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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000121_pilon:840789..849096+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038115 ID=XLOC_038115|Name=XLOC_038115|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8308bp|location=Sequence derived from alignment at sc0000121_pilon:840789..849096+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGGTCCTATGTCtccaaagaaagaaaagtctgATCCTTTATCACC
TGCAGTATCAACAGAACCAAAGAATGTGCAAGATCTCACTGTATTTGTAA
GTTTATATACATGTTTTGTGGCGAGGAGGTTGCAACTTAACttttccatt
tctatcttctatttttcactttgtttatgttttttttatcttcccACAAG
CTCTAGAATTTCTAAAGGGCTAATCAAAGCTTACTTGAGATCTATATGtt
cagacggtgtcaatcaataaacaacttcgaacaaaaatcgcaattgaacg
taatcgaacgcgatcgaataattgcgagcGAATATTCGATTcgaatcgaa
tctcaatcgaaccagtctggaaagaagggaaatgttacgccggagctgcg
ccaacttaactggaaaaagttgaaggcagcagatctcaaatctcaaatct
acgccggagatatccggcgcacaagccgcaatttccagactggcAATCAA
ACTgtttgagtaaggttagatagaccttttttcaaagaggacgtcctgtt
gaataattatgtagtccagccataaaaacaatgatagagccatgcataat
tactgtatcatgcatattgtaataattatgcatggttttatcattgtttt
tctgctggactacataattattcaacagggcggcctctttgaaaaaaggt
ctattggttcgattgatagttgactatgttcaattctggtttgattggtt
tgattaatTGTCAATTACCGTGAGATTGTGGCtgagtaacttgcatcagt
ggaggctaacatgcatagccctcaaataaatgacctggctggtcattaaa
atacaaAGTTAAATCAAAACAAAAATGGTAGAGTAGAGCTGCGAGCGGAG
CTGCGTAGttgtattttaatgaccagccaggtcatttatttgagggctat
gcatgttagcctccactgatgcaagttacctaaGTTACCGAAGTAAGTAT
CACCTTTTCACCTTTCCATCCGcaatcttgaattgtatgcaaaaatagag
gaaggaaaaagctgtggttggcatgccattaaaaaaattccacaaagagg
gagtacacacatcaaactttcaaaacacgcaaactgaaagcagtaattat
gacatcacacataatcaatgttttgatttgatcatttggcggctctattc
ccaggagaataatttgccgtcagtcgaataaggattgttttttcaccttt
gctagtaatttttcagcttgagtttaatTTCTAAAAGAGATGatgaatat
aattatttttagcttttaagactaaagagaagcaaatttaatctttcttc
tacaattcaatatggtggatggaaaggcgaaaaggtctattgatttttct
ggtgaaaatttctttgccaCGAAAGAACGTCAACAAATTATACCCCTAcc
cccccTAAACGTCCATTTTCCACGGCAAGTCTGAGTTTGGAAGGCTCCCC
TTACAGCCCCTTGGATATGAAACAACCTAGCCTAGGAAACACTTTGTGAA
AGCTAAAAGATTTTGTGTCTGCACCAAAAAGTGCAAAACTTCAATTTCTA
Ttcatttatttgcataagcctaaaaagctaaaatcaaaaatatttaacaa
aaacttgtctataaaaataaaaagtatataaaaaaggaagttaagaatat
tatacaataataaatagtaataaatagtaaaaaagtagaaaatagtaaaa
CATACAAAGACCTCTGAGGTATCTGCCAAGCAAACAACTATCAGAGAAGC
TATTAGGGATGCATGGCGTGTAGAAGAAGcagaagaaaatgacaaaatca
aAAGATCTCGCAACGTCGTCATCCATGGCTTAgcagaacaagaacaagaa
gatGACAGTTCATGGGCCGAAGGTCTTGTTAAAGACACTCACACACTCGC
TACTATCAAACGTGTCAGTCGCCTCGGAAAACCATCCCAGGAAAAGAAGC
GCCCTTTATTAATCTGTCTATCTagcgaaaaggaaaaattttcacttcTC
GGAAACCTTCCTTCTCTCAAGGGCATCCAAAAATACAAGACAACGAGTAT
AACTGAAGATCTAACACCAGATGAAAGAAAGAACGTAAGGGAACTATCGT
TCAAAGCTAAAACTAGAAATGAGAATGATAACTCTGATATCTATAAATGG
AGAGTTCGAGGGGACTCAAAAAACGGATTCGACATCATCAAGGTCAAAAT
CAGATCCCAAACAAAGAAGACAGACACGAAGAATGTAGTATTCGCCAAGA
ATCTTGCTCAAACGAAAACAATCGGAGAACAATAATTCAAGAAAACCATA
ACGTAAATCAAGTAGATGATGTTGAAATAAAGATCAACGAAATCAGGATC
TTTTATTGCAACGCCGACACGCTAACACCTGAGAAGAAGCGACAACTGGT
GCTTGATGTAGAGAAACATCATCCCCACATCATTGCGATATGTGAGGTGA
AACCAAAGCACGGTGGACTGCGAGAGCTACACGAACACGAGCTTAAACAT
TATAAATGTGTCAGTCATACGAACATGACCACTGGCATCGGTCGCGGGAT
AATTATTCTTGCTCATTCATCGATCAAACATTTGGTCACCGATGTCAACC
AATCAATGAACCAAGTCAATTTCAATGAAGTATCCACAATCGAAATTCGT
CTATCCGGAAACGATCTCCTGGTCTTCTCCTGTATCTATCGCTCCCCTAC
GAACAATGACACGTCagctgaaaataacaacaagttGAATCATCTAATCA
AAGATATCGCATCAAACAACAAATACTCTCATAAATGCTTTGTCGGGGAC
TTTAACTTCCCAACAatcaattggaaaaattggacgaCGCCACATCTCGA
ggaaagtaaagaagaaaaatttcttgatgcCCTTCGCGACTCCTTTCTCC
ACCAAAGTGTAGAAGAACCAACCAGGTGCCGTGGGACTGACGACCCATCT
TTAGTCGATCTCATTCTAACAGGTGAAGCTAACCAAGCTCTATGTCTAGA
GTATCTCAGTCCTTTGTGTTTAAGCGATCATAGTTGCTTGACCTTCACTA
TCAAATGTGATGCTGTATTGAAACCTAAATCAGAAAGATACAAGTACGAG
GACGCAgactttgaagcaatgaaacaaGATCTCAACTCTGATGATTGGTA
CAAGCAATTCCCGGAGATGGCTGATTCTAAGTCAACCGAGGAGCTTTGGC
AGCTTTTCCGAAAGAAGATTTTGGATATACGAAACCGTTTTGTACCCATA
AAGATCATCGGTGGTCAAAACTGGAAGAAGAAAGGTAAAATACCTATTGG
AGTTCAACTTCGGAAAGAAATAGCAGAGAAGAGACGCCTCCATCGgaaat
ggatgaaatcatcgcccgaagaaaaagaatacaatcgagcaaaatacacc
cctgtaagAAACAGAGTGAGCAAATTGATGAGACAAGCTCACAGGAACTA
CGAACAAAGAATTTGTGATAACGCAAAAACCAAACCGAAGATCTTCTGGT
CACATGTGCGTAACAAGATGAAATCTTCTAGTACAGTTTCATCACTACTT
GAATCACCAAATGTCAAAACCTCGTTAAAGCATGAAGATCACGAAAAAGC
TAATATACTTCAACGACAGTTCTGCAgtgtattcacaaaagaagCAGTAG
GTGAGCTTCCTGCATTTGAAAAGAGAACTGATTCATCCATCAGAGATATT
CATATCTCTGAGGAGATGGTACAGAATCGATTGAAAGAGCTCAACCATAA
TAAGTCATTCGGTCCAGACGAAATACACCCTAGGATACTAGCGGAATTAT
CTGACTATCTGTCTCTACCCTTGGCTGTAATCATGAACAAATCTTTAGTT
GAAGGCTCATTACCACAAGATTGGAAGGTGGCACATGTCACACCTATTTA
CAAAAACAAGGGACCTCAGAATTTGGCAGTCAATTATCGACCTGTTAGTT
TGACATCAGTAGTGTGCAAATTAATGGAATCAATACTGAGGAAACATATC
ATGAAGCACCTTTCTGATCataatcttttatcgaacaaacAATATGGCTT
CATTAACAACCGTTCAACCGTGACACAGCTTTTGTACTATCTGGATAAAT
GTTATGAGAGCATCTCTAAAGGAAACGTTGTTGATAGTGTCTACTTCGAT
TTTGCGAAGGCTTTCGACACTGTACCCCACCGTCGACTATGCAAGAAACT
ATCAGCATATGGCATCAACGGTTCAATCTTAAAATGGATAACGTCATTTC
TAACAGGTCGAACTCAATcagtaaaagtgaaccagtcctTCTCGACTACA
GACCCTGTAGTGAGTGGTATTCCACAGGGTAGTGTACTGGGACCAATGCT
GTTCGTGctatacatcaatgatcttcctgaaaaggtcatctcattgatcc
tactgtttgctgatgataccaaaatcttcaaagaagtcaATTGCATCGAA
GACTCTGTTTCCCTTCAGAATGATATAGACACACTTGTAGAATGGTCGAA
AGACTGGCTATTACTATTCCATCCTGAAAAGTGTCACGTTCTGACGCTAG
GAAAGTTTGGAAACATCAAACATGCTCATCCATATTCCCTAGATGGACGC
CAATTGGAACacgtctttgaagaaaaagatcttggaatcctcattgactc
agaacttacatttgaagaacacattgcaaagcaagtcaaaaaagcaaacg
cgatacttggcataatcaatcgaggatttgtaaatatgagtacaagtaca
tttaaaacattgtattgtgcgtttgttcgcccgcatctggagtacgctca
gtcagtatggtctccgtttctacgtaaacacgtaaatctgattgaaggag
tacaaagacgggcaacaaaacttgttcaaaaatgtcgtgatatgtcttat
gaagaacgattgcgtgaattagatcttcctacgctcgagtttagaagaca
cttttgtgacatggtccaactttacaagcacatcaactattacgaaaaag
ataccatcccaaacaagatagcccgtcgaacgcgaccaaacagaaggcac
aactttgagatgattccaaactttggaagcgatggactccgtggtgtaca
aacgaattccttcttttatcgaactataccaacctggaataaattgccaa
aagatgtcgctgaggcaaagacagtcaaagtcttcaaagaaagactcaac
actgcatggagtaaacacccgaaaagattcaacacaagacaattgtaaaa
tacgtataatcacgatcagttccagaggccctcgtgcgcctagaactttg
ttacattataataataataataatattgaataaatagtttattaGTTGAC
TGACCCTCTGGACACGTGTTTTGACCCTGCTAAAGCATCAAATTGAACCA
TAGGGCACTAAAATTTACCCCTGCACATTTCAATTTTATCCCACGGATAT
GAGCAGTTTTTCATGACTTTTCAAATAAATACCCCTGGACAGTAAATATA
TCTTCCACCATGTACAGTCTTTTTCTGGAGGTGAGCTCCCTTAAATGTCT
ATTACCTTCATGAGACTAATTTCGAGGAGAAATAACTGAGTGTTTTAGCA
GGCAAAATTTAAGgattattttagaaaatgatGGAAAAACTTAATAAGAT
GAGTaataacttattttggcaaggcagcatttttgttatttttggtaaga
aataattttcaaattcaccaaaataagCCAAAGGGTAATCAACATATcaa
atatattatttattttttaggttGAAAACTTGCTGAGCACAATGGTAATT
GATTATTACTACAATTTCATCTCTCTGCCATGCCTCCTTGCTACTGTTGG
GAATCCATtgacttaaaaaaatatttctaagtCTCAATTAAAGCCTAGAA
TTAGTGCAATTGAATCTTTGGCatgaaattaaagaaataatGCAAGTTAT
TCCTGGTTACTTACTCaattacttttttgctttttggcctttgtgtatgg
cgcgccaaaagggtttttaataaaaaactttttttttcgatagcaacttt
tttcttgatgtcaacttttttttagatatcaactttttAATGTCTCTATT
TACTCGATTTCATTATTTTGCAATGTTGACAGAGGCTTACAACACGCATG
CGCAAAAATGCATTGCGCGCGTGTTTGATCGTAAAATTGTCAACAACATG
CATCTCTTGATGCTCTACGGATTCCACGCATGCGCTTCCGCACCATCTCC
TTCGTTCTTGTATTTTATTAAGGGTCCCTTTACACTAATGGTTCTCATTG
AGGCAAAAGTTTGTATTGTACAACTttggtattataataaaaatgcTGGT
GTTaaaaagaagttggtattcaaaaaaaaaagttggtattcaaaaaaaaa
agttggtattaaaaaaaaagttggtatcgaaattaaaaagttggtattga
aaaaaaaagttggtattgaaaaaaaaagttggtgtcgaaaaaaaaagttg
gtattgaaaaaaaagttgttatATAAACCTTTTTGGCGCGCCATATTTGT
GCAGCTTCTTTTTATACATTTCTTTGCTCACAAATATTTCATggattatt
tctattttgtttcattttagcAAGATAAATTTCAAGCTATGTCGGATCAA
ATATTGACAAGaaatatcattttcatcattttgcttCTACTTACAACGTC
GTAAAATCATGACTTCTTCTAGAGTTTTAAAACATCTGGGGAAGAATGTC
CCTGGTTTTTCCCCAAAGCACACCCTTTTTAAAATTCCCTTTTTTGATGG
CATATCTTTGACCAATTTAAACACTTCCAGCAGATAAAGTATTTTTCTAC
TTTAAAGAAGTGGTCTGGCAACACCACACCCTGTATTTGTCTGACAACAA
ACCTTTCTtcaggacaccctgtatttGTGTTAAGCTTAAGTTAGTGTTTT
TACGGGGTCATAaatatattttgtcaaaattgaagAATAGTAGTTTCAAA
AGCTAAATAGAAGATCTAATCGGAATAGCGAATAAGaaggaaaatattga
aatatatgTTTATGTAAAACCAATCTAAGAATCACATGTTTTCTTTAACT
GATATGTTTACTGGACGACATGGGTGGACGAATTGACGAACTGGAAAAGA
ACATAGGTGATCTTATGCAACAAGCTGGCATCGAAGATGAACCtgctaaa
aagtaaacaaacaaaaacatttaacTAAATGGGATGGAACCACGAAACTT
TACATACAGTTTTTGTTGTTCATATTTTTATACCTAACTAAAAACGGGGG
ATTTTTAAATGCGAAACATGGTCAAATAGAAATTGTCGATGGATTGGGAT
TTTTTCTTGCCAGTTGAAACTTATTTTAGGTTGTTTGAATTAATTTATAG
atcctattgttattttttatataaatattatACATAATATGTAAGTAACT
GATCGAAACATTAAATAATAGTGCCACTCTTTGACTTTTATAACAGACCC
CATTATTTGAACTTTCCGAACCACTTTTCTGCTTTgcacaatttttcaaa
aacataagGTTGAGTAAGTTCGAGTAATCTGCCGAATTTATTTACTCGAA
CTTTGGATTCCAATGTATGTTAAAAGTTCAAGTAATGTTCGAGTAAGTTG
GGGTTCTAGTAATTTGTTAACTCAAACTTTACTAGAATTAGTATAATCAA
AAGGAAATTTCTtatatttaagtttttaaagCTATCGGTTAGCAAATTAC
AGAAACACTCAAAATATATTTAGCTATCTTTTCAATTGTTAATTTGGCCA
ATTGTAACTTTTCTTTAGATATGTTTTTATAATATCGAATGAATATCTAT
ATCGTACTTCAAATATTCACTTTCAGTTTAACTTTCCTATATATTTTACA
TCTATTTCGTGCGTAATGTAAGGATTTAAAGACATTtaacttaaaaagtt
ttgaaaacaaaaatttcggCAGTTTCAGGTAATTTCGATGATTGATAAAA
TTATCACAAGAATAGAACAATTAATGAATCTACTGTTTGGATGTAAATTT
TCGTACAGGTACCATTTTATTACAAAGCATATTTTCTAAATACCGTTGCT
ATGATACTTAGACTAGAATCGACTGGTCGAATGGGGTTGATTTTCAGTTA
ACCTTCAGATCAACACAATAAATCTATATTCAACTtcatgaagaaaattt
ttgcgtttttaggttgttgtttttatccgaggttactagctcttatttga
ttattttt Coding sequence (CDS) from alignment at sc0000121_pilon:840789..849096+ >XLOC_038115 ID=XLOC_038115|Name=XLOC_038115|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=600bp|location=Sequence derived from alignment at sc0000121_pilon:840789..849096+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGGTCCTATGTCtccaaagaaagaaaagtctgATCCTTTATCACC
TGCAGTATCAACAGAACCAAAGAATGTGCAAGATCTCACTGTATTTATGG
ATGGTCCTATGTCtccaaagaaagaaaagtctgATCCTTTATCACCTGCA
GTATCAACAGAACCAAAGAATGTGCAAGATCTCACTGTATTTgttGAAAA
CTTGCTGAGCACAATGgttGAAAACTTGCTGAGCACAATGcAAGATAAAT
TTCAAGCTATGTCGGATCAAATATTGACAAGaaatcAAGATAAATTTCAA
GCTATGTCGGATCAAATATTGACAAGaaatGACGACATGGGTGGACGAAT
TGACGAACTGGAAAAGAACATAGGTGATCTTATGCAACAAGCTGGCATCG
AAGATGAACCtgctaaaaaGACGACATGGGTGGACGAATTGACGAACTGG
AAAAGAACATAGGTGATCTTATGCAACAAGCTGGCATCGAAGATGAACCt
gctaaaaagttgttgtttttatccgaggttactagctcttatttgattat
ttttgttgttgtttttatccgaggttactagctcttatttgattattttt
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121_pilon | genome | sc0000121_pilon:840789..849096 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 256-300:8264 |
| Aaloc | 166-252:7164 |
| Aaloc | 121-165:6671 |
| Aaloc | 97-120:5821 |
| Aaloc | 1-96:1 |
|
