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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000165_pilon:641042..644983+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037912 ID=XLOC_037912|Name=XLOC_037912|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3942bp|location=Sequence derived from alignment at sc0000165_pilon:641042..644983+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTTCCAAATCTTGGACTGCAAAAGTGGATGTTTTCAGGAATTGAC
CATCGTCAGTAAACTCGACAAGGGTGCATTTGGAGATGTTTACAAAGTGG
AGGATGCAAGAAAACATGTTTTCGCTTTAAGGAAAATGACCCCTGAACAT
TATTTAAATACAAAAAACAATAGCGCCTCGAATGATAAACTTTATCAGGA
TGTTGTTGGTAATTTGCTATATACCATGTCCTGCTTAAAACACCCTCATA
TTGTTCAATTGTATGCTTTCGATTTTGAAAGTACATCTACATTACTAGTT
ATGGAGTTTTGTCCTGGAGGAAACTTGAATAACCGATTACGTGACCCTGT
CAATATGAAACAAAAGTTTGACTGGATGTCACAATTACTGGAAGCAATGA
CTTACCTCCATAACAATAATTTTGTTCACAGAAACTTCAAACCTGAAAAT
GTGCTGCTTGGTAATAGAGGGCAGGCAAAAATGGCTGATTTTGGACTTGC
TCGACCGTTTTTAACGCgagatttgaaaaataacgaagatTACCTTTCAG
AATACGAAGACATGTTTATGGACAAATATGCAGGTACCATGTATTGGATT
GCTCCTGAAGTCTTTGATCGAAAATATACAGAAAAGGCTGACATTTTCTC
GCTTGGGGTGATATTCTATGCTATTTTGAcaaggaaatatttaacttaTC
AAGGTGAATCTTATTATTATGGTGCATTTGTGGAGCATCATGGGAAAGAA
GTTGGCCTTGGACTTGCTATGCATCGTTCTGAGAAAAACATTGAACCAAG
TTTCGAGGGATTGAAAGAGACAATAGAACAAGATATTGCAAACAATGTAA
TCAAAAGTCTGCTTTGTTATGATTACAATAAAAGAATGAGTCTAGACCAA
GCACACTCTTTCATTTTTGACGCACtcgctaaaattgaaaaacaatgcGA
GAAATCAGTACTTGAAGCAACAACGAATCCACCTGCAAGAAGGAAACCTT
CGGTAGCCGGCTATTTCTTTAGTAAGTATTTTGTGGGCGAGGTTTTCTTA
GGATACACGACATTTTGACATCTttaattaccttattttggggttatTTA
GACGtttgttaaaatttgaagatttttccaacccctcccACCATTTATGA
GACACCTGAGAGTAAGATGTTTGAGTAAGATGTTTAAACATCTTGAGAAC
AAGATGTGTTGTCTGTTTGGATTAGATATCTGGACGGGTTGGATGTATAC
TTTTTTGAGTTGAAAGTGACAGCTATGAGTATTAAGTACAAGGTATTTTG
TTTTAGAAATGGCATCCCATATTTTTCTTGATGATTAAAAAGAAGAACAA
GTTTCtagatacactttttttataagcttaacgtttataagcatacgtaG
GCTCactttttggtacctaaacaatggctctattgtttaagaacaatcgA
ATGCTAATCATAATGCGAGCCTCGTATAGGTGTAGAcgcttgcttataaa
aacaaagtgTTGGGGTCCCTTTTTGAAACCCCTAAAAAGGGGTTGATGGt
atttaagttttattttaaaatcgTGTTCTATGGAATCTATGGTCGTTTCT
TGTATTTATTGAAGAGAACATTGTGTACCAATAATTTGAAGTACTTTTAC
TGTAGAACAAAAAAGAAGCTAAAGTTTAGCTTGAATGATATATAATGCCC
GATGTCCGATTTTGAGCTTTGGCCTGGTCAAATAATAAAAGTCTCATTGT
ATACAGGGTgtctcgaaaaaaaatcatgtgTTAAAACATGACTAAAAGTA
GAAAAAACTCGTGTGTCTATGTCAAAATTAAGTATTTACGTTAGGGTTTC
ATTACACATTTTTTAGTACGTGTATTgattttatagttttaaaaaaatgt
tttattacagaattgatattttgattatgtttttataagtttgcTTCGTT
GTAACCATTTAAGTATtacttaaaggttttctacgggaataaaaggagct
tattttaggcagtgCCTTTATGTTGAGTCAGATAAAtaaaagctactttt
ttacgcaacgacatcctgcaaacaagtgaaagatcgaaagttgtttcgag
atgtgacctcacattctattgcttttgtaaacaaaaaatagcaaagttga
tttcaaacaaatttacaatcgaatgttttgattataagacgctctattta
ttataaacataaagcattcgaaagagtatcagtaaaagtccctttgtttg
agaaatgtttttttattcaatgtattttcattttttcaaaacctttttct
aatcttgtcgcgtttgtttttactacatcagcatcgtcagacctttcaat
caaaacaaaacctttaatgtgTTTGTGAGAAACATAAAAACTTTTCTACT
TGTAGTCGTGTTCTAACACAGGACtttttttCGGAACACCCTGTATGATA
TTTTCACCCTTTTAAGTTAATATttccttgtttgttttctttatttagag
CGTTTTGTACCGGGATTTGCTGCATGTTTCGACGAAGGGAAACATGTTGT
TGGGAATATCGAAAATACTGAACAAAAGGATGGAGAAGGAAATGTTCCTC
GTGAACCTTCTGATCGGCCTGGAAGTGAAAATGCgaatcaaaatatttgt
tctGTCTCATCTCAGAGTAGGTGGTCATTGTTTTCAATTATGCTCATATG
GGCTAATCTAAAGATCCTCATATCCTACATCTgtgtagtctacacaatag
acagatccaggcttttaggccttactcttggtctataggcactgctatag
gcggccactagtgacccccaccgggaattgcttattaatatgtttaaaca
taatagacaacattcacaaaagatgtttatcaatagagattttaaataaa
agaatgtttaaaacacagctgattggcttaggtttcgaaactctctattg
tttcattaaaacctcagtgcgcatgcgatttatctggagaatttcaatat
tcaaaacaagaggagtgctcatagcccgaagagtaggagttttacgctcg
aaacgaaggaagatatgacgtagcctaacaTCTGTGTTGTTATTTCTCCT
CATTTAACATTGAAATTTCACATGACTTGTTCGATTTGTTCACGACACTC
GCAGCCattcctttttctttcaaaaaatccatTTTCTTACTTTCATTCTC
TTCAAATCTTTCAGTAGAttcaaaaaatgatgttttgaaaaacttcGAAC
AACATTATTCCTGTCCTATTTGTTTGGACATCGTCTGCGAAGCAGTTGAG
TGTAAAGTTTGCCACAAGCTGTATTGCGATGAGTGTGTCCGAGAATTGAA
CACGTGTCCGAGCTGCCGCCAACCATTTAACACTCAGCCCAACAAAAATG
TCCGACAATTTATCGGGAATTTGAAAACGAAATGCCCAAACGAAGAATGC
CGTGAAAAACCAACTCGATCAAATCTTCAAGAACATTTAAAGAAATGTGA
ATGGGCGTTGACATTGTGTGAAAATGAAGGTTGTGAATTAGAATTTCGGA
GAATAGATTTGCCGAAACATCTTTTCGATTGTTCGTATCAGATCGTATTT
TGTAGATCGGTCGGCTGTAAAGAGTCGTTTCCCCGAAAGCgcttttttct
tcataaaaacgAGTGTTTGTTCTCTCCTGTCAGATGCTTGGATTGTTTGC
AGTTATATCTCAAAAAAGACGAAACCGTTCATTTTAAGATGTGCAAGCGC
AAGAAAATCGAATGTCCTATCTGTCAGCTTGAAGGAACGAGGTTGGACAT
TTTACATCATGGTGTAGATATACATTATGATAATGTGGTGACACCCTTCT
ACCAATCGATGGTGGTTTCTGCTTCGTCCTCAAGCCATCAACCAATATCG
CAAGAAGAGGACAGGTTATTCGCGGAGTTGGATTGTATTTGA Coding sequence (CDS) from alignment at sc0000165_pilon:641042..644983+ >XLOC_037912 ID=XLOC_037912|Name=XLOC_037912|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3834bp|location=Sequence derived from alignment at sc0000165_pilon:641042..644983+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTTCCAAATCTTGGACTGCAAAAGTGGATGTTTTCAGGAATTGAC
CATCGTCAGTAAACTCGACAAGGGTGCATTTGGAGATGTTTACAAAGTGG
AGGATGCAAGAAAACATGTTTTCGCTTTAAGGAAAATGACCCCTGAACAT
TATTTAAATACAAAAAACAATAGCGCCTCGAATGATAAACTTTATCAGGA
TGTTGTTGGTAATTTGCTATATACCATGTCCTGCTTAAAACACCCTCATA
TTGTTCAATTGTATGCTTTCGATTTTGAAAGTACATCTACATTACTAGTT
ATGGAGTTTTGTCCTGGAGGAAACTTGAATAACCGATTACGTGACCCTGT
CAATATGAAACAAAAGTTTGACTGGATGTCACAATTACTGGAAGCAATGA
CTTACCTCCATAACAATAATTTTGTTCACAGAAACTTCAAACCTGAAAAT
GTGCTGCTTGGTAATAGAGGGCAGGCAAAAATGGCTGATTTTGGACTTGC
TCGACCGTTTTTAACGCgagatttgaaaaataacgaagatTACCTTTCAG
AATACGAAGACATGTTTATGGACAAATATGCAGGTACCATGTATTGGATT
GCTCCTGAAGTCTTTGATCGAAAATATACAGAAAAGGCTGACATTTTCTC
GCTTGGGGTGATATTCTATGCTATTTTGAcaaggaaatatttaacttaTC
AAGGTGAATCTTATTATTATGGTGCATTTGTGGAGCATCATGGGAAAGAA
GTTGGCCTTGGACTTGCTATGCATCGTTCTGAGAAAAACATTGAACCAAG
TTTCGAGGGATTGAAAGAGACAATAGAACAAGATATTGCAAACAATGTAA
TCAAAAGTCTGCTTTGTTATGATTACAATAAAAGAATGAGTCTAGACCAA
GCACACTCTTTCATTTTTGACGCACtcgctaaaattgaaaaacaatgcGA
GAAATCAGTACTTGAAGCAACAACGAATCCACCTGCAAGAAGGAAACCTT
CGGTAGCCGGCTATTTCTTTAATGTCTTTCCAAATCTTGGACTGCAAAAG
TGGATGTTTTCAGGAATTGACCATCGTCAGTAAACTCGACAAGGGTGCAT
TTGGAGATGTTTACAAAGTGGAGGATGCAAGAAAACATGTTTTCGCTTTA
AGGAAAATGACCCCTGAACATTATTTAAATACAAAAAACAATAGCGCCTC
GAATGATAAACTTTATCAGGATGTTGTTGGTAATTTGCTATATACCATGT
CCTGCTTAAAACACCCTCATATTGTTCAATTGTATGCTTTCGATTTTGAA
AGTACATCTACATTACTAGTTATGGAGTTTTGTCCTGGAGGAAACTTGAA
TAACCGATTACGTGACCCTGTCAATATGAAACAAAAGTTTGACTGGATGT
CACAATTACTGGAAGCAATGACTTACCTCCATAACAATAATTTTGTTCAC
AGAAACTTCAAACCTGAAAATGTGCTGCTTGGTAATAGAGGGCAGGCAAA
AATGGCTGATTTTGGACTTGCTCGACCGTTTTTAACGCgagatttgaaaa
ataacgaagatTACCTTTCAGAATACGAAGACATGTTTATGGACAAATAT
GCAGGTACCATGTATTGGATTGCTCCTGAAGTCTTTGATCGAAAATATAC
AGAAAAGGCTGACATTTTCTCGCTTGGGGTGATATTCTATGCTATTTTGA
caaggaaatatttaacttaTCAAGGTGAATCTTATTATTATGGTGCATTT
GTGGAGCATCATGGGAAAGAAGTTGGCCTTGGACTTGCTATGCATCGTTC
TGAGAAAAACATTGAACCAAGTTTCGAGGGATTGAAAGAGACAATAGAAC
AAGATATTGCAAACAATGTAATCAAAAGTCTGCTTTGTTATGATTACAAT
AAAAGAATGAGTCTAGACCAAGCACACTCTTTCATTTTTGACGCACtcgc
taaaattgaaaaacaatgcGAGAAATCAGTACTTGAAGCAACAACGAATC
CACCTGCAAGAAGGAAACCTTCGGTAGCCGGCTATTTCTTTAagCGTTTT
GTACCGGGATTTGCTGCATGTTTCGACGAAGGGAAACATGTTGTTGGGAA
TATCGAAAATACTGAACAAAAGGATGGAGAAGGAAATGTTCCTCGTGAAC
CTTCTGATCGGCCTGGAAGTGAAAATGCgaatcaaaatatttgttctGTC
TCATCTCAGAagCGTTTTGTACCGGGATTTGCTGCATGTTTCGACGAAGG
GAAACATGTTGTTGGGAATATCGAAAATACTGAACAAAAGGATGGAGAAG
GAAATGTTCCTCGTGAACCTTCTGATCGGCCTGGAAGTGAAAATGCgaat
caaaatatttgttctGTCTCATCTCAGATAGAttcaaaaaatgatgtttt
gaaaaacttcGAACAACATTATTCCTGTCCTATTTGTTTGGACATCGTCT
GCGAAGCAGTTGAGTGTAAAGTTTGCCACAAGCTGTATTGCGATGAGTGT
GTCCGAGAATTGAACACGTGTCCGAGCTGCCGCCAACCATTTAACACTCA
GCCCAACAAAAATGTCCGACAATTTATCGGGAATTTGAAAACGAAATGCC
CAAACGAAGAATGCCGTGAAAAACCAACTCGATCAAATCTTCAAGAACAT
TTAAAGAAATGTGAATGGGCGTTGACATTGTGTGAAAATGAAGGTTGTGA
ATTAGAATTTCGGAGAATAGATTTGCCGAAACATCTTTTCGATTGTTCGT
ATCAGATCGTATTTTGTAGATCGGTCGGCTGTAAAGAGTCGTTTCCCCGA
AAGCgcttttttcttcataaaaacgAGTGTTTGTTCTCTCCTGTCAGATG
CTTGGATTGTTTGCAGTTATATCTCAAAAAAGACGAAACCGTTCATTTTA
AGATGTGCAAGCGCAAGAAAATCGAATGTCCTATCTGTCAGCTTGAAGGA
ACGAGGTTGGACATTTTACATCATGGTGTAGATATACATTATGATAATGT
GGTGACACCCTTCTACCAATCGATGGTGGTTTCTGCTTCGTCCTCAAGCC
ATCAACCAATATCGCAAGAAGAGGACAGGTTATTCGCGGAGTTGGATTGT
ATTTGATAGAttcaaaaaatgatgttttgaaaaacttcGAACAACATTAT
TCCTGTCCTATTTGTTTGGACATCGTCTGCGAAGCAGTTGAGTGTAAAGT
TTGCCACAAGCTGTATTGCGATGAGTGTGTCCGAGAATTGAACACGTGTC
CGAGCTGCCGCCAACCATTTAACACTCAGCCCAACAAAAATGTCCGACAA
TTTATCGGGAATTTGAAAACGAAATGCCCAAACGAAGAATGCCGTGAAAA
ACCAACTCGATCAAATCTTCAAGAACATTTAAAGAAATGTGAATGGGCGT
TGACATTGTGTGAAAATGAAGGTTGTGAATTAGAATTTCGGAGAATAGAT
TTGCCGAAACATCTTTTCGATTGTTCGTATCAGATCGTATTTTGTAGATC
GGTCGGCTGTAAAGAGTCGTTTCCCCGAAAGCgcttttttcttcataaaa
acgAGTGTTTGTTCTCTCCTGTCAGATGCTTGGATTGTTTGCAGTTATAT
CTCAAAAAAGACGAAACCGTTCATTTTAAGATGTGCAAGCGCAAGAAAAT
CGAATGTCCTATCTGTCAGCTTGAAGGAACGAGGTTGGACATTTTACATC
ATGGTGTAGATATACATTATGATAATGTGGTGACACCCTTCTACCAATCG
ATGGTGGTTTCTGCTTCGTCCTCAAGCCATCAACCAATATCGCAAGAAGA
GGACAGGTTATTCGCGGAGTTGGATTGTATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000165_pilon | genome | sc0000165_pilon:641042..644983 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1192-1917:3217 |
| Aaloc | 1024-1188:2501 |
| Aaloc | 1-1020:1 |
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