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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000032_pilon:1813414..1816986- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037890 ID=XLOC_037890|Name=XLOC_037890|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3573bp|location=Sequence derived from alignment at sc0000032_pilon:1813414..1816986- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATAGTAAACCTTGGCGAGGAGGTCGAGGTTCAAGAAGGATGTCTAC
TGAGGATTCGACTGAGGATTTGATCTCCAAACAGAATGATAGTGGTGATA
GACAACGTTTAAATATTGATGATAATGATACATCTATTGATATCAAAATC
CCAAGAGACAATACGTATAATCGACCGTGGCGTAAGAAAACCGTTAACGT
ATCGTTCCTGGTTTTATCGATTGTGTTTTTATTAATAGCCGTTGTGTTTA
TATGTTTATATTTCCATCAAAAAGATTTATTAGACTTTTACAAGAATAAG
GAGAAGTCGTCGTCGTCGCACGTTAAGCCGACGCATGCACCGAACTGTAC
GGACAATGTTTGCGTGACGCCGGGCTGCGTTGAAGCGGCTGCTTTTATGC
AGGCTGCCATGGACACTACGATAAATCCGTGTGACGATTTTTATTTATAT
TCTTGCGCCGGATGGATAAAACGTAACCCGATTCCGGACGGCGAGTCGGC
TTGGGATACGATATCGGTGGTAATGAAGCGTAACCAACGTATACTTAAAG
ACATTTTAGAAGATCCACGCGTTAAGAAGGCGACAGACGTTACTAGCGTT
GCCGAACACAACGCATATAAAATCTTCCGTAGCTGTAAGAACTTGAAACG
TATAAATAAACAGGGTATACAGCCTCTCGTATCTCTAATGAACGACGTTA
CAAATTTCGTCACGCTAAACTCTACAGACACGTTACGGCATAAGACTTTG
ATGAGTTTGTTCACAACCCTTTACAAACAAACTCGTATGCAACCGTTCTT
CAGTATCTCAGTCGGTCATGATGATAAAGACTCTTCCAAAAATATTTTAC
AGGTAATTAACATTTTGGTAAAAATCTACTTTGTCTAAACAGTCGTAAAA
GGCTTTATCTTAGAAAAAGGTCTTTCAAAATACTTTAATCCTAATTTTAC
TGCTTTTGGGTATTTTCACCACTTCACCAAGAGCTGTACAACTTTCCATT
ATAACGTTTGTTCTAATAATAATACTTACGTTTTGGCTTTAATTTTGGAC
TTGCCAATCTTTTTGAACTTTTGAGAACTTAATCAACCATTGTTTCTCTT
AAACCTTCGAGGATCTTATAGCTTGCGATCTGTGCAATTTTTAAAGTCGA
AAAATTTCTCTCTCTCTTAATAGTTTTACCAATCTGGTATCACAATGGCG
CCTTACATTTATGACGAAAAAACGAACCAAAGTAAACAGATCGTTGAAGA
ATCCATCAAATATATGGTAGCATTGGGATCAAAGATTGATCATGATTTCG
CGACGGTGGAAGAACTCCGCGAGATGGCCAACGATGTGTATGAATTTGAG
AAGAGCTTGAAACAGGTAAGATTTGTTTATTTTGCATCGAAATTTTGATT
TTCTCTGACATTGGCCTATATATTCTTTTTAGTAATTTATGAGTATCGTC
CCTAGGGTAGTTCTCCGCTCCGCTTCATATTGCTAAGCCTAATGATTCAC
TACACTGGGAATCATGTCTGCACCCAATAGCATTTCATCGAGTCTCTATA
GGAAATTGTTTTTCTGTTAGAATCGTCCCTAGGGTAGTTCTCCGTTCCGC
TTCATATTGCTAAGCCTAATGATTCACTACACTGGGAATCATGTTTGCAT
CCAATAGCATTTCATCGAGTCTCTATAGGAAATTGTTTTTCTGTGAGCAT
CGTACCTAGGGTAGTCCTCCGTTTTGCTTCATAATCTTAAACTTGCTGAA
GCACTACATTGGGAGTCATGTTAGCATTTCTACGAGTCTCTACAGAAAAT
TGTATTTTTCCCATATCATAGTTGTTGACTTTGCAAAGTTGTTTTGTCGA
AGGTGTACAGTATCATTATCTCGTAATTAGTATGCTAAATAGAACGGATT
ATCCTTCGTTCATCTGCGAGGAGTCTGTCAGCTCATCCCTTCAAATTGTC
AGGTTGTCTAAAATCGTTGTTTACGCGTTTATGAGAATATACAGCTGGTG
CTCTCTAATTCGACATTCATAATTCGATACGCTCCATAATTCCCCTTAAA
AATCAAATCAGAGAGCGTCAACTATGTTATTTTACTTAAGCCGTGACACA
TTCTGCTTTTTAAAGTGACTTGCTGCTCGCATGCGGCATCTATAAAGAGG
AATAGGCCCCTAGTCAGCCCTGTTTTTATCAAATTCAATGTTCTTTTACA
ATGGTTAATAAGAGAGTTCTGTAAACTGGAGGTGCTATCAGTCATAACTT
AGGCTGGAAATCACCACTTTTTTTAGTGTCAAAAACATGAAACTTTCGTT
AACTCTGCTTGTAGAAACTTGGCTCGGCTCCTGGATATAAATATCACTTT
GCACTGGAATACTAGACATCAATCAAAGTTACATAGCGCAACCCTCCCCC
CAAATGTCACCCAAAAAATTACAAACGTAAACTGGGAGCTAAAATACAGC
CAAATATTTGGGTGGGGGGCTGGAATTTTAATGGCAAGGCTGGGGCTGAC
TATTTCTTCTATTATTTTTCTTTATATTACCACATTTTTATCCAAAAACC
TTTCATTTTACAGTCTATTAATTCTGTTTGTTTTCACTTATGTCTACCAT
TTTGAATTAACTATTATAGTCAATAGAATATAAATGTGATTTTCCTAAAA
ACGATATTAAATCAACACATGTTTTATACTAGATATAGGACTGGAGCTGC
TTAAAAAACTTTTAATATTTGGGGGACCTAAATCTTTGCGGGGGTCCTAT
TTTTTTGCCTGGGGCCTAGACATGGGGTGACCCTATGAAGTTAAATATTC
TTGTTAAGCATTTCATGTACAACATTTAACTCCGTTGTCAGTGACATTAT
GTACATAGAGACAAATTATGAGATCACAAGCTGACTCATCCGTCAATCAA
AAGACAGTGATAAGCATCTCAAATACCTTCCTTTATCACGTCTCATTAAG
AGTAATTAAGACTTATTAAGCCTGATTAATGATGTGCCATATGAATTCAC
TATAAATATATCTAGTAGTTCTGGAAATAAGTATTTCTTTAACTGGGAAG
GCTATTTTTAACGTGTTTTCATATTTTAAATTAACTTTGTCAGAGACCCT
CCTTTTTTCGAGTAAACAACCTTTTTTAATCTTTTGGCTGAAATTTCATT
AATTCCGAGTGTATAGGTCCTTCATTTCGACTATTTGTGTACATAAAATA
GTGCCACGCGACCCCTTCTTTTTAAGATCGCGTCGAGAATACCTTTGATC
CCTTTTTGTAAAACTACGGACTTTTATATTATGAAAGAATTTTCCCACCG
GCCTTGAAACGAGGAAGTGTCTGAGAACGTTTGTGCAATTTTGAAAAGAT
TGAAAAGAGCTCAAAAATTAAATTCAAATGCAATTAACTGCCCATTGAAA
ACAGACATAGAATTAATACACAAATCATAAAATGAATATTATGATCCTCC
TACTTCCATTTTGTTTCGAGATTTCTTCAATTTCATTTTCAACAAATCTT
TCTACAGATATACGTTCCACCTGAGAAATTGGTGACCATCGACCAAATGT
ATCATAAAACGACACTCAAGGAG Coding sequence (CDS) from alignment at sc0000032_pilon:1813414..1816986- >XLOC_037890 ID=XLOC_037890|Name=XLOC_037890|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000032_pilon:1813414..1816986- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATAGTAAACCTTGGCGAGGAGGTCGAGGTTCAAGAAGGATGTCTAC
TGAGGATTCGACTGAGGATTTGATCTCCAAACAGAATGATAGTGGTGATA
GACAACGTTTAAATATTGATGATAATGATACATCTATTGATATCAAAATC
CCAAGAGACAATACGTATAATCGACCGTGGCGTAAGAAAACCGTTAACGT
ATCGTTCCTGGTTTTATCGATTGTGTTTTTATTAATAGCCGTTGTGTTTA
TATGTTTATATTTCCATCAAAAAGATTTATTAGACTTTTACAAGAATAAG
GAGAAGTCGTCGTCGTCGCACGTTAAGCCGACGCATGCACCGAACTGTAC
GGACAATGTTTGCGTGACGCCGGGCTGCGTTGAAGCGGCTGCTTTTATGC
AGGCTGCCATGGACACTACGATAAATCCGTGTGACGATTTTTATTTATAT
TCTTGCGCCGGATGGATAAAACGTAACCCGATTCCGGACGGCGAGTCGGC
TTGGGATACGATATCGGTGGTAATGAAGCGTAACCAACGTATACTTAAAG
ACATTTTAGAAGATCCACGCGTTAAGAAGGCGACAGACGTTACTAGCGTT
GCCGAACACAACGCATATAAAATCTTCCGTAGCTGTAAGAACTTGAAACG
TATAAATAAACAGGGTATACAGCCTCTCGTATCTCTAATGAACGACGTTA
CAAATTTCGTCACGCTAAACTCTACAGACACGTTACGGCATAAGACTTTG
ATGAGTTTGTTCACAACCCTTTACAAACAAACTCGTATGCAACCGTTCTT
CAGTATCTCAGTCGGTCATGATGATAAAGACTCTTCCAAAAATATTTTAC
AGATGAATAGTAAACCTTGGCGAGGAGGTCGAGGTTCAAGAAGGATGTCT
ACTGAGGATTCGACTGAGGATTTGATCTCCAAACAGAATGATAGTGGTGA
TAGACAACGTTTAAATATTGATGATAATGATACATCTATTGATATCAAAA
TCCCAAGAGACAATACGTATAATCGACCGTGGCGTAAGAAAACCGTTAAC
GTATCGTTCCTGGTTTTATCGATTGTGTTTTTATTAATAGCCGTTGTGTT
TATATGTTTATATTTCCATCAAAAAGATTTATTAGACTTTTACAAGAATA
AGGAGAAGTCGTCGTCGTCGCACGTTAAGCCGACGCATGCACCGAACTGT
ACGGACAATGTTTGCGTGACGCCGGGCTGCGTTGAAGCGGCTGCTTTTAT
GCAGGCTGCCATGGACACTACGATAAATCCGTGTGACGATTTTTATTTAT
ATTCTTGCGCCGGATGGATAAAACGTAACCCGATTCCGGACGGCGAGTCG
GCTTGGGATACGATATCGGTGGTAATGAAGCGTAACCAACGTATACTTAA
AGACATTTTAGAAGATCCACGCGTTAAGAAGGCGACAGACGTTACTAGCG
TTGCCGAACACAACGCATATAAAATCTTCCGTAGCTGTAAGAACTTGAAA
CGTATAAATAAACAGGGTATACAGCCTCTCGTATCTCTAATGAACGACGT
TACAAATTTCGTCACGCTAAACTCTACAGACACGTTACGGCATAAGACTT
TGATGAGTTTGTTCACAACCCTTTACAAACAAACTCGTATGCAACCGTTC
TTCAGTATCTCAGTCGGTCATGATGATAAAGACTCTTCCAAAAATATTTT
ACAGTTTTACCAATCTGGTATCACAATGGCGCCTTACATTTATGACGAAA
AAACGAACCAAAGTAAACAGATCGTTGAAGAATCCATCAAATATATGGTA
GCATTGGGATCAAAGATTGATCATGATTTCGCGACGGTGGAAGAACTCCG
CGAGATGGCCAACGATGTGTATGAATTTGAGAAGAGCTTGAAACAGTTTT
ACCAATCTGGTATCACAATGGCGCCTTACATTTATGACGAAAAAACGAAC
CAAAGTAAACAGATCGTTGAAGAATCCATCAAATATATGGTAGCATTGGG
ATCAAAGATTGATCATGATTTCGCGACGGTGGAAGAACTCCGCGAGATGG
CCAACGATGTGTATGAATTTGAGAAGAGCTTGAAACAGATATACGTTCCA
CCTGAGAAATTGGTGACCATCGACCAAATGTATCATAAAACGACACTCAA
GGAGATATACGTTCCACCTGAGAAATTGGTGACCATCGACCAAATGTATC
ATAAAACGACACTCAAGGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000032_pilon | genome | sc0000032_pilon:1813414..1816986 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1045-1110:67 |
| Aaloc | 853-1044:2401 |
| Aaloc | 1-852:3574 |
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