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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000143_pilon:315696..319522+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038220 ID=XLOC_038220|Name=XLOC_038220|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3827bp|location=Sequence derived from alignment at sc0000143_pilon:315696..319522+ (Clytia hemisphaerica_ch_hm2_pilon)
atgggTGATCAATATGAAGTTACTTTGGATGGCGGTGGCCCATGGGGTAT
CAGACTGCAAGGTGGAAAAGATTTTGGCGTTCCATTGAATGTTGCCAGAG
TACGTTTTTTATTAATACAGAATATTagaattattattttgttttctctg
TTTGAAAAAAGATGAAGACTCTCGACTCTTTATAAAGAGTAGATTATAGT
AGTTATATAAGTTGTAAAATCTCTACAAGTGGTATCTTGGAAAAGTTGAA
TTTATGCATCATTAACGTCACAAATGACAGAAATTAATTTTACTCAAAAT
AAACATTTGGCTAAAgcttcagatgcatccggctggacttagaatttttt
tcaagtttaataGTGACCAAAGGGGGTCTCGAACCAGGAACCTATAGTTT
CCGAAACCAATGCCCTATCCACTAGGCCAAACCGGCTGCTGAAAATTCGT
TATTTGGGGTTACTTATACGAATGTCTTAGTACTATATATAAATAAGTCt
gactgacgagttaggctaactgttatgatcgcCATTACTCCGAAGAAGCC
ACCACACGTGTGCACCACGAAATTTCCACGGTACGAATTTGCGCaattta
attttataaaaaaaatcacctCTAAATTGGTCCTGGCAAAATAGcccatt
ttgtaaacaaaaaattctctcaaccgcaaaattaaattccacgaaacTTT
TGAGCTGTGAACTGCGATATTAGAAAGGTCGAAATCACatatagacaaaa
tattttttcctcccTGACGGCTAAGCAAAAAATTTAGTTTCCACCATCGG
TTCTGACCTTCCTACCATTACTATCTCTAATAAGaggtgtcagaattaga
agaggggtgtcaatattagaccaacttatagCTTACAGGGTGGTTGCTTT
ACCAAAAAATCTATTATCTAAAATGATGATTTACACGTAGGTTTatcatt
gataaaatatttattcctaaattgactttttgttttgtaGTAAGCGGTTa
ccattttgacaaaaattagcAGCTAAAACATTTGTGCTaacataaaaaat
attagaTAATTTTTGCATCAGGATAGGTTGATACCATATCTCTTTTTAAG
CACcaaatttttatcttcattgGTTGCTAAGATTAAGTAATGTTTTTGGA
GTTTCGCCACTAATCTTGAAGTGAGAAATGCCTATCCTATTATATCATCC
TAAATTATGGAAGAATTGACCAATTTGCAATATTTCTTCTGTATATATGG
TATATATCAAATGGCAGAGGCCATAATTAACTTGGTTGTGTCAAATTAAT
TTGGTATCATTAAAACATAATCCAATATAGTTGCTTTTTAAGAGAAAATC
TGATGCATGATTTGACTGTTCTGCCAAGTGCATTCTAAATTTAATAGATT
TATGTTGGGCAACAAAATGGGTGTGtttcaaatacaaaaaaatcaaatta
gttTTGATTGAACATTAATTAGGCCGcaaatgattttttcttcaaataag
cTAAATTTGATGAGAACCAACTTTTCCTTTGAATATGAAAAAGTACTTCC
TGCTAttctgacaaatttttaaaTGGTATATAGTTAATGTTTTTATGTAC
ATTGTTTTTAAATCTAATTTCTATTCTTTTCTCTGAATGACTTAACTATT
AAAATAAGAGTTTCAAAAGACATATTAAGTCCTTGTATCTAAAACAATAA
ATCTCTGTATTAAAGGCTTTAAATTTTTTAGGTCTTCTATAATATTCATT
TGGTTAAAAAGCTCTTTATAAGACATAGCAATAGCATAGTAAAAGTAATA
GCAGGttaaatgaaacaaaattaGGAGTTTAGATTCATCAAAATAATGGT
TAAGATCTCTAAAAGTATATTTTCTGTTTCTGGACAATTCTACCACTAGG
GTGCCTCTCAAAAAGCCTACTGTTTCAAAACCATTTGATTGAATTAATTC
Atgaataattgaaattttaccgacctatttttataaaaagtttttctcat
taAGGAGAGTAAAGAATTTTAATCTTCCCTCTGTTCATTGAGATTGTGTT
CAATGCGGTACTGTGGTCATTAATAAATTATATTTCATTAGCTTTTGTAA
AGAGTACAAAATAGGGATATAACTTTTTTGGTATGTTTTTCATAACAAAT
TTATATTCAAAATTCACCTGCTGTCACTAAAATTTACTGCAGTTTTGAAA
ACACAAATAAACTTGTTTAGACTTATTTTGACAATCATTAGTTGaaaaaa
aGAGGCTGAAATGATGAATCAAATCAAacatgaaaattcaaatttcaaag
aatgGTGTTATAATttagtgccgtaggaagcatttccatattgggggagc
tgaagtttagtgacactgCGAGgaccaaccatggtttggcccgaggggga
aaattttgccccccccagttgctacggcactgtaatttttcagactttcc
aaaagtttttttgactttttatcaAGAACTGCGTCAAAACACAAACAAGT
TGTTATTATAATAAACACAATATTTCAAACATTCGTCAATAATAGCCTTA
GTCACTGTGATAGGAGATTCCAATTCATTGTTGACAGTATTTTGAGAGGG
GTGTGTGTTTATCCTTTATCATAAAATTTGCTTCTAGATTTGTTTCTTAA
TCTGTCCCATAGAGCTGAAATCCATATTGACAGACCTTTATTTAATTGTG
GTTTTTTAGAAGAAACCTCAGATTTGTGGTCTACAGATTTTATCGGAATT
CCTACGTATACCATTGAATAagttttctaaagaaaaaatcagaAGCCTGA
CAttgatcaaaaaaattttttaaatgactaaaacatccaaaatatttatg
catcaaaaactttttaaaattaattccaTACCATCAAATCAATCAATTGT
TAAGGCGTTTTCAAGCAAATCTCATGAACCTCTTATCTTTTGGAACTTTC
CCAAGATATCTTTTTACTTGATGTAGATTGCTTTCTTATCTGGaattaga
aaaaaacacttCAGAAAGAGGGCTCTTAAAGATACAATTGACCAATAACA
AGAAATCTTACCCTTACAAGCACATAAATAGTTATTGGTTCTTAGAATAT
AATATCTGCTGTTTCTCATCTTTTTACCTTCAAGGCACCATTGATAACTA
AACAATGCTTGGTTAAATTTGATATAACTcacaaatcataaaaaaaacaa
aatagccTGAATGTATGCTTTtatgaaacttgaaattttaatttcggTCT
TTTTGTTTTAGGTTACTCCTGGTAGTAAAGCATCAACCAAAGGAATCTTA
GCCGGTGATTCCATTGTCAGCATCAATGGCATTGCTACAAGCACACTTTC
ACACATGGACGCTCAAAACACGATCAAACAATCAGGTTCAACTCTACAGT
TGACAATGAAGTAAGTACTTTCTGGATGTTGTACGCTCAGAAAATTATAA
ACATTTTTGCCTTGTTCAAAGAAAAAGGGGAATCTTTAccacaattttga
ttttttctgcatCCTAACACTGGCAATTGCGATTTCAATGTTATAACACC
TCTTACTCCTACCTCCTGCAGCCTTTATAAAGTGAGAAAttttatggttt
ttttttttgagaatatcaCCTTTGATTTTAAACAATTAATTCTTTCATAT
CTCCtgattttttatagaaaaggtAAAGGAGTCTCACTAGGTGAAGTCAA
ACAAGTCGGATCAGCTGGTTTTGCCGCTGCACCAAGCAAAACATTATATA
CAACCGACGTCACTCATTCAGCTGGAGTTGACCACAAATTTAACGCAAAA
CCGAAAGCTTTTGGTGCAAGTCCCAGT Coding sequence (CDS) from alignment at sc0000143_pilon:315696..319522+ >XLOC_038220 ID=XLOC_038220|Name=XLOC_038220|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=816bp|location=Sequence derived from alignment at sc0000143_pilon:315696..319522+ (Clytia hemisphaerica_ch_hm2_pilon)
atgggTGATCAATATGAAGTTACTTTGGATGGCGGTGGCCCATGGGGTAT
CAGACTGCAAGGTGGAAAAGATTTTGGCGTTCCATTGAATGTTGCCAGAa
tgggTGATCAATATGAAGTTACTTTGGATGGCGGTGGCCCATGGGGTATC
AGACTGCAAGGTGGAAAAGATTTTGGCGTTCCATTGAATGTTGCCAGAGT
TACTCCTGGTAGTAAAGCATCAACCAAAGGAATCTTAGCCGGTGATTCCA
TTGTCAGCATCAATGGCATTGCTACAAGCACACTTTCACACATGGACGCT
CAAAACACGATCAAACAATCAGGTTCAACTCTACAGTTGACAATGAAGTT
ACTCCTGGTAGTAAAGCATCAACCAAAGGAATCTTAGCCGGTGATTCCAT
TGTCAGCATCAATGGCATTGCTACAAGCACACTTTCACACATGGACGCTC
AAAACACGATCAAACAATCAGGTTCAACTCTACAGTTGACAATGAAaaaa
ggtAAAGGAGTCTCACTAGGTGAAGTCAAACAAGTCGGATCAGCTGGTTT
TGCCGCTGCACCAAGCAAAACATTATATACAACCGACGTCACTCATTCAG
CTGGAGTTGACCACAAATTTAACGCAAAACCGAAAGCTTTTGGTGCAAGT
CCCAGTaaaaggtAAAGGAGTCTCACTAGGTGAAGTCAAACAAGTCGGAT
CAGCTGGTTTTGCCGCTGCACCAAGCAAAACATTATATACAACCGACGTC
ACTCATTCAGCTGGAGTTGACCACAAATTTAACGCAAAACCGAAAGCTTT
TGGTGCAAGTCCCAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000143_pilon | genome | sc0000143_pilon:315696..319522 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 250-408:3669 |
| Aaloc | 100-246:3262 |
| Aaloc | 1-99:1 |
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