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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000025_pilon:1179251..1184564- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037665 ID=XLOC_037665|Name=XLOC_037665|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5314bp|location=Sequence derived from alignment at sc0000025_pilon:1179251..1184564- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAAGGCTCGCTAATCTGTTTAAATGTAAGTGTAATCATAAATCAAT
AAGATTATATCGGCGAACTGTGTTCTTTGGCGTTAAAGACGATAAACTTG
TCATGGCTTCATCATCCAAAAAAGATTCTGCTGAAGATGCTGCTGCCAGA
AAAAGAAATGCTGGAATTATAATCATTGGAGATGAGATACTGAAAGGACA
TACCAAAGACTTAAATGCATCCTTTCTTTTGTCAAAATTATGGACAAATG
GGGTCAATGTCAAGAAAGTCTCCTTTGTTGCTGATGATGTTCAAGAGATC
GCCAGTGAAGTGAAAATATTTTCAGACAATTATTCCTTTGTAATAACATG
TGGCGGGATAGGACCCACACATGATGATACAACATTTGAGGCAGTCTCAA
AAGCTTTCAATGAGCCACTTGTTGTAAATAATGATCTTGTTACAAAAATT
AAGCTTCTGACATCGAAGGAAGATCTTTCCCCTGGGCTTTTGAAAATGGC
AACACTTCCTGAATCTACCAAACTTATAACAGGACAAGATCCAATAACTG
GGACATCAGTAAAATATCCTTTGATGAATGTACATAATGTATTCATTTTT
CCTGGAGTTCCTGAATTCATGCAAAAATCTTTTACAGTGAACCAGTATCT
ATTTTCGGCAGAAAACAAATTCTATCTAATGAAAATCTACATCTCTGTAA
ATGAAGACGAAATATCAGCTAAAATAAAAAAGGTTGATGATGCATTCCCT
GATGTTAGTATTGGGTCTTATCCGATGTTGAATGATATTTACAAAGTAAA
GCTGACATTAGAATCTGAAAATCAAGAAAGTTTGAACAGTGCATTTGATT
TGCTCATGAAAGAACTACCCTCTCAAATCATTGTGTCAGTCAAGAAGTGT
GAACCAAATTCACGAGAAGACCACCATGAATTGATCAATACAAGCAAAGA
ATGTCAACAAAGATCAAGACTGTATTCATCAACACAGTGTAAGTGTTTAT
TTTATAAATCAGAAATTGCACCATCTTTGATCTTGGTTCTTTGACCACAG
TTGAGACAAAAATTATTTGGACAAAGATCCTTACAAGACTTTACTTGAAA
GTGAGTAACTCACTTTTGATTCCTTTTGATTCAAGACCTATAGTCCATAG
ACTCCTTTTGGGTAGGTATGACTAATTCAAAAATTTCATTTTTCATCCGT
TAGGGTAAATTTTGTCCTACTGTAAGTATTTTTCCTCAAGTAGAAAATAA
TGGTTCTCTTTTTGGTGACTTTCCTAAATCAATCAAACTTTTAATAAACA
TCTGGTACATAATGGATGTACAGTTATGGGAAAGTGTTAAAAGTTTAGTC
TCCGCTACCAAGGTTTCAAAAGATGACTTAGGAATCCTGCAATATTCTTA
ATTATTCTTCTAATCCTTAAATTCTAGGTTGATTTGATTAGCTAATTTCG
ATTCGGAGAAAACTCTTGGTTCTAGAATGAAAGTAAAATGAGAAATTACA
GTAGTCCACTTTTAAAAACAATGTAACATTCTGAATAATAGTTTCTTTAC
AGGTATATAATGTTTGCATAATGATATTATTTCAAAAAATATTTTCCAGA
TGCTTGCATCCCCTTTTTAATGTTGTTCAAGGAAGTTTAGATTTTTTGTA
TTGGAATGTCTTATCCGATTGTTTCGCTTTTATAATTCATCTTTGGAAGT
TCAAAGTACATATATTATTTCAATAGTATGCAGTATTGTATTAGAACTTA
TTACTACTAGTTATTGGCTTGTCAGAAAATGCCCACTAGTCTTTTATTGT
GACTTTTGACAGCGTCAAAAACTAATTCAATTAGTACAACACAAAGAATG
TATATATATAACTTATGAAACCTAAGCAAGCAAATCTCCTTTTGATAAAA
AGTCCAAAGTTTGAATTTTCTCTCATAAAGCAATTCTCACACTGTTCCAC
ATCAGAAGCCTCTCGTGTTTTAGTATAATTTGCAAAATCTAAACATGAAA
GAAAAACTTTGGAATCATTATAAAGGTATGACTTTTGTTTATATTTAATA
CTTTTGGATGCATTACATGTTTATGTTTTGTTTGTGCATGAGTTATAATG
ATCTTGAGAGATCCCCTTTATTTCTCAATGTTCCCTTCTCTACGACGATT
GCTTAAATGGTTGTAGGAGAACTTGAGATCATATCATGACATTCTTAAAG
AATACAGGGCTTTATGGATCATATAATAATAACAATGCTCTATGAGTAAA
CACGGCAAGATAGAAACAGAGAATGCAATGTGATCACTTTGTGATTTTTG
ATAATCGATAGGTAAAGGTAATTAGTAAGACAGTACACCCCTGTCTCACA
GACCCACTGGTAGTAAAATTTTACTGGAACTTTTTTCCTCAGTGGGGATA
AACATTCCTATTGAATTCCCAATGGGGATAAAAATTCTATTGTTCCAAGG
TAAAAAGATCCAGTGGGGATGGTTTTGGAGTACAATTTTTAAGCATAGAA
TTTCGAGTGGGGATGAAATCAAAGTCATTTTCCCAGTGGGGCTGAAATTC
CCACCGGGGAAATTTTCCAGTGGGACTGGGGTCCCAGTGGGTCTGTGATA
CAGGGGTGTATTAAGTTAGTAAGACTAGTCAAAAGCTAAGAGATTTCTAG
TTTTCTAGCCGAAACCTAAGACTATATTATTGGGCATTTCAGTAGACAGA
AATTTTTCAGTCAGGTATTTATACTCGAGTAATACAAACTTAAGAAAAGT
CGTTGAGTATATAATATATATTGGAGGTTTCAATTTTGTGTCGTATAAGC
ATAAAATTGCGTTGATTTTTAACATTAATGCTCCAAAACGATTAAGGTAT
CATTAAAGATTGCAACAATTATGCTATTTAAGTCTGCTATTTATCTTTTT
TTCGATTGATAATTAAATGGTCGACTCATTAGACTTCCTCTTACATAATT
AGTGAAGCTGACTTTTTGTTCCTTTTGGATTTAGAGCCCTATACATTTTA
CCATAAGAAGCCATCTTGCCTCAAGGCAATTTTTGCTTTGTTTGGATGAT
TTTTTATTTGGAAAATGGTATTTGAAACTGTATTTTTGAAGTCTATTTGA
AAATTCCAGCTTAACTATGTACTCTCGGGTACCTTATAGCTGTTCCCCCC
TGCTAATTAGTTTTTGGGAAAATGCTTTTGAAAGTTCCCCTCTTTTGTCC
TAATTCTGCTGTATTAGCCTCCTTTTCAAAAATTTTCCACCCAGGTAATT
TTTATTCCAATCCCCCCTTATTAAGTTTTGAGATTTTTTCCAATCCCTTG
CGTTTACTGAACTGTTCGATAATACTACAACGACTTCTTCTAATAGAGGT
TTAATGAGGTCTTTCAATTCAAGTTAATTATATCTCGACTTCTTTTCTGT
CCGTTTGTTTATCACCGTTGTTTGGCTTATTATAATGTTTACTATACATC
TGAATACATATGTTGGTGTTTTTTTAGAACGTACTAAATTGTGTTTTGGG
TATCTCCTGTTTAAGACAACTTTTTCTTAATGAAAACCTTTACATGAGTA
TTTCAATTTATTTTGAGAAAAAGAGATAGGATGAAATATTCCGATTTTTT
TGGTCCGGCTTTAATTGGATAAGTTAAACAGCTACAATTTAAGGACAAAA
TTAGGAGTAATCTAGGATGAGAGCTTTCTTCTGTGCGAATGGATGAAAAA
TTTCCCCAGTTAATTACTCCATATATAAAAGATTTTGTCTTGAAATTATA
CTCTTAAATGTAAATTATTAGAAAACGTAAGCTAAATGATGAAAGGGGTA
GAAAAGGATAAAAAAATATTGATAAAAAACGCGCTGTCCAAAAGAATGTT
TTAAAAACTGATGGATATTATTTTGAGGATGAAAATTATATAGCCTATAG
TCCTATATAAGTGTAATAGTAAAGAATGTATCTTTCAGAAAATAGCAATA
TAAAACAAGGTAAATCCTTTTGTGAGTAATTTTGTCTATTTACTTGAGAA
ATGGTTTTTTAGACTCAGCAAGCCTTAAGATGTTTTTAAGTTGTTCTTTA
TATTTTGGCCATCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAA
GAACGTCTACCTTAAGGGAAGAAATTTTTCCGCGAAATGAATAAAAACCA
CCTTGGACGATATTCACTTAAATTTTTATCCCTAAAAAATTCAAGAAAAT
CCTTCATTCGCGAATTTTTTCCGCGAAATACGCAATTTTCGCAACCTTAA
TTCGCGAAAATATCTTCCGCGAAAATTTCTTCCCTTAAGGTATCATTGTT
AAGGCTTTGGATGAACTTTGAAACTATGCGTTTGCTGGGTAAGAACACTT
CACATATTAGCACATGCATAATTAAAGGTTTATTTTTACATAAGTGATTC
CGTTTCATATTAGACACGTGATTCATATCAGTGTATGTCTATTGTTATTA
TGCTGATATAAGCAAAATGTCTTTCTTTTCCTCTTTCTGACCAATCTTCC
TCCACATCCTTATTAATCCAATGTGAAAAGCTTGTAATCCTTAAAATTGA
TGAGTAAGCAAACAATTCGCTCTCATGTAAAAACAAAACCTTTAATCTAC
TCCATTCTTTCTCTTTTCTTTACAGTAAACTCCCTATCAGTGGTCGATAT
GGAGCATTATCTCGATACAAGCAATACAACATCTCTTGCATCTGCTTTGA
AGTCTGCATATGCTGTATTCAATCAAACCATTCAAATGTACTCCTTAGAT
GAAATATGTATTGGATTCAATGGTGGTAAGGACTGCACTGCCGTTCTGCA
TTTATACGTTGCATTTATCAAGAAATTCTACCCAGATAATACTAAAAGGA
TTACTGGGCTTTATTTAAAGAATGCTAACCCGTTTAAAGAAGCTCAAGAT
TTTATTAAAAACTGTGAAGCGAATTATAATATTGATATGATTGTTATTCC
GGCTAGTATTAAAGAAGGCTTGGAAAATTTGAAAGAATCGCACCCGAAGA
TTAAAGCTGTGATCATGGGGACACGTCGCCACGATCCTTACTCATCGCAA
CTGAAATCGTTTACAATGACCGATGTTAGCTGGCCTAGTTACATGCGAGT
ATTCCCGATCCTAGATTGGTCGTATGCCGAAGTATGGGATTTTTTGAGAA
CTTTTGATTTACCTTACTGTCGTTTGTATGATGAAGGATATACTTCTTTG
GGTGACCCTAACAATACACTTAAGAACCAAAGTTTATTATTGAAAGATGG
TAGATACTCACCTGCGTACATGTTGCAAGAAGAAAGCTTGGAACGCGAAG
GACGAAATAAATGA Coding sequence (CDS) from alignment at sc0000025_pilon:1179251..1184564- >XLOC_037665 ID=XLOC_037665|Name=XLOC_037665|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3354bp|location=Sequence derived from alignment at sc0000025_pilon:1179251..1184564- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAAGGCTCGCTAATCTGTTTAAATGTAAGTGTAATCATAAATCAAT
AAGATTATATCGGCGAACTGTGTTCTTTGGCGTTAAAGACGATAAACTTG
TCATGGCTTCATCATCCAAAAAAGATTCTGCTGAAGATGCTGCTGCCAGA
AAAAGAAATGCTGGAATTATAATCATTGGAGATGAGATACTGAAAGGACA
TACCAAAGACTTAAATGCATCCTTTCTTTTGTCAAAATTATGGACAAATG
GGGTCAATGTCAAGAAAGTCTCCTTTGTTGCTGATGATGTTCAAGAGATC
GCCAGTGAAGTGAAAATATTTTCAGACAATTATTCCTTTGTAATAACATG
TGGCGGGATAGGACCCACACATGATGATACAACATTTGAGGCAGTCTCAA
AAGCTTTCAATGAGCCACTTGTTGTAAATAATGATCTTGTTACAAAAATT
AAGCTTCTGACATCGAAGGAAGATCTTTCCCCTGGGCTTTTGAAAATGGC
AACACTTCCTGAATCTACCAAACTTATAACAGGACAAGATCCAATAACTG
GGACATCAGTAAAATATCCTTTGATGAATGTACATAATGTATTCATTTTT
CCTGGAGTTCCTGAATTCATGCAAAAATCTTTTACAGTGAACCAGTATCT
ATTTTCGGCAGAAAACAAATTCTATCTAATGAAAATCTACATCTCTGTAA
ATGAAGACGAAATATCAGCTAAAATAAAAAAGGTTGATGATGCATTCCCT
GATGTTAGTATTGGGTCTTATCCGATGTTGAATGATATTTACAAAGTAAA
GCTGACATTAGAATCTGAAAATCAAGAAAGTTTGAACAGTGCATTTGATT
TGCTCATGAAAGAACTACCCTCTCAAATCATTGTGTCAGTCAAGAAGTGT
GAACCAAATTCACGAGAAGACCACCATGAATTGATCAATACAAGCAAAGA
ATGTCAACAAAGATCAAGACTGTATTCATCAACACAGTATGTTAAGGCTC
GCTAATCTGTTTAAATGTAAGTGTAATCATAAATCAATAAGATTATATCG
GCGAACTGTGTTCTTTGGCGTTAAAGACGATAAACTTGTCATGGCTTCAT
CATCCAAAAAAGATTCTGCTGAAGATGCTGCTGCCAGAAAAAGAAATGCT
GGAATTATAATCATTGGAGATGAGATACTGAAAGGACATACCAAAGACTT
AAATGCATCCTTTCTTTTGTCAAAATTATGGACAAATGGGGTCAATGTCA
AGAAAGTCTCCTTTGTTGCTGATGATGTTCAAGAGATCGCCAGTGAAGTG
AAAATATTTTCAGACAATTATTCCTTTGTAATAACATGTGGCGGGATAGG
ACCCACACATGATGATACAACATTTGAGGCAGTCTCAAAAGCTTTCAATG
AGCCACTTGTTGTAAATAATGATCTTGTTACAAAAATTAAGCTTCTGACA
TCGAAGGAAGATCTTTCCCCTGGGCTTTTGAAAATGGCAACACTTCCTGA
ATCTACCAAACTTATAACAGGACAAGATCCAATAACTGGGACATCAGTAA
AATATCCTTTGATGAATGTACATAATGTATTCATTTTTCCTGGAGTTCCT
GAATTCATGCAAAAATCTTTTACAGTGAACCAGTATCTATTTTCGGCAGA
AAACAAATTCTATCTAATGAAAATCTACATCTCTGTAAATGAAGACGAAA
TATCAGCTAAAATAAAAAAGGTTGATGATGCATTCCCTGATGTTAGTATT
GGGTCTTATCCGATGTTGAATGATATTTACAAAGTAAAGCTGACATTAGA
ATCTGAAAATCAAGAAAGTTTGAACAGTGCATTTGATTTGCTCATGAAAG
AACTACCCTCTCAAATCATTGTGTCAGTCAAGAAGTGTGAACCAAATTCA
CGAGAAGACCACCATGAATTGATCAATACAAGCAAAGAATGTCAACAAAG
ATCAAGACTGTATTCATCAACACAGTTAAACTCCCTATCAGTGGTCGATA
TGGAGCATTATCTCGATACAAGCAATACAACATCTCTTGCATCTGCTTTG
AAGTCTGCATATGCTGTATTCAATCAAACCATTCAAATGTACTCCTTAGA
TGAAATATGTATTGGATTCAATGGTGGTAAGGACTGCACTGCCGTTCTGC
ATTTATACGTTGCATTTATCAAGAAATTCTACCCAGATAATACTAAAAGG
ATTACTGGGCTTTATTTAAAGAATGCTAACCCGTTTAAAGAAGCTCAAGA
TTTTATTAAAAACTGTGAAGCGAATTATAATATTGATATGATTGTTATTC
CGGCTAGTATTAAAGAAGGCTTGGAAAATTTGAAAGAATCGCACCCGAAG
ATTAAAGCTGTGATCATGGGGACACGTCGCCACGATCCTTACTCATCGCA
ACTGAAATCGTTTACAATGACCGATGTTAGCTGGCCTAGTTACATGCGAG
TATTCCCGATCCTAGATTGGTCGTATGCCGAAGTATGGGATTTTTTGAGA
ACTTTTGATTTACCTTACTGTCGTTTGTATGATGAAGGATATACTTCTTT
GGGTGACCCTAACAATACACTTAAGAACCAAAGTTTATTATTGAAAGATG
GTAGATACTCACCTGCGTACATGTTGCAAGAAGAAAGCTTGGAACGCGAA
GGACGAAATAAATGATAAACTCCCTATCAGTGGTCGATATGGAGCATTAT
CTCGATACAAGCAATACAACATCTCTTGCATCTGCTTTGAAGTCTGCATA
TGCTGTATTCAATCAAACCATTCAAATGTACTCCTTAGATGAAATATGTA
TTGGATTCAATGGTGGTAAGGACTGCACTGCCGTTCTGCATTTATACGTT
GCATTTATCAAGAAATTCTACCCAGATAATACTAAAAGGATTACTGGGCT
TTATTTAAAGAATGCTAACCCGTTTAAAGAAGCTCAAGATTTTATTAAAA
ACTGTGAAGCGAATTATAATATTGATATGATTGTTATTCCGGCTAGTATT
AAAGAAGGCTTGGAAAATTTGAAAGAATCGCACCCGAAGATTAAAGCTGT
GATCATGGGGACACGTCGCCACGATCCTTACTCATCGCAACTGAAATCGT
TTACAATGACCGATGTTAGCTGGCCTAGTTACATGCGAGTATTCCCGATC
CTAGATTGGTCGTATGCCGAAGTATGGGATTTTTTGAGAACTTTTGATTT
ACCTTACTGTCGTTTGTATGATGAAGGATATACTTCTTTGGGTGACCCTA
ACAATACACTTAAGAACCAAAGTTTATTATTGAAAGATGGTAGATACTCA
CCTGCGTACATGTTGCAAGAAGAAAGCTTGGAACGCGAAGGACGAAATAA
ATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025_pilon | genome | sc0000025_pilon:1179251..1184564 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 991-1677:688 |
| Aaloc | 1-987:5315 |
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