|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:1034919..1038399- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037949 ID=XLOC_037949|Name=XLOC_037949|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3481bp|location=Sequence derived from alignment at sc0000104_pilon:1034919..1038399- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCACCAAGGAGTAATCATCGTTACAAATGAGAGAGTCAATGAAAA
TCTAATGCCTCTTTCTCAAGGTACCTACCATTTAAATCTTTAATTCAATG
GTCTTGATTATTCTTGATGATTTTATCTGATTTTTTTAAACGTAAAAAAG
AAGCAATGAGCATCCCAAGCTTCTTCATTTCATGGAAATAAATTAATTGA
TATAAGTTGTCACTTTTGAAATAGCAATAAAAGGTGAATAGTGCCATACC
CACAATGTTGAAAATTTAAAAAGTACCACAGTGTTAGTTTTGAACAAATG
GCTGCTTTTCATAAACAATCTATTTTGTTCTTTTTTTAGATGGTAACATG
AACCCTTCAAATGGTGGTTATCTTCTGAACAACTTATCCTTTCAATCTCA
ACTGTCTAATGAAACCTTAGCACATCAGCCACTATCTAGAATGATTAACC
CAACTCAATCAATGATGCCAACACTTATGGATCAGAGCATATCAAACATA
TCAGGACTAGTAGGTAAGGCTTAAAGGAAATGTTACTGTATTATATGGGT
GTCTGCGATGTATACACTAAAATCTGGCTCCACCAATGAATGAGTAAATT
TATTTGATTGGCTTATTGGTATATTGAAAGTTGTTCCAATAGATATCATA
AGTAGATCTTACATTGTATCTATAGACAAAAACTTCAGTGAAAGCATAAA
ACCAGAAAAAGCTAGAACGATGTTGAATTAAAAGAAAGGGAATGTTTAAA
GAAAGTGACTTTTATGTAACACTCCTATCAACCTATTCTTTAAAATTATA
GTGTAAAAACACCAATCTGTTCTTTATAAAAATAACAAGTTTTTAAAGAT
GTTATGTTAGCGCTTTAACCCATTCTATCAGTTTTTTTCTTTTAAAGTTG
TAATAAAAGATGAAGAGTACCATACCCACAATCTTGAAAATTTAAAAATA
TTCACAGTGTTAGTTTTGAAAGAATGTCTTCTTTACATAAACAATCTATT
TTGTTCATTTTTTAGATGTTAACATGAACTCTTCAAATGGTGGTTATCTT
CTGAACAACTTATCATTTCAATCTCAACTGTCTAATGAAACCTTAGCAAA
TCAGCCACTATCTGTAATGGTTAACCCAACTCAATCACTGATGCCAACAC
TTATGGATCAGAGCGTATCAAACATATCAGGACTAGTAGGTGAGGAAATG
TATTATATGGGGGGTCTGTGGTATACACTGAAATCTTGCTCCAATCAGTA
AATTTATTTCATTGGCCCTATTAATATATTGAAAGTAGTTCCAATAGATA
TGTCCAATTAAAAAGTAGATCTCACATTGTATTGTCAATTAAAAATATAA
AACCAGAAAAGGCTAGAATGATGTTGAATAAAAGAAAGGGAATTTTTCCC
TTGAAAAGAAAGTGACTTTTTATGCATTTACAACTCCTATCAACTTCTAC
ATTTAATAGTTTTGATTTCTGCCTGGGCTTGCTTGCATCTTTAGGTTTCT
CTCCATTTGTTCTAATTGTTTTTGAATGTAAAATTCAATTGTTATCTATT
ATGGATAAAAAAACATGCAAGTTTGAATATTGTTCAACATTTTTCTCATG
ACTTCAGACTGAATCAAAACTTTAATTTCCTGTGTGGAAAATCCTGATAA
CACATAAAACATAATTTTTGTTAAAAAAGTGATCAAGACACGTCAAATTT
AAAAAAATTTCAAAAAATATTGTTCTGTACAGTCACTGACATCATCTGGC
GGATTTTTCGGTGAGAATTCGATTACCTAACCAAATCAATTTTCATTTCA
AAAAAGTGTACCTTATTTTGTCATGGTGTGGTCGAAACTCAACTTTTAAT
AAATTCATTTTTTGTTTGAATCAGAGTTTGTTAAGCAGCTACCAACGGAT
GAATGCTGCAATTTCTTACGCTTTGTTATTGGATGTGAGCGACTGGCAAA
GATTTAGGTTGAGTTTAATGGTGCAATCTATCGAGAGCTTATGGTACATC
TTCCTCACACATGTGGGCCTACATTAGATTGTTTGAATCAGACATAAAAT
ATTATTTGGAAATTCTTTTCTGTATTTTTAGATGTTGATTTGAATCCATT
AGCTGGTCCAGTTGTCAACAACCTTACTAACCTTATACACCTACCAACCG
ATATCAGTTCGGCCCTCAGTGAATCATATTCTGTACCATCAACAGCAGAT
CCAGTTGCTAACCACCAGCCTGCAACATTAAACAGATCGACCAGCAGTCT
CTCACCTTCCGTACCATCGACAGCAAATCCAGTTGCCAGCCACCAGCCAA
CACTGTCAAACTGCTCAACAATCAGTCTCTCACCGTCTGTACCATCAACA
GCAAATCCAGTTGCTAACCACCAGCCTGCAACATTAAACAGATCGACCAG
CAGTCTCTCACCTTCCGTACCATCAACAGCAAATCCAGTTGCCAGCCACC
AGCCAACACTGTCAAACTGCTCAACAATCAGTCTCTCACCGTCTATACCA
TCAACAGCAAATCCAGTTGCTAACCACCAGACTGCAACATTAAACAGATC
GACCGGCAGTCCATCACCTTCTGTACCATCGACAGCAAATCCAGTTACCA
GCCACCAGCCAGCAACGTTAAACAGATCAACCAGCAGTCTATCATATTGT
ACAGGTGCTCCATTACTGTCAGCGACAACTCTTCCTGGTGGATCCTCGAT
TTCTAGATCTCAGCCAATTAGAGCATCCGACATAGTTTTCACCATAAATT
TAAATATAACGTATGGTGTCAACAAAGCCCAATTAAAAGTAAGACGCTCT
CAATCACCAGAGGTTCTCTACTTAAAAGTTGAACAATTATTTCCCAATCT
AATTGGGAAAAACTACCATTTAGTGAACAGTCTTGATAACAAGTATTACA
TTAGACGAAACACCCCATTGCATTTGAAAACGTTTGTTAAAGATAATGAT
ACCGTCGAAGTTGTTTCAGAAGATGCCTAAATATTTAACAACCAACTAGA
CATACCATCCGATTTAACTTTCTTAGAGAAAATGAGAAGTGACACCTTGG
AAAAGTTCACCCAAAGACAAGAACTCTTGATCAGGAGAACCAATTTAGTT
GATGATACCATGACACAATTCAACTTCTCAAATAGTAATATATATTTCAG
ATTTGAAGGCGAGAGAGGAGAGGATCTAGATGGTTTATCGAGAAGTCTTT
TTTCTGACTTTTGGAATGCCTTTTGTGAAAAATATGGTATTGGTTATGAT
AACTATTTGCTAACCAACCCGTCACACTCCCTATCACCAATATTGATGAA
GAATTTAGGTCAAATATTAGCTTCTGGTTATATGATTGCTAATTACATAC
CACCATTTATCAACAACGCAGTACTATTTCAGATTTTAACGGGTAACGAG
CCATCCAACGATTTCACAAAGAGAGAATTCTTGAAGTGTTTAAACAGAGA
AGATTTCAAAGTCTTGCAGAGAGCATCTGAA Coding sequence (CDS) from alignment at sc0000104_pilon:1034919..1038399- >XLOC_037949 ID=XLOC_037949|Name=XLOC_037949|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3324bp|location=Sequence derived from alignment at sc0000104_pilon:1034919..1038399- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCACCAAGGAGTAATCATCGTTACAAATGAGAGAGTCAATGAAAA
TCTAATGCCTCTTTCTCAAGATGAATCACCAAGGAGTAATCATCGTTACA
AATGAGAGAGTCAATGAAAATCTAATGCCTCTTTCTCAAGATGGTAACAT
GAACCCTTCAAATGGTGGTTATCTTCTGAACAACTTATCCTTTCAATCTC
AACTGTCTAATGAAACCTTAGCACATCAGCCACTATCTAGAATGATTAAC
CCAACTCAATCAATGATGCCAACACTTATGGATCAGAGCATATCAAACAT
ATCAGGACTAGTAGATGGTAACATGAACCCTTCAAATGGTGGTTATCTTC
TGAACAACTTATCCTTTCAATCTCAACTGTCTAATGAAACCTTAGCACAT
CAGCCACTATCTAGAATGATTAACCCAACTCAATCAATGATGCCAACACT
TATGGATCAGAGCATATCAAACATATCAGGACTAGTAGATGTTAACATGA
ACTCTTCAAATGGTGGTTATCTTCTGAACAACTTATCATTTCAATCTCAA
CTGTCTAATGAAACCTTAGCAAATCAGCCACTATCTGTAATGGTTAACCC
AACTCAATCACTGATGCCAACACTTATGGATCAGAGCGTATCAAACATAT
CAGGACTAGTAGATGTTAACATGAACTCTTCAAATGGTGGTTATCTTCTG
AACAACTTATCATTTCAATCTCAACTGTCTAATGAAACCTTAGCAAATCA
GCCACTATCTGTAATGGTTAACCCAACTCAATCACTGATGCCAACACTTA
TGGATCAGAGCGTATCAAACATATCAGGACTAGTAGATGTTGATTTGAAT
CCATTAGCTGGTCCAGTTGTCAACAACCTTACTAACCTTATACACCTACC
AACCGATATCAGTTCGGCCCTCAGTGAATCATATTCTGTACCATCAACAG
CAGATCCAGTTGCTAACCACCAGCCTGCAACATTAAACAGATCGACCAGC
AGTCTCTCACCTTCCGTACCATCGACAGCAAATCCAGTTGCCAGCCACCA
GATGTTGATTTGAATCCATTAGCTGGTCCAGTTGTCAACAACCTTACTAA
CCTTATACACCTACCAACCGATATCAGTTCGGCCCTCAGTGAATCATATT
CTGTACCATCAACAGCAGATCCAGTTGCTAACCACCAGCCTGCAACATTA
AACAGATCGACCAGCAGTCTCTCACCTTCCGTACCATCGACAGCAAATCC
AGTTGCCAGCCACCAGCCAACACTGTCAAACTGCTCAACAATCAGTCTCT
CACCGTCTATACCATCAACAGCAAATCCAGTTGCTAACCACCAGACTGCA
ACATTAAACAGATCGACCGGCAGTCCATCACCTTCTGTACCATCGACAGC
AAATCCAGTTACCAGCCACCAGCCAGCAACGTTAAACAGATCAACCAGCA
GTCTATCATATTGTACAGGTGCTCCATTACTGTCAGCGACAACTCTTCCT
GGTGGATCCTCGATTTCTAGATCTCAGCCAATTAGAGCATCCGACATAGT
TTTCACCATAAATTTAAATATAACGTATGGTGTCAACAAAGCCCAATTAA
AAGTAAGACGCTCTCAATCACCAGAGGTTCTCTACTTAAAAGTTGAACAA
TTATTTCCCAATCTAATTGGGAAAAACTACCATTTAGTGAACAGTCTTGA
TAACAAGTATTACATTAGACGAAACACCCCATTGCATTTGAAAACGTTTG
TTAAAGATAATGATACCGTCGAAGTTGTTTCAGAAGATGCCTAAATATTT
AACAACCAACTAGACATACCATCCGATTTAACTTTCTTAGAGAAAATGAG
AAGTGACACCTTGGAAAAGTTCACCCAAAGACAAGAACTCTTGATCAGGA
GAACCAATTTAGTTGATGATACCATGACACAATTCAACTTCTCAAATAGT
AATATATATTTCAGATTTGAAGGCGAGAGAGGAGAGGATCTAGATGGTTT
ATCGAGAAGTCTTTTTTCTGACTTTTGGAATGCCTTTTGTGAAAAATATG
GTATTGGTTATGATAACTATTTGCTAACCAACCCGTCACACTCCCTATCA
CCAATATTGATGAAGAATTTAGGTCAAATATTAGCTTCTGGTTATATGAT
TGCTAATTACATACCACCATTTATCAACAACGCAGTACTATTTCAGATTT
TAACGGGTAACGAGCCATCCAACGATTTCACAAAGAGAGAATTCTTGAAG
TGTTTAAACAGAGAAGATTTCAAAGTCTTGCAGAGAGCATCTGAACCAAC
ACTGTCAAACTGCTCAACAATCAGTCTCTCACCGTCTATACCATCAACAG
CAAATCCAGTTGCTAACCACCAGACTGCAACATTAAACAGATCGACCGGC
AGTCCATCACCTTCTGTACCATCGACAGCAAATCCAGTTACCAGCCACCA
GCCAGCAACGTTAAACAGATCAACCAGCAGTCTATCATATTGTACAGGTG
CTCCATTACTGTCAGCGACAACTCTTCCTGGTGGATCCTCGATTTCTAGA
TCTCAGCCAATTAGAGCATCCGACATAGTTTTCACCATAAATTTAAATAT
AACGTATGGTGTCAACAAAGCCCAATTAAAAGTAAGACGCTCTCAATCAC
CAGAGGTTCTCTACTTAAAAGTTGAACAATTATTTCCCAATCTAATTGGG
AAAAACTACCATTTAGTGAACAGTCTTGATAACAAGTATTACATTAGACG
AAACACCCCATTGCATTTGAAAACGTTTGTTAAAGATAATGATACCGTCG
AAGTTGTTTCAGAAGATGCCTAAATATTTAACAACCAACTAGACATACCA
TCCGATTTAACTTTCTTAGAGAAAATGAGAAGTGACACCTTGGAAAAGTT
CACCCAAAGACAAGAACTCTTGATCAGGAGAACCAATTTAGTTGATGATA
CCATGACACAATTCAACTTCTCAAATAGTAATATATATTTCAGATTTGAA
GGCGAGAGAGGAGAGGATCTAGATGGTTTATCGAGAAGTCTTTTTTCTGA
CTTTTGGAATGCCTTTTGTGAAAAATATGGTATTGGTTATGATAACTATT
TGCTAACCAACCCGTCACACTCCCTATCACCAATATTGATGAAGAATTTA
GGTCAAATATTAGCTTCTGGTTATATGATTGCTAATTACATACCACCATT
TATCAACAACGCAGTACTATTTCAGATTTTAACGGGTAACGAGCCATCCA
ACGATTTCACAAAGAGAGAATTCTTGAAGTGTTTAAACAGAGAAGATTTC
AAAGTCTTGCAGAGAGCATCTGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:1034919..1038399 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 634-1662:1030 |
| Aaloc | 421-633:1399 |
| Aaloc | 247-417:2465 |
| Aaloc | 73-243:3141 |
| Aaloc | 1-69:3482 |
|
