|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000165_pilon:512101..515802+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037916 ID=XLOC_037916|Name=XLOC_037916|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3702bp|location=Sequence derived from alignment at sc0000165_pilon:512101..515802+ (Clytia hemisphaerica_ch_hm2_pilon)
CATGGCATCTGTCAAAGAACTAATGCCAATGAAGCAACGTGTATTTGTCC
AGTGTGTGCGTCCACGTTTGGTTATGAACCAATTTGTGGAAGTGATGGTC
AAACATACTCAAATGAATGTGCTTTGAAAATGGCCAGTTGCAAACAACAG
AAAGAAATCTTCATTTATAAACGTGAATCTTGCGGTGAGAAGAGCTTCcc
actttctttaaaaaataggCTTTAAAATAAAAACGGCATGAGATGGATTC
TTTAGTTTCTCTAAGTATCATTTTAGTCCGGGAACTTTGGGGAGTTAAAC
TATGACAGCCATAGAGGCACGGGTAAATATGTAGCATCTTAAAGCACAAC
GTCTGAATTGTTTCTTCTGGGTTGGTTTCTCTATTTTAATTGTTTCTCTT
CGATTCCAACCTTTTTATCTGAGTCTTATCATTTTCTTCTAGGAATCAAC
GAAGAGCTTGACTTATACGTTGCCATGGACACATCAAACAAACATACTCC
AGAAAGTTTCCAAACGCTGAAATTGTATGCAAAGGGAATCATCGATGAAT
ATAAGATTGGGGACGAGTCACGTGCTTCTTTGCTGTCATATGATTCGTCG
CCTGAGGTTGTGGTCGATATCAACTCCAAAGCAACTGGCAAAGACATCAA
ATCTATTATCGATTCTCTACAGTTCAACACCAACAGTCGACCAAGATTGA
GTCAAGTCTTGAATGAAATTGTCAACCTCTTAAACGAGAGACAGAATACT
GTCCGATCAAAAGTTCCTGCTAATGTCTTGGTCCTCTCCAAAGGTAAGGT
GTTTTATGGAGGATGGTTATTAACACAATTATCTGGTTTTGTCGTCTTCA
GATTGACAAAGGTTTTCaatataaacaaacttttttgtgactttttaatC
TTGACCGACTTGGGTGAGGTAGCAAGGTTGATAGTAAAATACAGTCATTG
ACTGTTCCGCgtcaaatatattttgatttctCGCTTATTCTTCTTTAGAC
ATTACTTCCACGGAGATTTCCAACTCAAGACGTCTCATAGAGGACATTCA
GCAGCGTGCTCGCCTATACATGGTTCTTTTGAACGGTGAGCGAGCGGACT
CATTGAGACAATATTTCACCATCAAACGGAACTTAATGGTTGTGGATGAG
CGAGACCATGGCTCTGGACTCACAAACTTGACAGAAGTCATTGGTGGAAA
CAACGGTATGTCTTTactttcgtgttttgagtcaaGTCCAACGGGTTTAA
CATGAACCCGTAGCTGATGAATGGTAGGGTaaaaaaaTGGTTGTGAGTTG
GTTTTTCAGTGGTTCTAGTGAGTGATCAGAGGAACATCAGAACCACTTGA
TTGCAATATTCAAAGGACAACACTAGTAAAATCTAAAGCAcgataatttt
ttattattccTCTATTTTGTCCGTAttagaatttttcaaacaattgcCGA
GGTTTCTTTTAATATAGGAAGTGTTTGAGTATTCTACATGAAAACAACga
cgaaaaagtttttttttaggtCAAAGTCAATCAACAGACGTTGTTTTTGC
GTATGGGTTAACCGATACCAACTTAAAGGATGACGTCACCTTAGCACGCC
AAATGAGTATGGCTATCGTCAACCAGCTGGCTGATAATGATAGAACATCA
GTGGGTGCTGTCCGTATGGAAGACCGTCCGGTTACTCTGTTTGACCTGAT
TCCCACTAATCGGAAAAACACTATTTTATCGAACTTGAAGTCTGCCAAAC
TTTCATCAATCAGTTTTGATATGAGAACTTCTTTACCTTATGTCGGTGAT
AAAGTTTTCAAACTGAACACAGATTTTCATTTCGATATCCCGAAAACACT
TGTCTTGTTTATCAATCAACCTCAAGACGTTCTCGTACAACAACAAGTCA
AAGAGCTTTTGGATAATGGAGTCAAAATCATTGCGATAGGTGTGGGTAAC
AGAGTCCAGTTACCAGACTTGTTGTTATTGGTGAATGGTAATCGAGACAT
GGTTCGTATAATCAAGACAAAAGATGACGTAACTGATGAAGCAGGTGTAG
ACGTTATCAAAAGACCAGGTACGAAATTTCGCTTTTATTACGATATATTT
TGAAAGCATTGTTATACCTTTTATATTTTAAGGTTAGACGAGGTCCgttt
agtttttttagtttagCTAGAAACTCAATAGTTTCTTTGCTTTAAACTTT
ACAACTTTTCTCTTCCAATATCACTCCAAAATCATCCATATTTACCTTAA
TCTTTATCTTTTCACAGAAATCAACTGTTCCCCATACGCCACTATTATAA
CTCAACGTGATGGATCACAAACTTGTTATTGCAAAGCTTGTAATAAGGAA
GTGTACAGCCAAGTGTGCGCCAGCGATGGCGTAACATACGGAAACTTGTG
TGAGATGAAGTATCAAGCTTGTCTCGCGAATGAAGATATTTCATTGAGGA
GTGATGGTCCCTGTGAGTTGGACTCTCTGCTTGATGTGGTCTTCGTATTG
GATAGTTCTGATGCAGTGGATACAGTAACTTGGCCACAAATCAAACGATA
CGTTTTGGAGATGGCCAACAGTTTCAAGATATCACCTGAATCTGTTCGAG
TTGGATTGATCAATGCTGGACAGACAGCGAAAGTTGTCTTGAAATTGACA
GAAGGAGATGACTTGAAGGATTTACTGCAAAGTTTATCGAAAGCTGATCG
CATTGGGGGAAAATTGGATTTGAATTCTGCTTTTGTAACAGCCTCTGAAC
AATTCGACAAGTCATCAAAATCTGCTAAAGTTGTGCTCCCAATACTTGCC
GGCCAAGATTTGGACAGATCTGCCATCAACAAACAAGTGGAGAATCTGTT
AAAGCAAGACATTGTGGTGAAAACCGTTCTCCTCTCTGATGACGATAGTA
TTGACAGCTCCAAGAATGTTGGAGACACCTTGATCGTCAAAGATACAACT
TTCTTACCAAATGCAATTTCATTCATCTATCAATTCCTCACTAAAACTTC
AGGTACAAATtccatgttgttgttttttctacTTCTCCAAAGAAGTTTTT
GTGAAGCAAAAACCCTATCCGCTAATTgtgaaattcttttcatactAGAA
TTCAGAGACATAAGATTTTGCAGAATTTTCgttttatttgataatttttt
caccctTCTCTCATTTTAGCTTCACAAAACAAACTGGATGTTTTGCTGAC
TTTCATGACGTCACCGAAATCAACCGACCAATCaatgaacaaaatgaaaa
tgctagCTTCGGAATTCGTCACCAGACTTCCGCGCTCTCGGACACACACA
CGTCTCAACGTCTTAACATATGATAACATTATAGACTGGAAGGGAACACG
TGATTTATCACAGGCTAAACTGTCAGAAGCAATCAAAGGATTGGACTTGA
GAAAATCTCGCTCTGACACTTCACTCGTCTTATTCACCAAAACAATCGAT
CAAGCATATTCAGATAATTCCCGCCCAGATGTTGATTCTGTTGTTATCGT
TATCAGTGATGAAGCGccaagtaaagaaatatcttccTATTTGAACGGAT
TGGCgcgcaaaaaaattaaagttgtCACGGTGATCATGAATGGAGGTGTG
AAAGACTTGGGAGATGTTGTCATCCACCCGGGCGTCGATATCATCACAGG
CGGAGGAGAGGGCGGTAAAATTGTTGTCGATGAAATTGAGGAAGCCATCA
AG Coding sequence (CDS) from alignment at sc0000165_pilon:512101..515802+ >XLOC_037916 ID=XLOC_037916|Name=XLOC_037916|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5118bp|location=Sequence derived from alignment at sc0000165_pilon:512101..515802+ (Clytia hemisphaerica_ch_hm2_pilon)
CATGGCATCTGTCAAAGAACTAATGCCAATGAAGCAACGTGTATTTGTCC
AGTGTGTGCGTCCACGTTTGGTTATGAACCAATTTGTGGAAGTGATGGTC
AAACATACTCAAATGAATGTGCTTTGAAAATGGCCAGTTGCAAACAACAG
AAAGAAATCTTCATTTATAAACGTGAATCTTGCGCATGGCATCTGTCAAA
GAACTAATGCCAATGAAGCAACGTGTATTTGTCCAGTGTGTGCGTCCACG
TTTGGTTATGAACCAATTTGTGGAAGTGATGGTCAAACATACTCAAATGA
ATGTGCTTTGAAAATGGCCAGTTGCAAACAACAGAAAGAAATCTTCATTT
ATAAACGTGAATCTTGCGGAATCAACGAAGAGCTTGACTTATACGTTGCC
ATGGACACATCAAACAAACATACTCCAGAAAGTTTCCAAACGCTGAAATT
GTATGCAAAGGGAATCATCGATGAATATAAGATTGGGGACGAGTCACGTG
CTTCTTTGCTGTCATATGATTCGTCGCCTGAGGTTGTGGTCGATATCAAC
TCCAAAGCAACTGGCAAAGACATCAAATCTATTATCGATTCTCTACAGTT
CAACACCAACAGTCGACCAAGATTGAGTCAAGTCTTGAATGAAATTGTCA
ACCTCTTAAACGAGAGACAGAATACTGTCCGATCAAAAGTTCCTGCTAAT
GTCTTGGTCCTCTCCAAAGGAATCAACGAAGAGCTTGACTTATACGTTGC
CATGGACACATCAAACAAACATACTCCAGAAAGTTTCCAAACGCTGAAAT
TGTATGCAAAGGGAATCATCGATGAATATAAGATTGGGGACGAGTCACGT
GCTTCTTTGCTGTCATATGATTCGTCGCCTGAGGTTGTGGTCGATATCAA
CTCCAAAGCAACTGGCAAAGACATCAAATCTATTATCGATTCTCTACAGT
TCAACACCAACAGTCGACCAAGATTGAGTCAAGTCTTGAATGAAATTGTC
AACCTCTTAAACGAGAGACAGAATACTGTCCGATCAAAAGTTCCTGCTAA
TGTCTTGGTCCTCTCCAAAGACATTACTTCCACGGAGATTTCCAACTCAA
GACGTCTCATAGAGGACATTCAGCAGCGTGCTCGCCTATACATGGTTCTT
TTGAACGGTGAGCGAGCGGACTCATTGAGACAATATTTCACCATCAAACG
GAACTTAATGGTTGTGGATGAGCGAGACCATGGCTCTGGACTCACAAACT
TGACAGAAGTCATTGGTGGAAACAACGACATTACTTCCACGGAGATTTCC
AACTCAAGACGTCTCATAGAGGACATTCAGCAGCGTGCTCGCCTATACAT
GGTTCTTTTGAACGGTGAGCGAGCGGACTCATTGAGACAATATTTCACCA
TCAAACGGAACTTAATGGTTGTGGATGAGCGAGACCATGGCTCTGGACTC
ACAAACTTGACAGAAGTCATTGGTGGAAACAACGgtCAAAGTCAATCAAC
AGACGTTGTTTTTGCGTATGGGTTAACCGATACCAACTTAAAGGATGACG
TCACCTTAGCACGCCAAATGAGTATGGCTATCGTCAACCAGCTGGCTGAT
AATGATAGAACATCAGTGGGTGCTGTCCGTATGGAAGACCGTCCGGTTAC
TCTGTTTGACCTGATTCCCACTAATCGGAAAAACACTATTTTATCGAACT
TGAAGTCTGCCAAACTTTCATCAATCAGTTTTGATATGAGAACTTCTTTA
CCTTATGTCGGTGATAAAGTTTTCAAACTGAACACAGATTTTCATTTCGA
TATCCCGAAAACACTTGTCTTGTTTATCAATCAACCTCAAGACGTTCTCG
TACAACAACAAGTCAAAGAGCTTTTGGATAATGGAGTCAAAATCATTGCG
ATAGGTGTGGGTAACAGAGTCCAGTTACCAGACTTGTTGTTATTGGTGAA
TGGTAATCGAGACATGGTTCGTATAATCAAGACAAAAGATGACGTAACTG
ATGAAGCAGGTGTAGACGTTATCAAAAGACCAGgtCAAAGTCAATCAACA
GACGTTGTTTTTGCGTATGGGTTAACCGATACCAACTTAAAGGATGACGT
CACCTTAGCACGCCAAATGAGTATGGCTATCGTCAACCAGCTGGCTGATA
ATGATAGAACATCAGTGGGTGCTGTCCGTATGGAAGACCGTCCGGTTACT
CTGTTTGACCTGATTCCCACTAATCGGAAAAACACTATTTTATCGAACTT
GAAGTCTGCCAAACTTTCATCAATCAGTTTTGATATGAGAACTTCTTTAC
CTTATGTCGGTGATAAAGTTTTCAAACTGAACACAGATTTTCATTTCGAT
ATCCCGAAAACACTTGTCTTGTTTATCAATCAACCTCAAGACGTTCTCGT
ACAACAACAAGTCAAAGAGCTTTTGGATAATGGAGTCAAAATCATTGCGA
TAGGTGTGGGTAACAGAGTCCAGTTACCAGACTTGTTGTTATTGGTGAAT
GGTAATCGAGACATGGTTCGTATAATCAAGACAAAAGATGACGTAACTGA
TGAAGCAGGTGTAGACGTTATCAAAAGACCAGAAATCAACTGTTCCCCAT
ACGCCACTATTATAACTCAACGTGATGGATCACAAACTTGTTATTGCAAA
GCTTGTAATAAGGAAGTGTACAGCCAAGTGTGCGCCAGCGATGGCGTAAC
ATACGGAAACTTGTGTGAGATGAAGTATCAAGCTTGTCTCGCGAATGAAG
ATATTTCATTGAGGAGTGATGGTCCCTGTGAGTTGGACTCTCTGCTTGAT
GTGGTCTTCGTATTGGATAGTTCTGATGCAGTGGATACAGTAACTTGGCC
ACAAATCAAACGATACGTTTTGGAGATGGCCAACAGTTTCAAGATATCAC
CTGAATCTGTTCGAGTTGGATTGATCAATGCTGGACAGACAGCGAAAGTT
GTCTTGAAATTGACAGAAGGAGATGACTTGAAGGATTTACTGCAAAGTTT
ATCGAAAGCTGATCGCATTGGGGGAAAATTGGATTTGAATTCTGCTTTTG
TAACAGCCTCTGAACAATTCGACAAGTCATCAAAATCTGCTAAAGTTGTG
CTCCCAATACTTGCCGGCCAAGATTTGGACAGATCTGCCATCAACAAACA
AGTGGAGAATCTGTTAAAGCAAGACATTGTGGTGAAAACCGTTCTCCTCT
CTGATGACGATAGTATTGACAGCTCCAAGAATGTTGGAGACACCTTGATC
GTCAAAGATACAACTTTCTTACCAAATGCAATTTCATTCATCTATCAATT
CCTCACTAAAACTTCAGAAATCAACTGTTCCCCATACGCCACTATTATAA
CTCAACGTGATGGATCACAAACTTGTTATTGCAAAGCTTGTAATAAGGAA
GTGTACAGCCAAGTGTGCGCCAGCGATGGCGTAACATACGGAAACTTGTG
TGAGATGAAGTATCAAGCTTGTCTCGCGAATGAAGATATTTCATTGAGGA
GTGATGGTCCCTGTGAGTTGGACTCTCTGCTTGATGTGGTCTTCGTATTG
GATAGTTCTGATGCAGTGGATACAGTAACTTGGCCACAAATCAAACGATA
CGTTTTGGAGATGGCCAACAGTTTCAAGATATCACCTGAATCTGTTCGAG
TTGGATTGATCAATGCTGGACAGACAGCGAAAGTTGTCTTGAAATTGACA
GAAGGAGATGACTTGAAGGATTTACTGCAAAGTTTATCGAAAGCTGATCG
CATTGGGGGAAAATTGGATTTGAATTCTGCTTTTGTAACAGCCTCTGAAC
AATTCGACAAGTCATCAAAATCTGCTAAAGTTGTGCTCCCAATACTTGCC
GGCCAAGATTTGGACAGATCTGCCATCAACAAACAAGTGGAGAATCTGTT
AAAGCAAGACATTGTGGTGAAAACCGTTCTCCTCTCTGATGACGATAGTA
TTGACAGCTCCAAGAATGTTGGAGACACCTTGATCGTCAAAGATACAACT
TTCTTACCAAATGCAATTTCATTCATCTATCAATTCCTCACTAAAACTTC
AGCTTCACAAAACAAACTGGATGTTTTGCTGACTTTCATGACGTCACCGA
AATCAACCGACCAATCaatgaacaaaatgaaaatgctagCTTCGGAATTC
GTCACCAGACTTCCGCGCTCTCGGACACACACACGTCTCAACGTCTTAAC
ATATGATAACATTATAGACTGGAAGGGAACACGTGATTTATCACAGGCTA
AACTGTCAGAAGCAATCAAAGGATTGGACTTGAGAAAATCTCGCTCTGAC
ACTTCACTCGTCTTATTCACCAAAACAATCGATCAAGCATATTCAGATAA
TTCCCGCCCAGATGTTGATTCTGTTGTTATCGTTATCAGTGATGAAGCGc
caagtaaagaaatatcttccTATTTGAACGGATTGGCgcgcaaaaaaatt
aaagttgtCACGGTGATCATGAATGGAGGTGTGAAAGACTTGGGAGATGT
TGTCATCCACCCGGGCGTCGATATCATCACAGGCGGAGGAGAGGGCGGTA
AAATTGTTGTCGATGAAATTGAGGAAGCCATCAAGCTTCACAAAACAAAC
TGGATGTTTTGCTGACTTTCATGACGTCACCGAAATCAACCGACCAATCa
atgaacaaaatgaaaatgctagCTTCGGAATTCGTCACCAGACTTCCGCG
CTCTCGGACACACACACGTCTCAACGTCTTAACATATGATAACATTATAG
ACTGGAAGGGAACACGTGATTTATCACAGGCTAAACTGTCAGAAGCAATC
AAAGGATTGGACTTGAGAAAATCTCGCTCTGACACTTCACTCGTCTTATT
CACCAAAACAATCGATCAAGCATATTCAGATAATTCCCGCCCAGATGTTG
ATTCTGTTGTTATCGTTATCAGTGATGAAGCGccaagtaaagaaatatct
tccTATTTGAACGGATTGGCgcgcaaaaaaattaaagttgtCACGGTGAT
CATGAATGGAGGTGTGAAAGACTTGGGAGATGTTGTCATCCACCCGGGCG
TCGATATCATCACAGGCGGAGGAGAGGGCGGTAAAATTGTTGTCGATGAA
ATTGAGGAAGCCATCAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000165_pilon | genome | sc0000165_pilon:512101..515802 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2029-2559:3172 |
| Aaloc | 1294-2025:2270 |
| Aaloc | 745-1290:1522 |
| Aaloc | 538-741:1001 |
| Aaloc | 187-534:445 |
| Aaloc | 1-183:1 |
|
