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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:242630..248193+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037846 ID=XLOC_037846|Name=XLOC_037846|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5564bp|location=Sequence derived from alignment at sc0000080_pilon:242630..248193+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGACAGAAGCGGATATAAGCATCCATCATAAACCATTAAAAACACA
TAAAGAATTAGTGGAAGAATTTTACTCTGGCATAACTCTTCATGGATTTC
GATTTCTCTTTGAAGGTACAAACTATCGCCGCGTCACCTGGTTCATAATC
TGTTCAGCAGTATTTGCTTTCTCAATTTACCTTTTCGAAAGTCTTCTAAA
TGACTACCTTGCTCATAAAGTTAATACCAGCATTAGCCGTAGATACGCTA
CTGGAAAGTTTGACTTTCCAACTATCGTTATATGCCCTTTAGGTAAGGCT
ATATCATCAACAAAATATGACAACTATCCAATTGATATTGGAATCGATGa
tcttaaaaatttgaaaagatatcTTTCGTCAGGCAATAAGGAGAAGGACC
ACAACAGCAGCAACACAGCCCGTTTCATTCAGGATTTGATTCAAAAAGGG
ATTGATACGAAAACAAAGTTTATCAACTCTTACAATCTTCCgtttgaaga
aattttccaaTCAGACGTGTTGGAACATTTAGAACCAGCAGGAAGCTGTG
ACTTTTATGATCAAAAATGTAACAGCTCTTGGTTCACAGCTCGTTACATT
CAAGGAggtaacaattttttttgcggtATGTGAAATAGTtactaacctga
taacagatgtggAGTTTTTGTAACATTTACATTGAATTTCAGAAAGATGC
TGAACTAACTGACGATCTATGTAGAGGTGAAAATACACAATCTGTTCTCA
AGTTAGTTAGCCCTGGAAAAGTTGGTAGTGTTAAATTTGTGTGAATTCTC
TTCTGACTTAAAGATggataaaccagctgcgctggaaagtcagccaAGAA
AGCTTAGAAATGATTAAGACGAAGTATAAATAAAAATCTGAGCTCACCTT
ACAATATTTGCTTGGAACGTTTCAGACGAAAAATGACTTGCACACAGTGG
AATCCGTCCGAATCAGAAGTTAGAAGGCAAATTTATCTCACCTTaggaaa
tgggcttttccagaaaaaaaccgtataccccctgttgaggaggtccatCA
TTTTGTGGCTGGAAATGCTGTAACCCTCTGGAATTCCAGGCAATTTCAGG
TTTAAACCCCTCTGGAATTCTGAATTTTAGTAGGATTTAAAAGGCTACCC
CCATGGAATTCCAGTTATTTTTGACAGATTTTTGTATCTCCCTATGGAAT
TCCGCCACACATCAAACCTTACCCCCTTGGAACGGAAatggacctcctca
acagggggtatacggtttttttctggaaaagcccaattagaACGAAATCA
TTTTATCATCCTTTGGCCTTTTGACAGCTTTCACATATACTTGGGTTGTA
TACGGAGGCCCATTAGTACCATTTAGATTATCCTTTAGTTTTTTAAcgac
gaaactaaaaaaaatgacgacgaaactaaaaataaattgTTGCTTCGTTT
TGTCGTcgaacaaatttacaacgaaactaaaaaattgacgacgaaactga
aaataaattgaaaatggtggccctgatGGTTTCAATATGCAAATATCATT
GATTCTGGCGGATTCTGAAGATGGATTTGatagttctggtgaatgcaatc
cTGGTGAAGATGGTTCTTGTGAATGAGAAACAAACTAGAATAAGTATGTG
ATGGTGGAGATTGTTGGAATCACCAGTGTCATTGGAATCATTTGAactaa
tcaatgatgaaatgaatggtgcaaatgatggaatcaatggtgcaaatgat
ggaatcaatggtgcaaatgatgaaaaCAATAGTGCAAATTATGGAATCAA
TAgtgcaaatgatggaatcaatggtgcaaattATGGAATCAATAgtgcaa
atgatggaatcaatggtgcaaatgatggaatcaatggtgcaaatgatgga
atcaatggtgcaaatgatggaatcaatgagtgcaaatgatggaatcaatg
gtgcaaatgatggaatCCATTGTGCGGGTGATAGAACCAACCATTGATTT
TATCATTTGCACTattcatttcatcattgattatttcCAATGATTCCAAT
GACACTGGTGATTCCAACAATCTCCACCATCACATACTTATTCTAGTTTG
TCATTGCCAGCATCTCATTCATAAGAACCATCTTCACCagcattgcattc
accagaactatCAAATCCATCTTTAGAATCCACCAGAATCAACGATATTT
GCATTTTGAAACCATtagggccaccattttcaatttttttttagtttcgt
tgTCAGTTTTTTCAACGACGAAACGAaatgataatttattttcagtttcg
tCGTCAATTTCTCAGTTTCGTCGtcacactgggcgaaataagagatttcc
aatcctggaaatatcttgaaaatatgatatttcaatatacttttgtaaat
atggaaatatgacttttctatatttccaaagttgtggaaatgtcatattt
catgatatttccaaatctaaaatatcacattttcaaaatatttccaactt
ttggtaatattttgataatatgatgtttcaatgaatttcagatttggaaa
tatcatgaaatatgatatttccacaactttggaaatataaaaaagtcata
tttccatatttacaaaagtatatggaaatatcatattttcaagatatttc
caggattggaaatctcttatttcgcccagtgcaattttttaagttcgtcg
tcaaTttttttagtttcgtcgttaaaaaattaaaggaaaatCTAAATGGC
ACTAATGGGCTTCCGTAGTTGTAAGTTAACCGGTTTGTGCTTCCCGACGG
ATCCTTACAGCAGGACTAAAACGgaggaaaaaaggaaatttttttgaatt
cgaATACTTTTATTGAGActtatttgaccaaatttcgatctttctgggga
aaaaaagttaaacattttcctatttttcctggGATTGAAATCTAAGTTTC
TGATTTTCCTACCCTTTCAGGTACTGCAACGTTCCAAAAAAGCATCAAGG
GGCAGCACATCCGTACTATCCGTGCACTTGCCTAAGTAGCCcgtaaattt
tatgaaaataaatcttATCGGAGAtttttttgcattgtgggattgttttg
ggggtataatataacaatagaaatctcttaagaattcctcgagggaaatc
tattgtaatacccccgaaacaatcccacaatgcatcgctgttttagaaaa
attAaaaactccgataaggtctattgccaGAGCTCTGAGTGTTCCAAATA
CAGGtttttcttattaattttttcgttctttaatttttaGGTTCTTGTTA
CCAATTCAATGGATTGGAATCGTCATTATCGCTGTCTTTAAAAGCACCGA
AAAGAATTGGTTACTTTGACGGTTTTAATTTAGTATTGGACTTTGGAAAA
GCCATGATAGCAAACCCTTCCTACTCTAATGCTGTTATTACCATGTTTGA
GAGTTTCGGGACACGTGATGATCACATACCTATTAATGGAGTTATCCAGC
TTTCCACTGGAacaaaactttttgcaaagatcACCGAAAAAGAGGTATTG
AATCTTAATTTGGGGCCTAAAACCCCCATTTGGTATTCTCCCCCACCTAC
TCTTTTTCCGGGGCTCCCCccattggaaaaaatatttttgagaccCAACA
TTTAATCATCTATTTGAAATGTTATATCTAACTTCTGCAATTTCTACCCC
CACTTCCCATAAAATATCCTGAGATCCCCCATTTGCATTAGTCCTCCCAT
CAAGGTGAAAATATCCACTTCCCCTCCACCAGGACAAAAGTTGATCCCCC
CATCTTTCTGGGCGAGGATCCCATGGGGTTCCACTTGAAGGAAATTAATT
TCTATATATTATTTATAAGCCTCAGCAGAATAGTAGAAAAACTGAATATT
TAATTATAGTCCGTCGGTTAtactcccagctggcacacaacgttgtttca
acgtttatttaacgttcacaacgtccatataacgttagatgaacgttgaa
acaacgttgtgtgccagctataCTGTGGACGCTTATGGTAGTGAATATTC
TGTTGCTCTGTTGCTAAAGATACAAAACAATTCGAAGCAAGGGTCCAACC
TAGTGATAAATTCTAAgccttttaaaaatataaatttcttccATTCTGTT
TAAATAGAGGGGTaaaaaaaaCACAGTGTTCTCCCTTagagcatggaggt
ataaagaaacaggagaagtatgctattgtaaccatgctcgccctacgatt
aaaaaaattacgaggtatgcatgctcataatctcatatatcgtgcatttt
taatgagctcttttgttgataggtgaaatcttattggctaacttaagtgt
tggaaataagatgagacgagattcattgtttctgacattggtgtaagaaa
atatttggactaaaaaagggcctgtaaactttgcaatccttcatcaaatg
acaagatttttcgatcaacattttcttcaaggtgaaccatattgcttaat
actttcctccaaaattctccagcaactttttgtctacaaatttggtctga
aattgtgtgtgcttataaagaactttttattttctggctggagaaaatat
cttttcaaaacaaaatttaatggatgccaaaattgaacgcaaacttattt
cgtggagctaaattttattttattctcgtatattagaaggctagaaatct
tcgatgctgatagtaagaatgttcagaacagacttgagttctactaaaaa
gtcgtatttcgtcgggcgagcctagaatttcttttgatttattacataaa
agaaatcaaaagacttcaacgaccaattaccgacaaattcatctcctgtc
tttctttatacctctatgcttAGAGTTTTGTTTGGAAGCTTTGACTACTA
TCCATGAATTATGCAGTTTGTCAGATTTCTGTGAAAATAACCATTTGAAA
TTACTAGACATAATTTAAAAGTATCTAAAAAATATGATTCTACATACAGA
CAAAGCTTATTTTGGTCTCTAACAGTGGATCTTAATTATGCAATTCTgtc
taaatagaccttttcataaattatgtcacgaacatcacttgcctcgtttt
gaaattattgccatggtgattaactcccagcgtaTTTTATTACaattact
ttctattcataaaaaagatcatttaatgtctcaagggatatgatcaccat
ggaaattatCTGGatacgaggtaagtgatgttcgtgacgtaatttatgaa
aatgtctaaATTTTCTGGTGATTAATTAAATAGCACaccgctatgcaaac
gtcatgattattacttttaacatttgaccgaaattcaatcctacaatcct
tttcatcttgatttgtaatgcgtgcaagttattacttttgtattgtcaat
aagtgtaattgacttgcaaaagcaattaatgcaaaggatgatgggatCAA
AACTTGGACGAACAGTAATTTCGATGTTCTTTACTCTTTCAGAATAAAAT
GTTACCGAGTCCCTATAATACCCATTGTGGTaaaactacacttttttttt
ataagaaccagtaa Coding sequence (CDS) from alignment at sc0000080_pilon:242630..248193+ >XLOC_037846 ID=XLOC_037846|Name=XLOC_037846|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000080_pilon:242630..248193+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGACAGAAGCGGATATAAGCATCCATCATAAACCATTAAAAACACA
TAAAGAATTAGTGGAAGAATTTTACTCTGGCATAACTCTTCATGGATTTC
GATTTCTCTTTGAAGATGAAGACAGAAGCGGATATAAGCATCCATCATAA
ACCATTAAAAACACATAAAGAATTAGTGGAAGAATTTTACTCTGGCATAA
CTCTTCATGGATTTCGATTTCTCTTTGAAGGCAATAAGGAGAAGGACCAC
AACAGCAGCAACACAGCCCGTTTCATTCAGGATTTGATTCAAAAAGGGAT
TGATACGAAAACAAAGTTTATCAACTCTTACAATCTTCCgtttgaagaaa
ttttccaaTCAGACGTGTTGGAACATTTAGAACCAGCAGGAAGCTGTGAC
TTTTATGATCAAAAATGTAACAGCTCTTGGTTCACAGCTCGTTACATTCA
AGGAgGCAATAAGGAGAAGGACCACAACAGCAGCAACACAGCCCGTTTCA
TTCAGGATTTGATTCAAAAAGGGATTGATACGAAAACAAAGTTTATCAAC
TCTTACAATCTTCCgtttgaagaaattttccaaTCAGACGTGTTGGAACA
TTTAGAACCAGCAGGAAGCTGTGACTTTTATGATCAAAAATGTAACAGCT
CTTGGTTCACAGCTCGTTACATTCAAGGAgGTTCTTGTTACCAATTCAAT
GGATTGGAATCGTCATTATCGCTGTCTTTAAAAGCACCGAAAAGAATTGG
TTACTTTGACGGTTTTAATTTAGTATTGGACTTTGGAAAAGCCATGATAG
CAAACCCTTCCTACTCTAATGCTGTTATTACCATGTTTGAGAGTTTCGGG
ACACGTGATGATCACATACCTATTAATGGAGTTATCCAGCTTTCCACTGG
AacaaaactttttgcaaagatcACCGAAAAAGAGGTTCTTGTTACCAATT
CAATGGATTGGAATCGTCATTATCGCTGTCTTTAAAAGCACCGAAAAGAA
TTGGTTACTTTGACGGTTTTAATTTAGTATTGGACTTTGGAAAAGCCATG
ATAGCAAACCCTTCCTACTCTAATGCTGTTATTACCATGTTTGAGAGTTT
CGGGACACGTGATGATCACATACCTATTAATGGAGTTATCCAGCTTTCCA
CTGGAacaaaactttttgcaaagatcACCGAAAAAGAGAATAAAATGTTA
CCGAGTCCCTATAATACCCATTGTGGTaaaactacactttttttttataa
gaaccagtaaAATAAAATGTTACCGAGTCCCTATAATACCCATTGTGGTa
aaactacactttttttttataagaaccagtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:242630..248193 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 595-666:5493 |
| Aaloc | 343-594:3293 |
| Aaloc | 118-339:385 |
| Aaloc | 1-114:1 |
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