAAATCGAAAGAAGTCAAACGTTTGATGACTCGATTGAATGT
TCGGCAACGATTTATTCTGCCTGCTTCTCCATGGTGGGGAGGTTTTTATG
AACGATTGGTTCGCTCCGTCAAGACAGCATTAAAGAAAATTTTGAAAAAG
GCCCTTCTAACCTTTGAAGAGCTACAGACGGTCTTGAGCGAAATTGAGGC
CACTATCAATCAAAGACCACTATGCTACACAAGTGATGATGAGATTGGGA
ACACGATCACGCCTAATCATCTCATGTACGGTCGGCAACTCAATACGACC
CCTTCTTTTAACGTTTTTAATACTTTAACAACACCTGACGATTGCACCAG
ACGAGCCCGACATCTTATGAATTTGGTTAAGCACTTTCAAAAATGTTTCA
AGAGCACCTATTTGAATGAACTTAAACAAAAACATTCATATGATAAGACC
AGAACTTCCGAACTTAAGTTAACATTGAATGACGTTGTACTTATCAGAGA
CGATACACCAACACCGAGGACGCAATGGAGAATGGGAAAAGTTGAAAGCT
TGGTAATTGGAGCTGATGGAAAGATACGTGGTGCACGTTTGAAAGTCAAC
ACGACGAATGGTACCTCCACCATCCATCGACCTTTGCAGAAGATCATCCC
ATTTGAAATTGCGGACGACACACCCACCGACGATGACCCAGCTGATAATC
CTTTAAAGCCTTCGAGTTCAGGTAGTGCGCGCGGCTATGAGCAAACAGTA
AGAAGCAGAATACGCCGGCGAGCTGCGATTGAAGGACAGAACTTACGTCG
AGCTAGAGACTTAGACAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000143_pilon | genome | sc0000143_pilon:280925..283135 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2211:2212 |
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