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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:717295..722098+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037950 ID=XLOC_037950|Name=XLOC_037950|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4804bp|location=Sequence derived from alignment at sc0000058_pilon:717295..722098+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAATGTTTTATCGTCGACTCATGGTATGTCATTACAGCAGACTCG
ACGAATGTCAGCAATGAGTAAGATTATTGATTATCATTATTTtcattcat
aaaattttatttcacatGTCTATTTCACTTGACCTCAACAAAAtaattat
gaattttttaatGAGCCATTCCCAATTTCACAGTACTAGAGCGCTGATAC
TAACAAATGCATGCATGGCTTAATCTTTGAGATAGGTATATGACTATACT
GGCAGGATCAACCAGTAAAACGGTCCGAAATTCAATATTCATTATAAACA
CTTTAATTTCTCTACTTTAGGTCCCTTTGAAGTCAGGAATTCAACAGAAA
AGTCTCGGAATGAAAAAAGTCAACTTACTCATTCCGTATTTTGATTTCGt
tagaatttatttatttgggTAATTAAAGTGCCTCAAAAAGTATATGTAAT
ACTTTAATCCCTGAATATATTTAAATGGTCTTGGGTCTACTTTTTTAAGT
AAATATAATGCTCCTTCAATCTTGCAAGTTCAATAATCAGGAACTTTCCT
ACTGATGGTCAGTCCTACGTGGCCaaattgatttgttgttttacagaTCA
AGaaaagccaaaatgagaaagcaaatgataaaacaaacatgaaaaaataa
attcctCAAGAACTAGAGTCGGGAGGAAAATAATCAAGGCCAAGCGATTC
GTTATCATGACTCAGCAACGGGagccgtaaaacaactaatcaaattggtc
ttgcCTGTAAAGTGTAGCTTTTCATTCAATCAACTGTcacatgaatattt
ttatttttccatttcattaaGAATCATGATTCAGACCTGTTTGGAACTAC
ACTGGATAGTATAGATGACGAATCACTGCTGGGACACGTTGGAGGTATGT
GTGCAATTTGAATAGACCGAATTGATATATTTCTGAATAGAAAGTGTAAA
TGTAAAATCATCTATTTTCGTGTATTGTAACTGATTCAGTATGTCTGTTA
GAAATCTCTCCGGTGGAAGTAGGTCTGTAAGTTGTACTGTAATGTCACAG
AAACGTTCAATAAAAGCAATCCCTTCAAAATGTTTCTCTTAAAAGTCGTT
AATAATATTGCCTATATCAAATTTGACTTATTATATTTTCTCTTCGGAtc
tttgtttagaaattgatgaTGTTTTGGCTGTATTCGAGGTAAAATTGTGC
TTTAATTTATTTACTCCGTATATTAATTTGTTGAACGCTCggattgtttc
aaatttttcttaggTCCAGCCTTAGTTATGTTCCTGTGAAAATGTTCAAT
AATAACAAGAAcgttcttttttactttttagactTCTGCTTTGCGTCCTG
ATGTTATTGATTTGTAAGATATTTTACATATTTATTATCTAAAGATTATC
TGACATTCAAACATCCAACACCCTGTCGTTCCATGAAATTCAGCCGCTAA
CTGACCAGCGCAACTGTGCACATTGTATAGATCACTCTTCCTACTTGAAC
CCCATTGAAAATGTCGAAGAATCCACCCATACTCTACTAAAAGTAATATC
AGAGAAAAAATAGTGAGAATCAAGAATATTTTCGTCAACCACTTATTCTG
TTGTacagaatatttttttcgaatacTAGATGCTCCACACCCACTACAGT
ACAGACTCTTCTTTCTCAATTGGAATTTCTCATATTTTGACAAACCTGAT
GTTTTATAGGAGAGACGAGGCAAGCTGTGAAGATGACGACGACATTGACA
AATCAAACCCCGAGACAATTAGTATTACTCGACAGAAATGTACTGGTAAG
AATAAATAGGGTAAAAGGGTGACAAAAACCAGTTTGCTGAATCCGATTCT
CCTAATTTTTATGATGGCGATGGCTTCATCTACGGGTTTGGTCGCTACCT
AGCGTAGATTCCTGCGCTGTGATTGGCttagaaattttgtaatgaCTTTC
GGGAATTCTCCATATCaagtcaaaagacaaagaaTGTTTCAGAAATAAAA
ACGCAAAcactttttcaacaaaaaaggtTAAGTTTATATTTGTGTCAATT
AATAGCGTGACGAGACACGACTGCACACCCCACAGGTGTAATCTGGCTCG
AAAGAGCCAtcacaaaaataattttgatttctaGTAACTCATTCAACAAA
ATGCTTCATTAACCTTTCACCGGAAGATAGTAAGTGCGATATTTGATTCA
GGTAAAAGGGGGTGATGATGCTTAGGATCCTACTCTTAGAATCATACTCT
ATACTCAGGGAAATAATATTATATATGAAAGCGTTGCCGCGCTAAAGGCA
AATGGCACGATATTTCTTAAAACAGGTTTTGTCGGTAGGACTGGGTTATT
TTTCCCTGAATCCTAAAACAATGGAAACACTTAAAAAGGTTTTACATTAA
AATGATAGTATATAAGCTAGTTGAAAGGAATTTTAATTTGATTGATtcac
aaaatttgaaagaataGACAAAATTAAACGATTACCACATCGATAAGGAT
TAAAACTTAGATTTCCAACTGTAAACGAGAAACCTGGAAATGAAAACCCG
TTTGCTCAGGTTTGCATCCAAATAGTCTGCACTTTAATATAATCCCAGAC
ACTTCCAGGCAGTGTGTTCAGAAAACAAgtgtgatagactctctactttT
CGCTGATAAACAGTATTACATCTTAGCTGAGAGTTCAGAGTTCAGCAGGA
ATATTTTATCTGGGAATCTCTGTATTTTGATCGTAATTCGATTGcaattc
ttgaaaaattacGTGGATCATAAGGGTTGATTCCATTGATAGCAAACGGG
GATAGCAATTACAGTAAATATTAATAGACCGATTCCTAGTGACGTCAATT
TCGTCAACGATTAGCCATTCTTCTGAAAAATAGTATGAAGAATATAGGGT
GATTACACCTTTCTCTACAAAGGTTGTAAATTATTCCTATTTGGACCTGC
GCTTagtagtttgtttgtttttgtttagtCTTCGTTTTATTCGCTTAGAA
CAGATCATCGATTTATTATAGAGAACTATAATAAATCAATGAACAGATTA
AagcacacttaaagcgaatggtCTTTGTGTCTATGTGGTGTCGCTAATTT
AGATAATTGGTAATTTTTCAGTTCGTTTCACTATTTAGCCTTCGAACGAG
TTGTTAATGAACCTGAGAGAAATATTGTCATGGTTAAAACAGGAGCAATC
GAGGTCAAAGACGTCAACTTAAAAGCCCTCGCCAAGGGGAAACTTAAGGA
CATCATCATACATGGCTTCATTTTGCATTTACTGAGCATCCATGTAAGtt
tttttATCTTAAGtctgttcttaaaattatattgaaatgattttgacGCC
TTGCTCTGAGAAGAGACAAGATTTCAGGGCACTCTACGTGTCCACCAAAG
CAAAGGTCATTACATCTGACGGAGACactgatatttttgacattcatgCT
GGAGTTCTACAAGGTGACACCTTAGctccctttctttttatcattgtttt
agattatgttttaagaatttctgttgacTTATCTAATGACaagggaatca
aaattaaagttccccTGCGCAAGCGTAACCGCGGCCTTTTTCTGACCGAT
CTTGACTTTGCTGACGATCTTGCCTTAGTTTCTGAGagtattcaaaatct
tgaaagtctTCTTCACTCACTTGAAACTTCGGCCAGTCAAGTCGGTCTTT
ATtgcaatgctggaaaaactgaatttatcagCTCCTCTGGAAATGTTCTC
CCTTTAACTTCAAAGAATGGTGTCAATATCAAACTTGTGAAGGATTTCAA
ATATCTTGGCTCTCATATTAACAGCTctgaaaacgattttaaaattagga
aaggtctagcttggaaagctTGCAATAAGTTAAACAAGATATGGCACTCT
AATTTGTCTAACGCtcttaaacttcaaacttttagaagtcttgtcgagcc
cattcttctatatggctcggagacttggaccatgacaaaaaccatgctga
agagccttgatggctgctatacaaatcttttgaaaagagtccAGAATCTT
GATTGGCGCAACCACCCAACCCTTCAAGAGATATATCATGGACTCCCAAG
AATTTCCTCTGTCCTGACTAGCAGGATGCTCTCTTTCTCAGGTCACTGTT
TCCGTGCGAAAAACGAAATGGTGTCTGAGATCTTATTTTGGTGTCCTGCG
GGCCCTAGGCGCTCGAGAAAGCGcacttttcttgatattttgaaacgaga
aacagggctagagattgaggaactgggcactgcaatggctgatcgagagc
tgtggagggatggttattgtttgtttccgacctaggtccattcggaccta
ggtcgaaggatgatgatgatgatgatgacaaGATTTATCAAAAAGGAATA
CCTcaccgaaaaaataatttcgagcGCATCATTTTAAAGGCTTACAATCT
TTAGCCTACTTAGCGGCTAACTTAGAGAAGTTTTTGAAGTTTCAGAAAAG
CATAAATCAAGGATATTTAGTCCAGTaaataaaatcttcatttttttctt
cttcacttttcatcttcatttacgAAGTTTTTAAACgaattttaagcctt
aaaataatGCACTCAAGGAGATAATCAAATAATGCTTAATTTAATGTTGT
CAGTACCACCATAAGCTCCAAATTCATGATCCAGTATACATGAAACCTTT
CATATACAAAGGGCGAAAGTAATGTTGGTTTAATCGATTGCACAGTGTTG
GGTCAAGCTATTTCGACTTTTCCATCCACTAATAAATTGCCTGATGGCGT
CAAG Coding sequence (CDS) from alignment at sc0000058_pilon:717295..722098+ >XLOC_037950 ID=XLOC_037950|Name=XLOC_037950|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1290bp|location=Sequence derived from alignment at sc0000058_pilon:717295..722098+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAATGTTTTATCGTCGACTCATGGTATGTCATTACAGCAGACTCG
ACGAATGTCAGCAATGAATGGCGAATGTTTTATCGTCGACTCATGGTATG
TCATTACAGCAGACTCGACGAATGTCAGCAATGAGTCCCTTTGAAGTCAG
GAATTCAACAGAAAAGTCTCGGAATGAAAAAAGTCAACTTACTCATTCCG
TCCCTTTGAAGTCAGGAATTCAACAGAAAAGTCTCGGAATGAAAAAAGTC
AACTTACTCATTCCAATCATGATTCAGACCTGTTTGGAACTACACTGGAT
AGTATAGATGACGAATCACTGCTGGGACACGTTGGAGAATCATGATTCAG
ACCTGTTTGGAACTACACTGGATAGTATAGATGACGAATCACTGCTGGGA
CACGTTGGAGaaattgatgaTGTTTTGGCTGTATTCGAGaaattgatgaT
GTTTTGGCTGTATTCGAGactTCTGCTTTGCGTCCTGATGTTATTGATTT
actTCTGCTTTGCGTCCTGATGTTATTGATTTGAGAGACGAGGCAAGCTG
TGAAGATGACGACGACATTGACAAATCAAACCCCGAGACAATTAGTATTA
CTCGACAGAAATGTACTGGAGAGACGAGGCAAGCTGTGAAGATGACGACG
ACATTGACAAATCAAACCCCGAGACAATTAGTATTACTCGACAGAAATGT
ACTGTAACTCATTCAACAAAATGCTTCATTAACCTTTCACCGGAAGATAT
AACTCATTCAACAAAATGCTTCATTAACCTTTCACCGGAAGATACCTTCG
AACGAGTTGTTAATGAACCTGAGAGAAATATTGTCATGGTTAAAACAGGA
GCAATCGAGGTCAAAGACGTCAACTTAAAAGCCCTCGCCAAGGGGAAACT
TAAGGACATCATCATACATGGCTTCATTTTGCATTTACTGAGCATCCATC
CTTCGAACGAGTTGTTAATGAACCTGAGAGAAATATTGTCATGGTTAAAA
CAGGAGCAATCGAGGTCAAAGACGTCAACTTAAAAGCCCTCGCCAAGGGG
AAACTTAAGGACATCATCATACATGGCTTCATTTTGCATTTACTGAGCAT
CCATGGCGAAAGTAATGTTGGTTTAATCGATTGCACAGTGTTGGGTCAAG
CTATTTCGACTTTTCCATCCACTAATAAATTGCCTGATGGCGTCAAGGGC
GAAAGTAATGTTGGTTTAATCGATTGCACAGTGTTGGGTCAAGCTATTTC
GACTTTTCCATCCACTAATAAATTGCCTGATGGCGTCAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:717295..722098 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 553-645:4712 |
| Aaloc | 400-552:3141 |
| Aaloc | 355-396:2137 |
| Aaloc | 268-351:1711 |
| Aaloc | 235-264:1332 |
| Aaloc | 208-234:1162 |
| Aaloc | 133-204:822 |
| Aaloc | 70-132:323 |
| Aaloc | 1-66:1 |
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