XLOC_038117 (mRNA) -

Overview
NameXLOC_038117
Unique NameXLOC_038117
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000121_pilon:950298..951110-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038117 ID=XLOC_038117|Name=XLOC_038117|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=813bp|location=Sequence derived from alignment at sc0000121_pilon:950298..951110- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTCTACACCTCACGTCCCAAGTAAAAATGCTGATATAATTGAATT GTCAGATTCATGCGTTCCAGCTGCTATTTTATCCTATGATGAAACCATTG TATACAAGATATTTGGCAATGACAGTCGAAAAGAAGTGAAAGACACAACA CAAGCGCCATATCAATGGGTTTGCCGATTATCAATGACGTTTTCTGGCAA GAATTACGTTGGAACCGGTTGGCTATGCTCTACTAATAGCAGCAAATACG ACGTCGTTGTAACTTCAGGACATTGTGTCTATGAAACTTCAACTGGAAAG TTTGCAGAATCAGTCACTGTTGTCCCTGGAGCCGACGGTAAATATGCACC CTGGGGAGCTTTTACTGTGGGCCCCTCTAACTTGAGGGCTTCCGCAGGAT GGAAAGCAGCAGGTCCAAATAAATCCGATTTTGATTATGGAGCAATTCTT ATCCCCAAAACAAATTGTTTAGGAGCATGTGCAATGTGGGTAGACAAGTC TCCGGTAAACAAACAAGCCTTAATTTCCGGGTATCCTGGAAGTAATCCTT CAAATGCCCCATATGGTTACAATTGGGATAAACAAGGCCCTATAGAATCA GCCGATTCTAATACCCTTTTCTACACCATCGATACATCTGGTGGTCAAAG TGGAAGTCCTGTTTTCGCTTTAAAAGCTGGTTCGAATTTTGGTCATGATA ATTATATCAACATATACTCCATTGGTATCCATTGGGGTTACATAGGAAAC TCCAATGCTGCGATGAGGATGACCAGCGCTGTCTTTAATGATGTCATCGA ATGGAGTAAATAA

Coding sequence (CDS) from alignment at sc0000121_pilon:950298..951110-

>XLOC_038117 ID=XLOC_038117|Name=XLOC_038117|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1626bp|location=Sequence derived from alignment at sc0000121_pilon:950298..951110- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTCTACACCTCACGTCCCAAGTAAAAATGCTGATATAATTGAATT
GTCAGATTCATGCGTTCCAGCTGCTATTTTATCCTATGATGAAACCATTG
TATACAAGATATTTGGCAATGACAGTCGAAAAGAAGTGAAAGACACAACA
CAAGCGCCATATCAATGGGTTTGCCGATTATCAATGACGTTTTCTGGCAA
GAATTACGTTGGAACCGGTTGGCTATGCTCTACTAATAGCAGCAAATACG
ACGTCGTTGTAACTTCAGGACATTGTGTCTATGAAACTTCAACTGGAAAG
TTTGCAGAATCAGTCACTGTTGTCCCTGGAGCCGACGGTAAATATGCACC
CTGGGGAGCTTTTACTGTGGGCCCCTCTAACTTGAGGGCTTCCGCAGGAT
GGAAAGCAGCAGGTCCAAATAAATCCGATTTTGATTATGGAGCAATTCTT
ATCCCCAAAACAAATTGTTTAGGAGCATGTGCAATGTGGGTAGACAAGTC
TCCGGTAAACAAACAAGCCTTAATTTCCGGGTATCCTGGAAGTAATCCTT
CAAATGCCCCATATGGTTACAATTGGGATAAACAAGGCCCTATAGAATCA
GCCGATTCTAATACCCTTTTCTACACCATCGATACATCTGGTGGTCAAAG
TGGAAGTCCTGTTTTCGCTTTAAAAGCTGGTTCGAATTTTGGTCATGATA
ATTATATCAACATATACTCCATTGGTATCCATTGGGGTTACATAGGAAAC
TCCAATGCTGCGATGAGGATGACCAGCGCTGTCTTTAATGATGTCATCGA
ATGGAGTAAATAAATGGAGTCTACACCTCACGTCCCAAGTAAAAATGCTG
ATATAATTGAATTGTCAGATTCATGCGTTCCAGCTGCTATTTTATCCTAT
GATGAAACCATTGTATACAAGATATTTGGCAATGACAGTCGAAAAGAAGT
GAAAGACACAACACAAGCGCCATATCAATGGGTTTGCCGATTATCAATGA
CGTTTTCTGGCAAGAATTACGTTGGAACCGGTTGGCTATGCTCTACTAAT
AGCAGCAAATACGACGTCGTTGTAACTTCAGGACATTGTGTCTATGAAAC
TTCAACTGGAAAGTTTGCAGAATCAGTCACTGTTGTCCCTGGAGCCGACG
GTAAATATGCACCCTGGGGAGCTTTTACTGTGGGCCCCTCTAACTTGAGG
GCTTCCGCAGGATGGAAAGCAGCAGGTCCAAATAAATCCGATTTTGATTA
TGGAGCAATTCTTATCCCCAAAACAAATTGTTTAGGAGCATGTGCAATGT
GGGTAGACAAGTCTCCGGTAAACAAACAAGCCTTAATTTCCGGGTATCCT
GGAAGTAATCCTTCAAATGCCCCATATGGTTACAATTGGGATAAACAAGG
CCCTATAGAATCAGCCGATTCTAATACCCTTTTCTACACCATCGATACAT
CTGGTGGTCAAAGTGGAAGTCCTGTTTTCGCTTTAAAAGCTGGTTCGAAT
TTTGGTCATGATAATTATATCAACATATACTCCATTGGTATCCATTGGGG
TTACATAGGAAACTCCAATGCTGCGATGAGGATGACCAGCGCTGTCTTTA
ATGATGTCATCGAATGGAGTAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038117XLOC_038117-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121_pilongenomesc0000121_pilon:950298..951110 -
Properties
Property NameValue
Aaloc667-804:139
Aaloc1-666:814