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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000165_pilon:646735..648635+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037911 ID=XLOC_037911|Name=XLOC_037911|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1901bp|location=Sequence derived from alignment at sc0000165_pilon:646735..648635+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACCGGCGAAGAACATGAACTGATTATTTTCAAACATGGTAACCA
TACAACAGAGTTGACCGTCCTCCAAGAGTTGGGTCGTGGTGCATTCGGAC
AAGTTTTGCTCACACTTGACCCTGGCGGAAAACGTTTCGCGGTGAAAAAA
GTCGAATGCAAAGATGCGAACACGTATTATACGATCGCCCAAGAGTTGTC
GGTGCTTACCGAACTTCAACACCCGAATATCATTCGGATGTATTCGGTGG
ATTTCGAATTGAACATGTGTTATTTTGTAATGGAATATTGTCCAAATGGA
ACACTTAATGACCGTTTAAAACAACCGGTAACCGAGATCTCCCAGTTTCT
ATGGATGTCGCAATTAACAAGAGCTCTGTTTTATTTACACCAGAATAAAA
TTGTTCATCGAGATTTAAAACCAGAGAACGTTCTCTTGAAAAGTGAAGAT
GAGTTGAAATTAGCGGATTTCGGAATCGCCAAAAAGTTTTACGGTTTATC
GAGAGGGCGTTTTCCAGATCAAATGGCACCCAACGAGTATTTGTCAGATT
ACTTGGAAGGTGATACCCGAATGGGAACATTCGCCGGAACACCGTACTGG
GTATCACCGGAAGTTTTCAACCACAATTATGATGAAAAGGCGGATGTCTT
TTCATTGGGCGGAAttttttacgccattctttttcgaagttcgttttatt
atgacgggaaggaattttttggtgtttttgtaaAAGATCGGTATGGAAAG
GAAAAAGGATTGGGTCTAGCCATGTTTGAAGAGGAGGCTGAGATTGACCC
ATTTGACGCCAATCACTTTGCtaatgaaaatgttgatgacgatttgaaga
aaattgttcGAAAAATGTTAAGTTATGATACAAGTCAAAGGGCGAGCATG
AAAGAATGTTCCCACGAAATCGATAAAGCTTTCAACAAATTCACTGGTCT
GTCAAGTGAAAGTGCTGCTGCTTGTATAGAAAGAGAAACTAAGGAGAAAC
CTTACCCCCGACAGCCGTCTTCATCGACACGAAAACGAACCAAAAATCCT
TCAACCAGTAGCACTGCTATGGAGGGTCATATCGAACATTTTGCTGAATT
TAACGAGAAAGACCCTTTCATGAAGGAACAGAAAGAGGCTGAAGAAGATA
TGGAGAATGGAGGGTGTCTTGTGGGTTGCCAACAACACACTGTCCAAGGA
TGTCGGTGGTACTTGGGTTGCATGCTCGACTTATTTGGTAAGTATTTTAT
TGGTTTCCACACATAGGGCGTCTGGTCACTTAGACTTCATTAGACCTTTT
CATAGGAAAGACATTGatcaagtcataaaatttcaattctGAAAAAGTGA
ATGTCAGTTTCCATAAACATTTGGAAGTCTTGAATTAATTACGAAAATGT
CTGAAAAATAAACTTCTCTACAGGGGAGGGACTGCAGACGCAGGATACTA
ACCTATAGGCTATTAACCttggttttcagaaaaagtTGTCTTATCACCAG
CCAttttttagtaccgggtacaaACTTTTTGTGAGAACAAAAGGGACGGG
GATTTTCAAACGTTGGAAGTTCGGACAATTTAAGTTCGGATGCAATTTAA
TGTTCATTAATGTTATTTGTTACTAATTATCAAGAAAGAAACTTTGTTCT
GATTAGAGTCTTATCTCTAGTTTAGGTAtaatcttatttctttttttatg
atttttgttggcgccaataagtttatacctaaactatcTTATCTCTGTAA
TAATACCTATCCGAATCACTATTTTTCTGCAGGCTGTCAGAAGAAACGGG
ATGAAGGCGATCAAgatgaacaaatttttccagTCGATGAACATATGTAT
AAAGAGCATGTTAACGTCAATGAAACCTCTCGTAAGCCTTTGCTTCATTG
A Coding sequence (CDS) from alignment at sc0000165_pilon:646735..648635+ >XLOC_037911 ID=XLOC_037911|Name=XLOC_037911|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2712bp|location=Sequence derived from alignment at sc0000165_pilon:646735..648635+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACCGGCGAAGAACATGAACTGATTATTTTCAAACATGGTAACCA
TACAACAGAGTTGACCGTCCTCCAAGAGTTGGGTCGTGGTGCATTCGGAC
AAGTTTTGCTCACACTTGACCCTGGCGGAAAACGTTTCGCGGTGAAAAAA
GTCGAATGCAAAGATGCGAACACGTATTATACGATCGCCCAAGAGTTGTC
GGTGCTTACCGAACTTCAACACCCGAATATCATTCGGATGTATTCGGTGG
ATTTCGAATTGAACATGTGTTATTTTGTAATGGAATATTGTCCAAATGGA
ACACTTAATGACCGTTTAAAACAACCGGTAACCGAGATCTCCCAGTTTCT
ATGGATGTCGCAATTAACAAGAGCTCTGTTTTATTTACACCAGAATAAAA
TTGTTCATCGAGATTTAAAACCAGAGAACGTTCTCTTGAAAAGTGAAGAT
GAGTTGAAATTAGCGGATTTCGGAATCGCCAAAAAGTTTTACGGTTTATC
GAGAGGGCGTTTTCCAGATCAAATGGCACCCAACGAGTATTTGTCAGATT
ACTTGGAAGGTGATACCCGAATGGGAACATTCGCCGGAACACCGTACTGG
GTATCACCGGAAGTTTTCAACCACAATTATGATGAAAAGGCGGATGTCTT
TTCATTGGGCGGAAttttttacgccattctttttcgaagttcgttttatt
atgacgggaaggaattttttggtgtttttgtaaAAGATCGGTATGGAAAG
GAAAAAGGATTGGGTCTAGCCATGTTTGAAGAGGAGGCTGAGATTGACCC
ATTTGACGCCAATCACTTTGCtaatgaaaatgttgatgacgatttgaaga
aaattgttcGAAAAATGTTAAGTTATGATACAAGTCAAAGGGCGAGCATG
AAAGAATGTTCCCACGAAATCGATAAAGCTTTCAACAAATTCACTGGTCT
GTCAAGTGAAAGTGCTGCTGCTTGTATAGAAAGAGAAACTAAGGAGAAAC
CTTACCCCCGACAGCCGTCTTCATCGACACGAAAACGAACCAAAAATCCT
TCAACCAGTAGCACTGCTATGGAGGGTCATATCGAACATTTTGCTGAATT
TAACGAGAAAGACCCTTTCATGAAGGAACAGAAAGAGGCTGAAGAAGATA
TGGAGAATGGAGGGTGTCTTGTGGGTTGCCAACAACACACTGTCCAAGGA
TGTCGGTGGTACTTGGGTTGCATGCTCGACTTATTTGATGGCAACCGGCG
AAGAACATGAACTGATTATTTTCAAACATGGTAACCATACAACAGAGTTG
ACCGTCCTCCAAGAGTTGGGTCGTGGTGCATTCGGACAAGTTTTGCTCAC
ACTTGACCCTGGCGGAAAACGTTTCGCGGTGAAAAAAGTCGAATGCAAAG
ATGCGAACACGTATTATACGATCGCCCAAGAGTTGTCGGTGCTTACCGAA
CTTCAACACCCGAATATCATTCGGATGTATTCGGTGGATTTCGAATTGAA
CATGTGTTATTTTGTAATGGAATATTGTCCAAATGGAACACTTAATGACC
GTTTAAAACAACCGGTAACCGAGATCTCCCAGTTTCTATGGATGTCGCAA
TTAACAAGAGCTCTGTTTTATTTACACCAGAATAAAATTGTTCATCGAGA
TTTAAAACCAGAGAACGTTCTCTTGAAAAGTGAAGATGAGTTGAAATTAG
CGGATTTCGGAATCGCCAAAAAGTTTTACGGTTTATCGAGAGGGCGTTTT
CCAGATCAAATGGCACCCAACGAGTATTTGTCAGATTACTTGGAAGGTGA
TACCCGAATGGGAACATTCGCCGGAACACCGTACTGGGTATCACCGGAAG
TTTTCAACCACAATTATGATGAAAAGGCGGATGTCTTTTCATTGGGCGGA
Attttttacgccattctttttcgaagttcgttttattatgacgggaagga
attttttggtgtttttgtaaAAGATCGGTATGGAAAGGAAAAAGGATTGG
GTCTAGCCATGTTTGAAGAGGAGGCTGAGATTGACCCATTTGACGCCAAT
CACTTTGCtaatgaaaatgttgatgacgatttgaagaaaattgttcGAAA
AATGTTAAGTTATGATACAAGTCAAAGGGCGAGCATGAAAGAATGTTCCC
ACGAAATCGATAAAGCTTTCAACAAATTCACTGGTCTGTCAAGTGAAAGT
GCTGCTGCTTGTATAGAAAGAGAAACTAAGGAGAAACCTTACCCCCGACA
GCCGTCTTCATCGACACGAAAACGAACCAAAAATCCTTCAACCAGTAGCA
CTGCTATGGAGGGTCATATCGAACATTTTGCTGAATTTAACGAGAAAGAC
CCTTTCATGAAGGAACAGAAAGAGGCTGAAGAAGATATGGAGAATGGAGG
GTGTCTTGTGGGTTGCCAACAACACACTGTCCAAGGATGTCGGTGGTACT
TGGGTTGCATGCTCGACTTATTTGGCTGTCAGAAGAAACGGGATGAAGGC
GATCAAgatgaacaaatttttccagTCGATGAACATATGTATAAAGAGCA
TGTTAACGTCAATGAAACCTCTCGTAAGCCTTTGCTTCATTGAGCTGTCA
GAAGAAACGGGATGAAGGCGATCAAgatgaacaaatttttccagTCGATG
AACATATGTATAAAGAGCATGTTAACGTCAATGAAACCTCTCGTAAGCCT
TTGCTTCATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000165_pilon | genome | sc0000165_pilon:646735..648635 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1240-1356:1785 |
| Aaloc | 1-1236:1 |
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