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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:409045..413393- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037764 ID=XLOC_037764|Name=XLOC_037764|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4349bp|location=Sequence derived from alignment at sc0000081_pilon:409045..413393- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTTGACTGATAC
TGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGGGCAAAAGAT
TGACTTCAGGAAATATTTTGTTATCTTTACAAGAAATTGGAAGTCCAAGT
ATTTGCGTAACGAATTGTTTGGTAAGTATCCTTTCTTAGTTTTCTTAGAG
TTCAGTTAGCAACACTTTCAGACCTTTTAGATTTAATAGCCCCAGACAAC
TTTTTTAAGGGTATAACACCTCCTTCTCACAGACCTACTGGGACCTCTTT
CAACTGGAAAGATAAGCGAAAACATCGTCCCCGGTGGAAAAGTATACTCC
AATTTTTGTCCCCACTGAAAATAACCAAAAAGACAATCCTCACTTCAAAA
TATTATGCTATTTTTCCTATCCTCACTGAATTTCCTGACTTGAAAACAAT
AGAATTTAAATCCCCAGCCATAAAATATATGGTATTCTCAATCTCCTTCG
AGTTTCAGTCCGTTATTTTTACCCCCACTGGCTGTGGCCGATCTTGTGAC
TATGAGCCCCTAAAAATATCTTTACGTTTACACTTTTAGGCTTTTGGCTC
AACTAAATGCAAGTCAGTAAATTACAACAAGGTAACCAAAGAATGCCAAT
TGATAGACGAAAATCAAAATTTATTTGATGAAGAAAAATTTGAAGAGAAT
GATGATTGGATATATTATGGAAACCGTGAAAGAACACGAAAGGTAATTTT
TAACAACATTTCTCGTAATGTTAGTGAGTTTACGTACTTGCACTTTTGAG
GACGGTGGAGTGACTGAAGCGATTTGGAATAATCAGCAGTTTTGACGCGA
AAAATCAAGGACAGTAAAAGTGCTGTTTTACCATCGTCCTCAGTTTGTCA
AAATCTAGTCCAGAGGGCGGGAACTTATTTATATGCGGTGGGCGTTTGCT
AGAATAGGAGCTGCGTAGGAGAACGAGAAAAAGTTGGTGAGAGGCTGCTT
TCAGCTCTTCCTACGCTTACCTAACTCCTACGCTCACCTTTCACGCGTGA
TACCGGAAGCCCGACTGGTGTGTCAGTCTGGATCTAGTCAAATTAGAGCC
TTACCGTCTCCGTCACAGAAAAACACAGAATACATGAACTCGCTGTTATT
TCAATGTTTATGGTTCCGTTATATATGGACGTTATTGTTTCTTTCCTCAC
ATAGATAATGTTATGTAAGCCCCAAATTTTACGCGTTTACGCTGATTGTT
CTTTGATTCACAAAAAGGAAAGAAAAATCTTTTCGGGAAATTTTCGTGGA
AATAATTGAGGAAAAATTGCTAAAATAAGAGATATTTGCACAAAGATTTA
TATGCCTTCATTAGTTCTATTTATACTGAGACGATTGAGACGAGCAATTT
AGAAAATGAGCATTATGGAGGAGTGTACTTTCCATTCATGTTTCAATAAA
TAGGATCTTCTCCACAGATCACATTTTACAAACTACTCGTCTCAGACGAT
TTTTCCGTCTCAGTATAAATGGAACTATTGAAACTATTTCGAATCTTACG
CATCCAGGCAATTAAAAAGTGGAGTTTCACGGATTAAAACTGTGGACTTC
TTTCAATTAGGAAGTGTTTTGAATTCTTTATTAGCTGCTGTCATCAAGGA
CAGAGACATCTAATGTTTTCTATATTTGACATTTTTCAGCCCGAATGCAA
AACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATGACATTTTGA
GTTGCAGGAAACGTAAGCTTTATGAATGGTTGAAACTGATGTCGAATATT
GATACATTAAAAAAATCATTAACATTTTTTTGAAAGCGAGTTTCCTTCTT
CGGCACGTTTTTTTATAACAACATCCAAAATTTTGAGGCCTGATTGAATA
AATCCCATCGGAGAGAAATGATAGTTGGCCTTTTAATTGCATCATCCAAG
TCGGTTTCATATGCATTAGTGCATAAACATAAAAAGTTTTCCGGCTAGAG
CAACCAATCTCCGAAAATTTTGCTGTAAAATTCTTGATACGGCCTTGAAA
AATTACTTAATCTAAACCTTCTAAAGTCTGTTCACGATAAGTGTGCACTC
TTTTTTCATTTACCTATAACTTTTGAAGGAATTCTTCAATCTTTATAAAT
TTGGTATCATTGGAAAGATATTAGTGAGTGAAACAATTTGGAATAAAAAA
ATCGATAAAAAAATTCTAAAAACGAAGATGAAAATGAAGAAGAAAAAAAT
TAAGATCTTGTAGAAAAGTGCTATAACTATCATTTTCACTGAAGTGAATC
CTTGATTATCGAACGTCATCACTGTGAAAAAAATTCTCAAAAATTCTCAT
TCAGTCAAAAGATATCAAACAAAGTTATAAGCTGATTGACGTCTAAAAGC
GCTGTTTTCTCCTGTTTTCTGCTGTTTTTTGGGGTCAATCACTTATAAAC
TTTGTATCATAACTTTATTTTGAATAAATATTTTAGTGAAATTTCTTCAC
AGTGATGACCTCCTAAGATCAAAGAATCTATCAAGTGAAAATGAAAGTTA
TAGCACTTCTCTACAAGATCTTCATTTTTTTCTTCTTCATTTTCATCTTC
GTTTTTAGAATTTTTTCAAAGACTTTTTTATTTCAAATTGTTCCACTCAC
AAATATCTTTCCAATGATACCAAATTTATAAAGATTTAAGAATTCCTTCA
AAAGTTATAGGTAAAAGAAAAAAGAGTGCACACTTATCGTGAACAGACTT
TAGATGCTGATTTTTTTTATAAAAGTACACATTCTTTTAGATAAGTTCAT
TTCTGTGTAAAATAATTGACTGAGTGCCAGGATTACACAAATGAAGCGAG
AGCTTGAAAGCTAGACGAGTCCTTTCACCCCAATGATAATCTTCTTCATT
TTTTCAGCTCAATCATGTCAAGACATAAAAGATTCCTGTCCCACGTGTGA
CACGGGAAACTATGTAATCAAAGAAAAAAGTGTTGTCTGCATTTTTAATG
GTAAGTAGAACACACGTTTTTTATAAGAACAAACTACATAAGAACAGAAG
GCTTCGATGGCCAACATCTTAAGAACAAGTTAAGAACATTTTAAGGCTTT
GCTGACTCTAAAACACCAATTTCATACGTAATTAAACTCCGGTTAAGGAG
TTTGTTAAAATCAGTGTTTTTCATTTGTAATTGTACGTAAATCCGATCAA
TCGCGATATTCGGGTTCGATTTCCCGATCTTTCCAGTTTTATTTCCCGAT
TTGGTTTGAGTTTGTGCTCGTACCTACTAGGATATACCCTTTCAAATTTT
ATGTTAGATATATTAAGAAAGGCTGACCACGATAAAGATGTTTGCATAAT
GGTTCGCTATTCAAAAATGACAACTACCGGAGTTTGCAGCCGTCATTACG
GCTGTTTTATTTATTTTCCTTAGTTTTATAATCGTTTTTCTCATTTTTCT
TAGACAACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATCA
TTAAAAACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAATT
TTATTGTGATATGGACCTAGAAGGTGGTAAGTAAATATAAAAAAAACTTC
GTTTACCCTGCGGGGTATTGCGGGCCGGGGTATTTGTGCAAAATAGGTAC
CGTATGATCTGTAAAGCTACTTTTTTACCCCTCAAATTCTGACAAAAAGT
CACTCCCAAATATCTAATAGCCCTCTAACAAGGACACCAAATAATTTGCA
CAAATTCCTATGTTTTCTTTTCAGGAAAACTATCGATAAGAACATTCAAC
ATTTTTAAAGCCTTCAGATGTTCTTAACTTAGGTTTCAAAATGCTCTTAA
ATTGTTCTTATTTTCACCATTTTCTGATTATTTTTGTGCTATTTCCTAAG
GAATTGGGTCCGTAAAGTCTTATAATGTCTTTATTTGTTCGTAATATTTT
GACCAGAGAAGGCTTACAAAACGTCTAAACCTTCTGAATGAACATTATAT
TCTAGGTGGCTGGCTATTGGTAGCAAATTTGACTATATCAGATGTTTCAG
AGGCTCCAAATTTACATTATGATTTGATCAAAAAAACACAATTGACGTCG
CTCCAAGAAGTACGAACGGGTGCTTACGCTCTTGCGTACGAGACGTTAAG
AAATTTACGTACCCAAAATGCTTTTAGTGAGATTCGCATTAAGTGTCGCA
AAGCCGTGTTTGGGAAACTAGTTCATGTGGTTCTAATGAATGTCGATCAG
TTTGTTGGCATTGTTTCTAAGAACCAAAAATTGGAAGGAACAGATTTCAG
ATTCCTTCCTGATGATGAGTTCAAATCATTTTACCCAGCTTACAATACA Coding sequence (CDS) from alignment at sc0000081_pilon:409045..413393- >XLOC_037764 ID=XLOC_037764|Name=XLOC_037764|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1914bp|location=Sequence derived from alignment at sc0000081_pilon:409045..413393- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCTACTGTGATTAAGTTGATATTGATTCTTTATTTGACTGATAC
TGGATTTGGACAATCAATCACATTAAATTTTGCATTACGGGGCAAAAGAT
TGACTTCAGGAAATATTTTGTTATCTTTACAAGAAATTGGAAGTCCAAGT
ATTTGCGTAACGAATTGTTTGATGAAAGCTACTGTGATTAAGTTGATATT
GATTCTTTATTTGACTGATACTGGATTTGGACAATCAATCACATTAAATT
TTGCATTACGGGGCAAAAGATTGACTTCAGGAAATATTTTGTTATCTTTA
CAAGAAATTGGAAGTCCAAGTATTTGCGTAACGAATTGTTTGGCTTTTGG
CTCAACTAAATGCAAGTCAGTAAATTACAACAAGGTAACCAAAGAATGCC
AATTGATAGACGAAAATCAAAATTTATTTGATGAAGAAAAATTTGAAGAG
AATGATGATTGGATATATTATGGAAACCGTGAAAGAACACGAAAGGCTTT
TGGCTCAACTAAATGCAAGTCAGTAAATTACAACAAGGTAACCAAAGAAT
GCCAATTGATAGACGAAAATCAAAATTTATTTGATGAAGAAAAATTTGAA
GAGAATGATGATTGGATATATTATGGAAACCGTGAAAGAACACGAAAGCC
CGAATGCAAAACAAAGGAAGCTGGCACCGATTGCTGCTTGCCGTCAAATG
ACATTTTGAGTTGCAGGAAACCCCGAATGCAAAACAAAGGAAGCTGGCAC
CGATTGCTGCTTGCCGTCAAATGACATTTTGAGTTGCAGGAAACCTCAAT
CATGTCAAGACATAAAAGATTCCTGTCCCACGTGTGACACGGGAAACTAT
GTAATCAAAGAAAAAAGTGTTGTCTGCATTTTTAATGCTCAATCATGTCA
AGACATAAAAGATTCCTGTCCCACGTGTGACACGGGAAACTATGTAATCA
AAGAAAAAAGTGTTGTCTGCATTTTTAATGACAACAACTATCCTACTTGT
AAAGTGCTCAAGCAGAGATACCCATCATTAAAAACCGGCTTCCACCGAGT
TGGTTATGGAGAAGACGTGGTTGAATTTTATTGTGATATGGACCTAGAAG
GTGACAACAACTATCCTACTTGTAAAGTGCTCAAGCAGAGATACCCATCA
TTAAAAACCGGCTTCCACCGAGTTGGTTATGGAGAAGACGTGGTTGAATT
TTATTGTGATATGGACCTAGAAGGTGGTGGCTGGCTATTGGTAGCAAATT
TGACTATATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGATC
AAAAAAACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGC
TCTTGCGTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTG
AGATTCGCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTG
GTTCTAATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAA
ATTGGAAGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCAT
TTTACCCAGCTTACAATACAGTGGCTGGCTATTGGTAGCAAATTTGACTA
TATCAGATGTTTCAGAGGCTCCAAATTTACATTATGATTTGATCAAAAAA
ACACAATTGACGTCGCTCCAAGAAGTACGAACGGGTGCTTACGCTCTTGC
GTACGAGACGTTAAGAAATTTACGTACCCAAAATGCTTTTAGTGAGATTC
GCATTAAGTGTCGCAAAGCCGTGTTTGGGAAACTAGTTCATGTGGTTCTA
ATGAATGTCGATCAGTTTGTTGGCATTGTTTCTAAGAACCAAAAATTGGA
AGGAACAGATTTCAGATTCCTTCCTGATGATGAGTTCAAATCATTTTACC
CAGCTTACAATACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:409045..413393 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 616-957:343 |
| Aaloc | 493-612:895 |
| Aaloc | 400-489:1441 |
| Aaloc | 325-396:2661 |
| Aaloc | 172-324:3761 |
| Aaloc | 1-171:4350 |
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