|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000143_pilon:592773..597669+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038213 ID=XLOC_038213|Name=XLOC_038213|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4897bp|location=Sequence derived from alignment at sc0000143_pilon:592773..597669+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGCGTTCTTTTTTGATTAAGCGAATCGAGGAGAAAATGGTTACTGG
GTATTTCCCTTGGCAGGATGAGACGCTGATGGAAGGATGTTGCTTGAAAT
ATGAAATGGAAGATGAGAGTGACCGCGCGACATTTGATGGAAAAGGAGAT
TCACATACAGgtaatttgaaacattttttctttgcacGAGTGTGTCTTGA
GTTTATCATCAGCCTATTTCATAGAATTCGTGCATATGTCACATTtcatt
ttctattcaatttaaaaGGGGAAAATGCACAAATCTGGTGCACTCACTGG
TAGCcggttttttaaattcaattgtttATACAATTGACTCTGGCTTATTA
GAATTCGAACtggaaatttttatgttttcgaatcaCAGAAATTCAACTTT
ATAGGGGGTAGTTTAAGAAGGTTCCTCCTTCACGGGGACTGAGAGCTAGT
TTGAAGGGGTTAGAGCAACAAGGAGAACtacaggtttttttataaaaatg
ttcaaaatcttttaagccttcggatcaTGGATGTTCTTACCCTTTGAGTT
TTAGGTCAAAACTGTTCTTGAAATAGTTTTGTGTAATAtactaagaaata
gggtgttttagagtccttaaagccttaaaacttgttcttaagattttggt
taccgaagccttatgttcttatacagtttgttcttatataaaacgtGCTA
GTGTGGATTTTTGATTCCTTCAATCGATAAACCTATaaacaatataatga
caaatcaaaaaattaccagaattccacaaaaagaaattaaaaaaacccGT
GTCAACCCATTGAACagttttaattgttttattgTCAAACTTGGAATAAA
CAACACGCATTGGCTTGCTTTCAAagacttttctttttcgtttcgCTCTC
TCGTTTACGTtggaattgacgtcaaaagacaTGAAGCCAATTACGTTAAC
GACTTTTTTGTTGACAAGTTTCTTCGAAATTAGCATTCAATTATCAttag
aaatgtttttcaaataagAATAGAAAACTCGTTAAAATGGTAATCCATCG
TTAATTTCTAATGGTATGCCTATCCAATCCTTCGCAACCGAGAGTCATGT
GATACACTTTTCGACCAATGAGATCAATTTTTCAATGGGAAAACAAACTA
CTTTGAGTTAAGCAATAGTGACTGATCTGTTTTCATCTAGTTCTGAGgcc
attttaattattttaaattgaTAAATAAAGTCGTTAAAATTGTCTATCTA
CCCTTCGCACTGAACGTCATGCGATAGCATACACTTATTTACAACCAATG
GCGCACCACACTAaacctaaaaatatattttattttgtcataatcattac
tctcgatgtgtttgtacgagttccaatcccatcaacctttgcgttaatct
cttttgcacgttaattgcatcatttgacaaaagatatattacagcttgca
cgtatctttaattatTAAGCCGCGTTAAATTGTGGGGtcgcaactcgtac
aaatgtcaaaaaagtgaaaagtgatAATTATGACGTGTGCGTTGTGGAGC
GCTATTAGATTTAATTTTTGGAGGGAAACACAAGCCCTGTGGGTtaactt
tctaaaaaatttagttTATCAAATTCACATATACAATACTTtctttacac
gcttttttttttataagaatggtgtaaatccatttcatcatggatattct
taacttttttgggaaaatcatcctaaaatattcttacagcattcttatta
cttgggggtaattggcaatttataatttaaaatgctctaaaaatgacatt
ctttgctcgaatagcaaaattccatgatggtgatattcttagcatattct
tgattttttggccattttcatcatggacattcttataaaatgtattctta
taaaaaaaaaagcatgtagTGACCTAAACCAAAGTTCACTGTATTCCTTC
GATTTTGAAGTAATGCCGAGGTCATGAAATCATAGATGGGTATCTCCACA
ATACACactgaaaagtgaatttttgaaatttcgaaagtttttaAAGGTGT
AGAAGTAGATCTCTTCCCAGGTTTTCCAAAAGTTCAGAAACTTTcacaat
gaaaagaaaaatcgatGATTAAAACATTATTACAGTTCAGCGGCTTGGGC
GATACACgttttgtcaaaaaatataagaacattcgATTCAGAATCCCGAA
TTAAGACACATGTAAATTCAAAGAGAACACCTCTGTCCCGATGGAGCTTT
CTTACCACAGTGGGAATGAAAATCTCTATCGAAATTCCAATACGGATAGA
CACtctattcttcttcttctcagGTCCAACTAaagttttgtttgaaattt
tggttttggagtgcattcgCACGTTAAAAGTTTagattttctaataaaaa
aacaacaccaTAAAGCAATTAAAGCATTCTTTTGTATTCCGTGCCAGACA
CGACCAGGGCGGGGCGTTCGAAACCACGAAGACGCCACATGGTCAATCAA
AAAGAGTAATTTGTTACTCTTTTATGAGAGAGATTTTATAACCATACTTT
TGgatttcattttctaaaaatgtccTTAAATGTTCTTGTCTTCGGCATTT
TTGGTGTAACTTTCATGAGGGATTGCATATCTTAGAGTTTTTGAATTCCA
TAAAACCGTTGGCTTGCACTGAAGACTTATATTCTTATATGGAAAAGAGT
CAATCGTTACACAACTTTGCTTCGACTAATGATAGCCTTTGTATGCTCCG
CCCTACCTTGTAAAGATAGTTTCGAAGCTAAACTGGTCTCAACTTTTTGT
TTACAGACTGTTTCTATGGTGATGAGAcatacaaaaaattgaaaaaagta
tgTTTGGGAAAAGTCATTGAGCTTAGCCAAAGGCTAAAGACGAATCTTTT
AACCTCTTTCTCtctcaaaaaaaagtgaaagccTTGGAATTTGCGTTTTA
TTTCGGATggcggattgaatctagcacctTCATTGATTTCTGGCCTTAGA
TTTTTTAATCTTCTACCGGAATTTGTAACTTTCAATCTTGTATCTGGATG
AGAACCACGCGGGCCGCGCAACCAATGTAGAAAATGATAGGTTCCAAATC
CTACATAGCAGTTTCGTCTTTAGCATTTCGCGATACCCTATTGGGAAAAC
TCGAATACGTTTCAATTAATTAATTGTAAtataatacagggtgtcccgaa
aaaaagtatcgagctCGAACacgattctgagtagaaggttatcgcgtgtg
tttaacaaaatgtaagaaaatatataccaacacaattattgtttttacaa
caatcgttttgattaaaaataattaactctctttacaattttcagaacgt
taaagttattgagaattgttttttgtaaaacttATTAAactcataaaaga
tgtctcatgacaattaatatgacacagagagaaactttgataaacattgc
aaatttcatagtgaaacacacacaaaaactttctttctatagaagtgttA
AGACTCgatattttttttcgggacaccctgcaCACATGAATCaaacaaac
taaagaactctttttgaaaattaaaagtttcaaaagaaaaaaggcTTTTA
GCCGCCTCAATTTATAAAACTCGCGGCTTAGGAGGAGGATGAGGATTTAG
CACAACAAATACCAAAACTAGTTGTTTGAAATTAATAACATTAGGGCAAA
CATCTTTCTACTAGAAAATCTTTACCGATCACGGAAATGTACACTCTTAC
ATAGTACACAGATTGTATTTCCACCATTATGGAAATATACGCGTTCGAAT
CTGTAGAAGTGATTCCTTAcgtaaatcgaaaaaaaaaaaacaatataaat
GCCCAGGCAACAATATTTCCATGTGTTTAATATAGGGAAAATATTTACCG
GTAACGGAAATGTAACTgtcttacaaagattgtttctAAATACGGAAGCC
TTAATTGATTTTTCCACATGAAATTACATAGACAAACCACATTTGATTGT
AATGTATATTGCATCTTTGTAGCATTTACATAATCCATTCTAAAATCAAC
TTTCTCTTTTCCCTTCTCAGGATCAGACAGCGGTATAACCTCAACATCGT
CACCTTTTGAGATTCAAATCCTGACACCCTTTTGTTCAGGAATGTCCCCT
CCAACAATATTGGTATCATCGTGCTGTGATAAAGACCATGGTGACATTGG
TTCCCTCTCACCTGCATCTAGCTGCCACCATGAGGGATCAAGCCCGTTCT
TCTCTCGGTCTAGCTCCAGTCAGGATGGATTAGGCTCGATCTCACCTGAA
TCTAACCATGACAGAGATTTACCGAGATCTTTCCTATCCACACATAGCTA
CAACCATATGGTAGCATGCTCGCTCTCACCTGCTTCAAGCTATCACCACG
AGGATGAAATGATACCATCCCCTCCCGGgccacaacaacaaaaaatcaac
gaaaatcATGTGGAACTATTATCCTCAACGAAAAGGTACGGTAGCCTCCT
TCCTTCTTCAAGATTGAGCTACCTACCACCTTGGCAAGTGACCTCCTCAG
ATGAGATAAAAAAGCACCAATGTGAATACTGTCTTAAATGGTTCCAAAGA
TCAAGTAGTTTATCAAATCACCGATTAATCCATAAGAACTCCAAATCATA
CAAGTGCAACCAATGCAATATGAGCTTTCTTCGTAAGTCTGACCTTGGTA
AACACATGGTCACACATTCCGGATCAAAACCGTATCAGTGTAACGTTTGT
GGTAAACGCTTTTCACAATCTTCGAATATGCTGACTCATCAAAGACGCCA
TACCGGGATCCGTCCGTATTCTTGTGGTGTATGCGGGAAAGCTTTTTATC
GGAAAGTCGATGTAAGGAGACATGCTTCAGTTCATAGGGGTTattga Coding sequence (CDS) from alignment at sc0000143_pilon:592773..597669+ >XLOC_038213 ID=XLOC_038213|Name=XLOC_038213|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1974bp|location=Sequence derived from alignment at sc0000143_pilon:592773..597669+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGCGTTCTTTTTTGATTAAGCGAATCGAGGAGAAAATGGTTACTGG
GTATTTCCCTTGGCAGGATGAGACGCTGATGGAAGGATGTTGCTTGAAAT
ATGAAATGGAAGATGAGAGTGACCGCGCGACATTTGATGGAAAAGGAGAT
TCACATACAGATGCCGCGTTCTTTTTTGATTAAGCGAATCGAGGAGAAAA
TGGTTACTGGGTATTTCCCTTGGCAGGATGAGACGCTGATGGAAGGATGT
TGCTTGAAATATGAAATGGAAGATGAGAGTGACCGCGCGACATTTGATGG
AAAAGGAGATTCACATACAGGATCAGACAGCGGTATAACCTCAACATCGT
CACCTTTTGAGATTCAAATCCTGACACCCTTTTGTTCAGGAATGTCCCCT
CCAACAATATTGGTATCATCGTGCTGTGATAAAGACCATGGTGACATTGG
TTCCCTCTCACCTGCATCTAGCTGCCACCATGAGGGATCAAGCCCGTTCT
TCTCTCGGTCTAGCTCCAGTCAGGATGGATTAGGCTCGATCTCACCTGAA
TCTAACCATGACAGAGATTTACCGAGATCTTTCCTATCCACACATAGCTA
CAACCATATGGTAGCATGCTCGCTCTCACCTGCTTCAAGCTATCACCACG
AGGATGAAATGATACCATCCCCTCCCGGgccacaacaacaaaaaatcaac
gaaaatcATGTGGAACTATTATCCTCAACGAAAAGGTACGGTAGCCTCCT
TCCTTCTTCAAGATTGAGCTACCTACCACCTTGGCAAGTGACCTCCTCAG
ATGAGATAAAAAAGCACCAATGTGAATACTGTCTTAAATGGTTCCAAAGA
TCAAGTAGTTTATCAAATCACCGATTAATCCATAAGAACTCCAAATCATA
CAAGTGCAACCAATGCAATATGAGCTTTCTTCGTAAGTCTGACCTTGGTA
AACACATGGTCACACATTCCGGATCAAAACCGTATCAGTGTAACGTTTGT
GGTAAACGCTTTTCACAATCTTCGAATATGCTGACTCATCAAAGACGCCA
TACCGGGATCCGTCCGTATTCTTGTGGTGTATGCGGGAAAGCTTTTTATC
GGAAAGTCGATGTAAGGAGACATGCTTCAGTTCATAGGGGTTattgaGAT
CAGACAGCGGTATAACCTCAACATCGTCACCTTTTGAGATTCAAATCCTG
ACACCCTTTTGTTCAGGAATGTCCCCTCCAACAATATTGGTATCATCGTG
CTGTGATAAAGACCATGGTGACATTGGTTCCCTCTCACCTGCATCTAGCT
GCCACCATGAGGGATCAAGCCCGTTCTTCTCTCGGTCTAGCTCCAGTCAG
GATGGATTAGGCTCGATCTCACCTGAATCTAACCATGACAGAGATTTACC
GAGATCTTTCCTATCCACACATAGCTACAACCATATGGTAGCATGCTCGC
TCTCACCTGCTTCAAGCTATCACCACGAGGATGAAATGATACCATCCCCT
CCCGGgccacaacaacaaaaaatcaacgaaaatcATGTGGAACTATTATC
CTCAACGAAAAGGTACGGTAGCCTCCTTCCTTCTTCAAGATTGAGCTACC
TACCACCTTGGCAAGTGACCTCCTCAGATGAGATAAAAAAGCACCAATGT
GAATACTGTCTTAAATGGTTCCAAAGATCAAGTAGTTTATCAAATCACCG
ATTAATCCATAAGAACTCCAAATCATACAAGTGCAACCAATGCAATATGA
GCTTTCTTCGTAAGTCTGACCTTGGTAAACACATGGTCACACATTCCGGA
TCAAAACCGTATCAGTGTAACGTTTGTGGTAAACGCTTTTCACAATCTTC
GAATATGCTGACTCATCAAAGACGCCATACCGGGATCCGTCCGTATTCTT
GTGGTGTATGCGGGAAAGCTTTTTATCGGAAAGTCGATGTAAGGAGACAT
GCTTCAGTTCATAGGGGTTattga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000143_pilon | genome | sc0000143_pilon:592773..597669 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 163-987:4073 |
| Aaloc | 1-159:1 |
|
