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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000025_pilon:1417089..1420103- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037674 ID=XLOC_037674|Name=XLOC_037674|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3015bp|location=Sequence derived from alignment at sc0000025_pilon:1417089..1420103- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGGAGTTGTATTTGAAGATATTTTTGATGTGAAAGACATTGATCC
AGGAGGCAAGAAATTTGATAGAGGTATTATTCACACTGCTTTCAGGCCAT
TCTTCATGCCCTTTAAGCGTTCGGTTATCGGACGCTGCCCCTCCTGAAAT
TACTAAAATATTGGTAAAAACTGCCTTTTTAATGGAACGATACCTTTGGC
CACCAACGGGCGCTGCCGTGCCTTTCTAAAATATGGCCTGGCTTTTTGGA
AATCAATCAGTTTGGGGTCTTTCTCTTCTTTCTTTCTTGAAAAAGAGATA
CCATTGAGGAAAAAATTTGGTTGGAATTTGATCTGCTGGAAGGTCCAGAA
GGTTTTTGTAGAAGGAATTTTATTACACAAATAGCCTGAAAGAAATAATT
TGGTAAGGGATCTGCGAGAATTTGATTTGTTGATTACAAGAAATCTACCG
AGTGCACCAAAATAAAGTATACAGGTTTGTCAAGATATTGTGAGCTTCAG
GATTTCAATTTTTTGTTCATTCTTTTTTCATCGTATAGAGGATGCTCTAA
CTTGAATTTCGAGCTATCATACTTTAGAATTGAAAAAGTAGTTCGAAAGT
TTGTTTTTTTTATTAACTGACTTTTTTTTCCATGTCGAAATTTCAAAAAA
TCATTACAGCAATCACGCTATAATTATAAATAAGACAAAATGACAAAAAC
ACAATTTCATTGTTTTTTTGATTCTTTTTTTTCTTATTTATATTTTGCCA
ACAGTTTCTCCATCTTATTTGCACATCATGAACATTTCCAACACGAGCAA
ACTCAATGCAGACCCAAGTTCTTTGAGTCACTAGTCGAGGAATGGTGATC
TATTTTTTCCAACGTTTTTATCATATAGCACACACATAACATCAAAACCT
CTCTTGGAGATTTATAAAACTTTTTCTCAGCTTTTTCAAAAATATTATCC
CACATGGGAATAGCTTGCTTTACCATATCTTTCAAATTTCGTAATGAGTT
TTGATGAACACAGTTGCATTTTTGGTATTTTTACGTGTACAAAGAAGGTA
AGTGTCAAGAGAAAAGTATGGTCGCTGTTTTTTATGATTATCTGAAAATT
CAACATTAAAAAGTCTTTTTTTTAAATGATTTTCGAACTACTTTTTCAAA
TTCAATGTATGATAGATAGCTCAAAATTCAAGTTAGAGCATCCTCTATAC
GATGAAAATAGAATGAACAAAAAATTGAAATCCTGAAGCTCGCAATATCT
CGACAAACATGTATACTTTTTTGTGGTGCACCCGATATATTAGGTTAAAT
TCATTAAAATTTCTTCCTCACCATTAAATTTTTAAAACATGCAAAAACAC
TGTAGGCTTCAATTATTGATAATTATTACTTGTCCTCTAGAAGAACCTAT
ATCTTTTCTATCGTTATCAGTGTCAAGACTTCATTGTGAAAGTGAAAGTT
TCAAAATGGATTTGATTTTGGATGTCAACACACAGATCTACCCAGTTGAC
CTTGGTGAAAAATTCCGTCTTGTTTTGGCCACAACATTACGTGAGGATGG
AACTCCAGATGATGGTGAATATAATTCAGCAGATAATGCCCCATCAAGAG
CTGACCAGTTTGAATATGTCATGCATGGAAAAGTGTACAGGATAGACGCT
GAAAATTCTGGTGGTGGTGATCATTTTGGAAATAGATTGTAAGTTTTATT
TTTTGTCCCCTTGTGATTAATTTCGGGTAGGTCAAAATTTTCGATTTTTC
AACATAACTTTTAGTTTTATATATACCAAAATTTAAGTTAAGCTTTCCTC
TATCGAGATATTGAGCTTCAAAAAGCGCAAAAACTGGACAAAACAGCTGT
TTCTGGCTGAAAAACACGATTTTCAAGGGTTAATATCTCGAGTTAGGTAC
AGAAATCACCTATACTTGCAATATATCTCTAATCTTAATTTTTTAAGAGC
TTTCCAAAAATATACAACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCAT
TAATTTTTGACCCTATGATTTTTGCCTGAGACCGTCATATTTGTCCGAAA
ATCACACCAAAGTGTCCGAAAAAAAATTGGAAACATCGTAATTTCGATTC
CCCTACCCCTTAGCTTTCCAAAAATGTATAACAAGTGCTTCTAACAAAAC
AATCGGGCGATTTAAAAAAATCGAACAAAATCCCCCCTACTAATAGAACA
ACCAAAGAATCTACAAAAAAATCTTTAACTGTAAGCTCACAATATCCTGA
CAAACCTGGTGGATACTTTTTTGGTGCATCCGGTATATTTTCTTATTTTC
GAGGGAAATGAATCATTTTTTGTATTATTTTTGGAAGAATTATTTTGTTG
TATTCTTGAAGGAAAATTAGAAATGCCTTCTTTGTATTTTAGAAAGAAAA
CGATAAATCCTTTTTATGTATTCTTGAAGGAAAATGAGAATTATTTCGTT
GTATTTTTGAAGCAAATTATAAAATATCGATGTATTTTTGAAGGAAAAAT
TATTTCGTTATATTCTTGATGGGAAATTAAAAAATATTCCTTTGTATTTT
TGAAGGAAAATCAAGTAAATATTCCGTTGTATTTTTGAAGAAAAATGAAG
TATCATTGCATTGTTTGTTGAGAATCTTGGACGAACAAACTCAACACTTG
GCCACATTTAATTTCATTATTATTAAATATACTCTTTTCAGATCAGCCTA
CGTTTCTTACGGTGGACTGTTGATGAGGCTACAAGGTGACGCGAATAATC
TACACGGTATGGAAGTTGATCAGCTAATGTATTTGTTGATGAAAAAAATC
GCCTTTTAAGGGATACAAATGGGATACTTTTGGTGTAAAAAGAACATTGC
TTTTAACGAGGAGAGGTCGAAGAAAGATCATTTTTTTGAATCGCAGAGAA
CGATTTCGATGTTAGGCTTTTTGAAGCTATTGAAAAAGTGTTCATTTTAG
ATCTACTCAGAAAGACAAACGGATTTCGAAATGGGAGAAATGAAACATGG
AATTTTCAAATATTA Coding sequence (CDS) from alignment at sc0000025_pilon:1417089..1420103- >XLOC_037674 ID=XLOC_037674|Name=XLOC_037674|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=942bp|location=Sequence derived from alignment at sc0000025_pilon:1417089..1420103- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGGAGTTGTATTTGAAGATATTTTTGATGTGAAAGACATTGATCC
AGGAGGCAAGAAATTTGATAGAGATGGCAGGAGTTGTATTTGAAGATATT
TTTGATGTGAAAGACATTGATCCAGGAGGCAAGAAATTTGATAGAGTGTC
AAGACTTCATTGTGAAAGTGAAAGTTTCAAAATGGATTTGATTTTGGATG
TCAACACACAGATCTACCCAGTTGACCTTGGTGAAAAATTCCGTCTTGTT
TTGGCCACAACATTACGTGAGGATGGAACTCCAGATGATGGTGAATATAA
TTCAGCAGATAATGCCCCATCAAGAGCTGACCAGTTTGAATATGTCATGC
ATGGAAAAGTGTACAGGATAGACGCTGAAAATTCTGGTGGTGGTGATCAT
TTTGGAAATAGATTTGTCAAGACTTCATTGTGAAAGTGAAAGTTTCAAAA
TGGATTTGATTTTGGATGTCAACACACAGATCTACCCAGTTGACCTTGGT
GAAAAATTCCGTCTTGTTTTGGCCACAACATTACGTGAGGATGGAACTCC
AGATGATGGTGAATATAATTCAGCAGATAATGCCCCATCAAGAGCTGACC
AGTTTGAATATGTCATGCATGGAAAAGTGTACAGGATAGACGCTGAAAAT
TCTGGTGGTGGTGATCATTTTGGAAATAGATTATCAGCCTACGTTTCTTA
CGGTGGACTGTTGATGAGGCTACAAGGTGACGCGAATAATCTACACGATC
AGCCTACGTTTCTTACGGTGGACTGTTGATGAGGCTACAAGGTGACGCGA
ATAATCTACACGATCTACTCAGAAAGACAAACGGATTTCGAAATGGGAGA
AATGAAACATGGAATTTTCAAATATTAATCTACTCAGAAAGACAAACGGA
TTTCGAAATGGGAGAAATGAAACATGGAATTTTCAAATATTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025_pilon | genome | sc0000025_pilon:1417089..1420103 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 409-471:64 |
| Aaloc | 343-405:324 |
| Aaloc | 76-339:1594 |
| Aaloc | 1-72:3016 |
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