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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000121_pilon:931079..934999+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038111 ID=XLOC_038111|Name=XLOC_038111|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3921bp|location=Sequence derived from alignment at sc0000121_pilon:931079..934999+ (Clytia hemisphaerica_ch_hm2_pilon)
cAGACATCAAAAGGTTTTGGTTTAACCTACCCACCACGACGCACATCCCG
AATCGGAACCACCTCAAGGAACGACAGTCACCGATTCATAGAACCTCTGT
CATCATATTCACCTACTACCAGTGGTTCAATGGCGGGCTACCTGACGAGA
CGTCGGACACCACATCACTCTGTGAGTAAAAGCGACACGtatcaattttc
tttggacGGTGACGAAGATTTCAAGACGCCTTCGTGTAGCTATTCAGCAC
ATTCTGAATCCGACTCAAGGGTAAACACAACTCGCTTTTATTTATGACCT
TttctacagttgactctcgctaataaTTAGAACCCGAATGAGTTATTCAT
GATATgaaccactgcaatgacttcacgaaattatgcaacctttctgtttt
tgttccacccaatacgtcactttttctattgtttaagtgacgtattgggt
ggaacattTTAAAAgctctcagaagactctccagtgttgcatatcatgaa
tataaagTATTTTAAGTTATGTTTTTTCCGTTAAGGAAATTAGTTTGAAT
AACTTAGGaaggttcgaataatagaagttcgaattattaGCGAGAGTCTA
CTTCATTTACAAAAAACTTCGTCTGCAGGCATTTCACCtttttatcgttt
taaacaaacaaacattaaTAGAAGGgacaaattattttctaaatagACTG
GATTCGTTTATGCAAACTGAAATTATCCCGTATTAATTGGGCTATCTCAG
AAAATACTTGTACCCTATATGTTTGGGGTCTTTTATTTGGAAAAGTGACC
CTCCtgaatttgttttttcatttttcaggagcCACTTAGCtttttttACT
CACACTGGATTTTCAACCTAATTTTaatgaccaccctggatttttttatt
ttccagaccttCCTGGAcctcacacctcctcaacaaaaGGGGTgaagact
atttctggaatagcccattatcATACTCGTCTTACTGTAATACCCGGATT
ATTAAACGACACAAGTCTATGTTGATCGTTAGAGTGATTGTAAAAGTTTT
GTGCTTTGGAACCCCCGTTCGTGATTGCAAAATTCTTACTTACTACACAC
ACTACACACGAAAATACTGTCCCTTCTATGTACTTTACGTCCCTGAATAC
CTCTAGAAAGTTAATCATTCTTTTTGCCTTTGATTTATCGAGCTTTTTTA
AAAAGTACACACACATAAGTAGTTGTGGTCTCTTGTGATCAGTACTCTTA
CGCCCACGCatgcatacacgcttttttttataagaatatctttctataag
aatatcagggtgaaaattggccaaatcgtaagaataccctctagggtgaa
ttccacagaatttgataagaatacagtcattttgtattcgGTTAatagaa
aaaactgcttcctttgttagagataaattgaatcTTTGagaaagaaatgt
aattttaacccaaatgttcactcaaaagtccaagactctcaaattgatca
tttctcatgtttgtagaaaagtcaagtctaaaaaagtaagaaaaggTTAA
GAATATCTCATCCACAATTATGGCACTTAAGAATaattgaccctcatcca
aagtacactattcttataaaaaaagcgtgtaacacaCAAACGATTAAGTG
ACCGCTCGTTTCAGCTTTCCTATAGAAACCAGTCTAATAATTAATGATTT
ACTTGCATCTGTAACATTACACTCtctatttttttaagttttcgaGTGAG
AGAGGTTCAATATCAGAAGACACAGCTTCGACATCCATGAAGTCATTTTT
AAATGATAGAGGTTTGACTGATTGATTTTAATGATATAGAGAATATAAAA
ATGCTAGCTTTAATTTTATCTAACACTCGCAGGGAACCTAAATGAAGGGA
AAATAATCTCTCATTTTTTAACAAGGGAAAGAACAACTCCCACcacctta
gctttccaaaaatgtatcaacaagtgctttgactaaaaaatcgagtgatt
ttacaaatttccccctactacaaGGGAAAGAACAACTCCCGCCaccacaa
attttgagaaattctctTATTTTTTCTGCTTTCTCAGTGTAAAGGAGTGC
CTCTTTTTATATCTTTTAAATTCGTTAGAGTagcctttttaatgaaatgc
ttttcatgtgttttttctttgttctagatcaaagatttctttgttttctc
ccacttttctgatattttcttgtttctataatgggcttttccagaaaaaa
tttgaataaaatcagtgatttaccccccggacaagcatcagttgaccccc
cggacaacccaaattacccctgaacagagcaaatttaaacccccctcccc
cggacaaggcaaattttgattatttttcgctacccccagACAATATACTc
gacccccatgtacggacattttctggaagagtccaATCTCCTTGTATTTT
CAGTCTTACCACCAATGAATCTAATTTCTgataaacaacaacaaaaacaa
gagGAGCGGACGTCGACGTCGTCCGACAATTCACGTAATTTGCGCCCGTT
TTCCTGCCACGTTTGTAGTTTCCGTGCGTGCGAGAAATACAATCTTTTAC
GTCACTACGACAACAGGCATTCGTTACGTAAACGTGACGTCAATATCGTG
TATCCGTGTCCTGTGTGTCAACGCACGTTCAAAGGGAAAACGTATTTGAT
AACTCATCTTGAAACTCATGCTGAGTCAATCTCAAAACCCTACCGTTGCT
CTATTTGTCAGGCGTCGTATGACAATGTGACGGATCTGGAACGTCATCAT
TTGTCTCACGAATTTGATCTGACCACGGACCCAGGTGAGGAGGATCAGGA
TGACGGTAAACCGAAAGAACGAACCTCTTTACTTCAATGTCAAAAATGCT
CTCTTGGTTTCGATTCACTAGAATCTTTACAGCGTCACCAAAGACGCCAT
ATTGAAACAATCGGCACCGGTACATCGGCCGTAACGACGGTAGCGGCGTC
AACGAACCAAGCATTTACTTTCAAACCGCTGACgaaaaagccgaaaaaga
atgggaatattaaaggactcaaaagaaaacccatcaaagaaaacaaagcc
gaacgaaaacacgataaagcgaaatttagaaaacGTCTCACAACAGGCCC
agaatttttaaattgtccATATTGTTCGAGTcaattctcaaataaaaact
tcAACGGAATTACGAACTTAAACATTCACTTACTATTAAAACACAAGAAC
ACGATCAAAGCGAAACCTCGTACTCCACCTTCACAAATGTCCGAAATGTG
TCAAATTGTTTACGTCCCAGACCTCTTTAGATTGTGCATTTACAGAAAAA
ACATGGTATTGAGTCTGACGAAAGCGCTCAAGGTAAGCAAAAATCGCCGA
GAAAGCGAAAAGAAATATCTGAAAGTGAGGTAAAACAAGACCTAGGAGAA
GAACATCAGTCCGCCGTCTCCACGAACATCATTAAAGGTGAAAGTGTGAA
TAAAAGTACTGTGAATTCTAATAATAAAACTGATCGAAAAGCTAGACTGC
GGAAACGTCTCGCAAAGAAACGATCCCAACTCAAATCCAAAATCATCGTT
ACGAGAACCCGCTCACAAAGCCCCGTTAAAGCTGCCTCGTCCTCATCAAA
CGGTGATGACGTGCCGAAAACATCGAAATTCAATAAACGGCGAGATGGCG
GTGCGTCAAATACGTCACAATCGGGTTCTGTATTCCGTAGAAAGGGACGT
CCGCCGGGTATCGGGAAAGTCATTGCCGGTAGAATCTTGAAGAAGTACCG
ATGTCCGCATTGTCACTTGACCTATATCCATCAACCGAGTTTCATTAATC
ACCAACGTACTTGTAAATCCTTGAAAGCTACCGCTCTTCAGTTGACCAAT
AAAAGACTCATGAAATCATAG Coding sequence (CDS) from alignment at sc0000121_pilon:931079..934999+ >XLOC_038111 ID=XLOC_038111|Name=XLOC_038111|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3622bp|location=Sequence derived from alignment at sc0000121_pilon:931079..934999+ (Clytia hemisphaerica_ch_hm2_pilon)
cAGACATCAAAAGGTTTTGGTTTAACCTACCCACCACGACGCACATCCCG
AATCGGAACCACCTCAAGGAACGACAGTCACCGATTCATAGAACCTCTGT
CATCATATTCACCTACTACCAGTGGTTCAATGGCGGGCTACCTGACGAGA
CGTCGGACACCACATCACTCTGTGAGTAAAAGCGACACGtatcaattttc
tttggacGGTGACGAAGATTTCAAGACGCCTTCGTGTAGCTATTCAGCAC
ATTCTGAATCCGACTCAAGGcAGACATCAAAAGGTTTTGGTTTAACCTAC
CCACCACGACGCACATCCCGAATCGGAACCACCTCAAGGAACGACAGTCA
CCGATTCATAGAACCTCTGTCATCATATTCACCTACTACCAGTGGTTCAA
TGGCGGGCTACCTGACGAGACGTCGGACACCACATCACTCTGTGAGTAAA
AGCGACACGtatcaattttctttggacGGTGACGAAGATTTCAAGACGCC
TTCGTGTAGCTATTCAGCACATTCTGAATCCGACTCAAGGttttcgaGTG
AGAGAGGTTCAATATCAGAAGACACAGCTTCGACATCCATGAAGTCATTT
TTAAATGATAGAGttttcgaGTGAGAGAGGTTCAATATCAGAAGACACAG
CTTCGACATCCATGAAGTCATTTTTAAATGATAGAGTCTTACCACCAATG
AATCTAATTTCTgataaacaacaacaaaaacaagagGAGCGGACGTCGAC
GTCGTCCGACAATTCACGTAATTTGCGCCCGTTTTCCTGCCACGTTTGTA
GTTTCCGTGCGTGCGAGAAATACAATCTTTTACGTCACTACGACAACAGG
CATTCGTTACGTAAACGTGACGTCAATATCGTGTATCCGTGTCCTGTGTG
TCAACGCACGTTCAAAGGGAAAACGTATTTGATAACTCATCTTGAAACTC
ATGCTGAGTCAATCTCAAAACCCTACCGTTGCTCTATTTGTCAGGCGTCG
TATGACAATGTGACGGATCTGGAACGTCATCATTTGTCTCACGAATTTGA
TCTGACCACGGACCCAGGTGAGGAGGATCAGGATGACGGTAAACCGAAAG
AACGAACCTCTTTACTTCAATGTCAAAAATGCTCTCTTGGTTTCGATTCA
CTAGAATCTTTACAGCGTCACCAAAGACGCCATATTGAAACAATCGGCAC
CGGTACATCGGCCGTAACGACGGTAGCGGCGTCAACGAACCAAGCATTTA
CTTTCAAACCGCTGACgaaaaagccgaaaaagaatgggaatattaaagga
ctcaaaagaaaacccatcaaagaaaacaaagccgaacgaaaacacgataa
agcgaaatttagaaaacGTCTCACAACAGGCCCagaatttttaaattgtc
cATATTGTTCGAGTcaattctcaaataaaaacttcAACGGAATTACGAAC
TTAAACATTCACTTACTATTAAAACACAAGAACACGATCAAAGCGAAACC
TCGTACTCCACCTTCACAAATGTCCGAAATGTGTCAAATTGTTTACGTCC
CAGACCTCTTTAGATTGTGCATTTACAGAAAAAACATGGTATTGAGTCTG
ACGAAAGCGCTCAAGGTAAGCAAAAATCGCCGAGAAAGCGAAAAGAAATA
TCTGAAAGTGAGGTAAAACAAGACCTAGGAGAAGAACATCAGTCCGCCGT
CTCCACGAACATCATTAAAGGTGAAAGTGTGAATAAAAGTACTGTGAATT
CTAATAATAAAACTGATCGAAAAGCTAGACTGCGGAAACGTCTCGCAAAG
AAACGATCCCAACTCAAATCCAAAATCATCGTTACGAGAACCCGCTCACA
AAGCCCCGTTAAAGCTGCCTCGTCCTCATCAAACGGTGATGACGTGCCGA
AAACATCGAAATTCAATAAACGGCGAGATGGCGGTGCGTCAAATACGTCA
CAATCGGGTTCTGTATTCCGTAGAAAGGGACGTCCGCCGGGTATCGGGAA
AGTCATTGCCGGTAGAATCTTGAAGAAGTACCGATGTCCGCATTGTCACT
TGACCTATATCCATCAACCGAGTTTCATTAATCACCAACGTACTTGTAAA
TCCTTGAAAGCTACCGCTCTTCAGTTGACCAATAAAAGACTCATGAAATC
ATAGTCTTACCACCAATGAATCTAATTTCTgataaacaacaacaaaaaca
agagGAGCGGACGTCGACGTCGTCCGACAATTCACGTAATTTGCGCCCGT
TTTCCTGCCACGTTTGTAGTTTCCGTGCGTGCGAGAAATACAATCTTTTA
CGTCACTACGACAACAGGCATTCGTTACGTAAACGTGACGTCAATATCGT
GTATCCGTGTCCTGTGTGTCAACGCACGTTCAAAGGGAAAACGTATTTGA
TAACTCATCTTGAAACTCATGCTGAGTCAATCTCAAAACCCTACCGTTGC
TCTATTTGTCAGGCGTCGTATGACAATGTGACGGATCTGGAACGTCATCA
TTTGTCTCACGAATTTGATCTGACCACGGACCCAGGTGAGGAGGATCAGG
ATGACGGTAAACCGAAAGAACGAACCTCTTTACTTCAATGTCAAAAATGC
TCTCTTGGTTTCGATTCACTAGAATCTTTACAGCGTCACCAAAGACGCCA
TATTGAAACAATCGGCACCGGTACATCGGCCGTAACGACGGTAGCGGCGT
CAACGAACCAAGCATTTACTTTCAAACCGCTGACgaaaaagccgaaaaag
aatgggaatattaaaggactcaaaagaaaacccatcaaagaaaacaaagc
cgaacgaaaacacgataaagcgaaatttagaaaacGTCTCACAACAGGCC
CagaatttttaaattgtccATATTGTTCGAGTcaattctcaaataaaaac
ttcAACGGAATTACGAACTTAAACATTCACTTACTATTAAAACACAAGAA
CACGATCAAAGCGAAACCTCGTACTCCACCTTCACAAATGTCCGAAATGT
GTCAAATTGTTTACGTCCCAGACCTCTTTAGATTGTGCATTTACAGAAAA
AACATGGTATTGAGTCTGACGAAAGCGCTCAAGGTAAGCAAAAATCGCCG
AGAAAGCGAAAAGAAATATCTGAAAGTGAGGTAAAACAAGACCTAGGAGA
AGAACATCAGTCCGCCGTCTCCACGAACATCATTAAAGGTGAAAGTGTGA
ATAAAAGTACTGTGAATTCTAATAATAAAACTGATCGAAAAGCTAGACTG
CGGAAACGTCTCGCAAAGAAACGATCCCAACTCAAATCCAAAATCATCGT
TACGAGAACCCGCTCACAAAGCCCCGTTAAAGCTGCCTCGTCCTCATCAA
ACGGTGATGACGTGCCGAAAACATCGAAATTCAATAAACGGCGAGATGGC
GGTGCGTCAAATACGTCACAATCGGGTTCTGTATTCCGTAGAAAGGGACG
TCCGCCGGGTATCGGGAAAGTCATTGCCGGTAGAATCTTGAAGAAGTACC
GATGTCCGCATTGTCACTTGACCTATATCCATCAACCGAGTTTCATTAAT
CACCAACGTACTTGTAAATCCTTGAAAGCTACCGCTCTTCAGTTGACCAA
TAAAAGACTCATGAAATCATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121_pilon | genome | sc0000121_pilon:931079..934999 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1222-1809:3334 |
| Aaloc | 1165-1221:3276 |
| Aaloc | 346-1164:2456 |
| Aaloc | 271-342:1739 |
| Aaloc | 1-270:1 |
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