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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:1333949..1338224+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037568 ID=XLOC_037568|Name=XLOC_037568|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4276bp|location=Sequence derived from alignment at sc0000042_pilon:1333949..1338224+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaaagtttgaaaaaccaCAAACGTTCGAATTACGGAAGGATGAACGA
CAGCAGGTAGGTTATCTCTAATACTCCTTATCCTTGAAATATTTAAGACT
TTAATGTAGGATTTTTCAATCAACACCCCTGTACAAGTCGAAAGCGGTCT
GGTGTATGAATAAACATCTAATCAGTGAAAATCTGGGTGATTAAAGATTT
CATCCTGGGAGGATGAGACAGATTTTGGAAACTGTATGTGAGCTAAAATG
GTGGAGTCTGAATAATATCTATTAATTACAGCAATTCCTTGCTATCGATG
GAAATGTCTGATACAGCTTCATTGAACCCGATCGAATCTACAAATCCTCC
ACAAGACGATGATGTCATAATTCAACAGCCACAGTAAGTGGACCTTCCCT
ATATCTTTTTCTGCGAGAGTTAATTGATTATAGGTggcattttgttttca
aaaataaactaCATCTGTCCGTCTCTGCAGGTATGTGAATTTCTCTCAAA
GACTATCGATCATCAAATCATCTCTTCATTTGCGTATGTTGCTACATGCA
TAAAGAGCAATATTTTACATGAATAGCTCAGTAATATAGGACTTTTAGTA
GAAcgtttgatttgattggtccaCAGAATTTAAGAAGTGAATGGAGCATT
CGACGGAGTGGGAACCCCAGTTTATGGTACTGAAgtttgtctcaatataa
tttgcagcggggacaaaaaagttctaagattgaaaagtttctgatataaa
aatgaagatcatagcattattctacaagaagttgagtttctacttcttca
tctctcatcttcatttttccatttttttgaattttttatttttaataatt
ttttaataatattccattccggatcaaatttttaacgagcacaaaactgt
tatctaattcgaattctaccaaaattctatcaaaccttttttgtctccgc
tgcaaattatattgagacaaacTTCAAAGTCTAGCACAAATCGATCATTG
CTCCTCATTCCCctcttgacccccccccctcatacTAAAAGGTCTGAATC
ATTTCACTTTCATCATACAGGGCTTCGAGCAACTTAGAAGTTGTCCATGT
CGCACCTTTGCCAGTACAACCCTATCATATAGCTCTACCTCCAGAAATTG
CTCTGCATAGTCAAGCGAACAACTGTACATGTTTTGGATGCTTTTCTTGC
TGTTTTAATATGTGTATTCGATGGGATTGTATCTCAGAAATGACGTTATT
TCAAGCCATTCATAGATACGAAGAAGAATTCTTGCTGCCTGTACAGGTGA
ATTTTATAATTGCAAAGGATTCGTTTTTATTGGGAGGGAGAAGTTATTAT
TTTAGGGAAAGTCTGGAAAGAGACATTCGGAAAGGGTCAGGGTAGGGGCA
GTTGTTTGAAAGTGTGGTATTCTAAATAGTAATTAATAGGTTTTGAGAAA
GTATAGTTGTGTATgaagcaaaatctttttgaacaGGGTCGAAGCAGGTT
TTTTAAGGAAGGATATTTAACATCAAATTGGCACATATTCTTGACATTTT
GAGACagaaaagcctctttatataTTATACTTCACTGAGACGGAGGAACT
TTTGAAGGGAATATGGTTCGGAAGATAAGATGGACATTAGATACACCATA
CATATTTCTAGAGCTATCTTCGAATGCTGAAAGGAAATCAATTCATGGTA
TCGATTTTGGAGACACTTTACATGGAATTTCCTGACTTCTTTTTCACGTA
CTTACCGACCGGAAGTTTAAGAGAAGGTTTTGGAAAGATGTTGCCATCAA
CGAGTATCTTAGCAACGGATCATGATATCATGCTTGTCCCTGATGGTGTC
ACTCTAGGTGAGCGacttttagaatgattttacaAATGCTTGACTACTGG
CATCCTCTAACAATTCATGCGTCTTTAAATAATAATTTTGCAAAGCTTTG
GAAATCAGGCACCGAATACTAAACACCTAAACAAAGttatttggctttta
gaatGTTGACTCAGATTCGGATTATATATtcggctggtcagaagacaata
ATAGAGCGACTGCGTTAATTTATGATTGTAACATGAACTACTGCTTCTTG
ACTACTAAAACTCTCTATCTTCAGGTATTCCTGGAGTTGATGATAATGGA
GGAAGTCTGAATGTCTTCTCGATTCTGGAATCACCAGAAGCTCACGTCGC
TGGATATCTCTGGTTGAAGTTGGAAGACAAATATCTCACACAATGGGATC
AATTTTGTATGAGGCGACATATCGGTAGAGAAGGTTGCAGTATTTTATCT
TCAAGTATTTGGAGAGAAAAGATTCGTcaagttttacaaaaatctaTGGA
TGTCAAGAAGTGGGTGCAGAAAATGGAGAATCTCTCTTCTGAACATGGGT
CAACCGACAATGTGCAAATTTCTGTGGAAAACAATGGGCCAGCGTTGACC
ATCGAAGTTTCAGCAACCAATGATGGAGATTTTGGTTGTTGCAATAGACG
GTCTGGCAAACGAAAGTATTTCTATGCTGATTTTACACTTGGTCTTCAGT
GTAAATCATGGCCTGAAAAAGCAAAAGGTAAGTCTGGGTGTGCTTCAATG
CCACGACTGTCTTGTCGATTCCAGTAAAATCAGTTAGATAACACTAAGAA
TACGCCTTGTCAAGCCTTGCCAACAGTATAAATTCCTTCTCCGTATGAAA
ATCCAACACTTGTTTATTCTGTAGACTACAGAAACATAACAACAGAATAA
GGTAACGATTTCTCCTAACAAATTTAGGTTTCTTCACATCACCACATCGA
GAGAATTGGCCACCAAAAGAAGCTGTGGAGGAGATaaaaaaaTTGGGATG
TCACGTTGTACCAAAATCGTCATCTAATCGACTGATCAAACTGTCTTTAG
GTAAGTAATACAAAAAGTCTTATACTAAGAGGTATCGTTCTGTGGATTAG
ATTTCATTAAATTCACCTCATGGAATTTTTTAGCTTTAGCATTTCAAATT
CGTTGGAAACGTCTGGGACAGAATGTTAATGAAGCCATTTGACAACTATT
TCAGGGTCTGGTTAAAACCGACATACAACTTTTAAACATAGATAATATGT
TTAAAAGTAAATTATTATTTGACTTTTCTACTTTTTTAGGACAATCAGAA
TGCACGAAGTTCGGTCGAAGTCCTGGACTTGAATGGCGTTACTCATTCTC
TCAAGCTGAAATCATTTTAGCCAAGCATATTCCACAACCAGTAAAATCAG
CATACTTGGCTTTCAAAGCTCTTGTTAAAAGGCATATGAATAAGAGAGAA
GGGAAGATTTGTTCGTTCGCTTTGAAATGTATCATGTTTAGACTGGTGGA
AAGAAAACCGAAAACATATTGGGAGATGGAAACGATTTGTGTGGAAAATA
CTTTCCTGTAGGTTAATATAGTCTCTAAAGAAAGAAACTGTTACAGTTGC
AAGCTTTGGTAATTCGAAAACTGCCCTGACGAGATAGTCAAATCTGTCTT
GTACATTGCATCAAAGTTAACTATTGTATTCAAATCTTATTCGTTTAAAC
TAACGTCGTTTTCTATACCGACCCTCCCCCTGTTACAGTACCCCCAATAG
GACTACTTACTCTCGGTGGAAACTTTTATCGAAATCCTCTAATGGGcaat
tttgtgcaatttttgAGCTCAATGTCTAATGGTGATAAGACCATAGGGCA
CTTTCTCAGGagggtaaatatttttttccacaaGGGACGGTTTTAGGCCA
GTTTTTGCAGTCAGGTGGAAAGCTCTACGGGCTCTGTgtcacaggggtgt
ttaaattTAAAAGCTTCACTACTAAATTCTATTATGATGGCAGATAACCC
TTTAGTAAGTGGTGGCAAATCACTGTAGcaattcttttattgtttcaCAG
AGATATGCTGTCAGCATTGGCTGGTCACCTGGAGACAGAATCATGCCCTA
ATTACTGGATCCCTGAAATCGATTTATTCGAAGAGTTGACAGAAAAGAAT
CTCCGATCAAAACGAGCATTATTCAGCATGATTCTTAAAGATCCAAAGAA
GTATGTAGCAGACGAGTGGCTGGAATATTCGAGGTACATCCGCCAGAAAT
GTTGTTATTGTGGTAACATCCAGTATGCAATCGTGGCGTTCTATGACATC
ATAGCACCTGAGGAGGACACGGGTTGTTGTGTATGTTGCCGTGTCAAATA
TTCATACAAAGATGGCGGATGTTGCTCTTCGCATGACAATTATGGCAAAG
ATCCCCTCTCTCTTGATGTTTATTAG Coding sequence (CDS) from alignment at sc0000042_pilon:1333949..1338224+ >XLOC_037568 ID=XLOC_037568|Name=XLOC_037568|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3600bp|location=Sequence derived from alignment at sc0000042_pilon:1333949..1338224+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaaagtttgaaaaaccaCAAACGTTCGAATTACGGAAGGATGAACGA
CAGCAGatggaaagtttgaaaaaccaCAAACGTTCGAATTACGGAAGGAT
GAACGACAGCAGCAATTCCTTGCTATCGATGGAAATGTCTGATACAGCTT
CATTGAACCCGATCGAATCTACAAATCCTCCACAAGACGATGATGTCATA
ATTCAACAGCCACACAATTCCTTGCTATCGATGGAAATGTCTGATACAGC
TTCATTGAACCCGATCGAATCTACAAATCCTCCACAAGACGATGATGTCA
TAATTCAACAGCCACAGGCTTCGAGCAACTTAGAAGTTGTCCATGTCGCA
CCTTTGCCAGTACAACCCTATCATATAGCTCTACCTCCAGAAATTGCTCT
GCATAGTCAAGCGAACAACTGTACATGTTTTGGATGCTTTTCTTGCTGTT
TTAATATGTGTATTCGATGGGATTGTATCTCAGAAATGACGTTATTTCAA
GCCATTCATAGATACGAAGAAGAATTCTTGCTGCCTGTACAGGGCTTCGA
GCAACTTAGAAGTTGTCCATGTCGCACCTTTGCCAGTACAACCCTATCAT
ATAGCTCTACCTCCAGAAATTGCTCTGCATAGTCAAGCGAACAACTGTAC
ATGTTTTGGATGCTTTTCTTGCTGTTTTAATATGTGTATTCGATGGGATT
GTATCTCAGAAATGACGTTATTTCAAGCCATTCATAGATACGAAGAAGAA
TTCTTGCTGCCTGTACAGAGCTATCTTCGAATGCTGAAAGGAAATCAATT
CATGGTATCGATTTTGGAGACACTTTACATGGAATTTCCTGACTTCTTTT
TCACGTACTTACCGACCGGAAGTTTAAGAGAAGGTTTTGGAAAGATGTTG
CCATCAACGAGTATCTTAGCAACGGATCATGATATCATGCTTGTCCCTGA
TGGTGTCACTCTAGAGCTATCTTCGAATGCTGAAAGGAAATCAATTCATG
GTATCGATTTTGGAGACACTTTACATGGAATTTCCTGACTTCTTTTTCAC
GTACTTACCGACCGGAAGTTTAAGAGAAGGTTTTGGAAAGATGTTGCCAT
CAACGAGTATCTTAGCAACGGATCATGATATCATGCTTGTCCCTGATGGT
GTCACTCTAGGTATTCCTGGAGTTGATGATAATGGAGGAAGTCTGAATGT
CTTCTCGATTCTGGAATCACCAGAAGCTCACGTCGCTGGATATCTCTGGT
TGAAGTTGGAAGACAAATATCTCACACAATGGGATCAATTTTGTATGAGG
CGACATATCGGTAGAGAAGGTTGCAGTATTTTATCTTCAAGTATTTGGAG
AGAAAAGATTCGTcaagttttacaaaaatctaTGGATGTCAAGAAGTGGG
TGCAGAAAATGGAGAATCTCTCTTCTGAACATGGGTCAACCGACAATGTG
CAAATTTCTGTGGAAAACAATGGGCCAGCGTTGACCATCGAAGTTTCAGC
AACCAATGATGGAGATTTTGGTTGTTGCAATAGACGGTCTGGCAAACGAA
AGTATTTCTATGCTGATTTTACACTTGGTCTTCAGTGTAAATCATGGCCT
GAAAAAGCAAAAGGTATTCCTGGAGTTGATGATAATGGAGGAAGTCTGAA
TGTCTTCTCGATTCTGGAATCACCAGAAGCTCACGTCGCTGGATATCTCT
GGTTGAAGTTGGAAGACAAATATCTCACACAATGGGATCAATTTTGTATG
AGGCGACATATCGGTAGAGAAGGTTGCAGTATTTTATCTTCAAGTATTTG
GAGAGAAAAGATTCGTcaagttttacaaaaatctaTGGATGTCAAGAAGT
GGGTGCAGAAAATGGAGAATCTCTCTTCTGAACATGGGTCAACCGACAAT
GTGCAAATTTCTGTGGAAAACAATGGGCCAGCGTTGACCATCGAAGTTTC
AGCAACCAATGATGGAGATTTTGGTTGTTGCAATAGACGGTCTGGCAAAC
GAAAGTATTTCTATGCTGATTTTACACTTGGTCTTCAGTGTAAATCATGG
CCTGAAAAAGCAAAAGGTTTCTTCACATCACCACATCGAGAGAATTGGCC
ACCAAAAGAAGCTGTGGAGGAGATaaaaaaaTTGGGATGTCACGTTGTAC
CAAAATCGTCATCTAATCGACTGATCAAACTGTCTTTAGGTTTCTTCACA
TCACCACATCGAGAGAATTGGCCACCAAAAGAAGCTGTGGAGGAGATaaa
aaaaTTGGGATGTCACGTTGTACCAAAATCGTCATCTAATCGACTGATCA
AACTGTCTTTAGGACAATCAGAATGCACGAAGTTCGGTCGAAGTCCTGGA
CTTGAATGGCGTTACTCATTCTCTCAAGCTGAAATCATTTTAGCCAAGCA
TATTCCACAACCAGTAAAATCAGCATACTTGGCTTTCAAAGCTCTTGTTA
AAAGGCATATGAATAAGAGAGAAGGGAAGATTTGTTCGTTCGCTTTGAAA
TGTATCATGTTTAGACTGGTGGAAAGAAAACCGAAAACATATTGGGAGAT
GGAAACGATTTGTGTGGAAAATACTTTCCTGACAATCAGAATGCACGAAG
TTCGGTCGAAGTCCTGGACTTGAATGGCGTTACTCATTCTCTCAAGCTGA
AATCATTTTAGCCAAGCATATTCCACAACCAGTAAAATCAGCATACTTGG
CTTTCAAAGCTCTTGTTAAAAGGCATATGAATAAGAGAGAAGGGAAGATT
TGTTCGTTCGCTTTGAAATGTATCATGTTTAGACTGGTGGAAAGAAAACC
GAAAACATATTGGGAGATGGAAACGATTTGTGTGGAAAATACTTTCCTAG
ATATGCTGTCAGCATTGGCTGGTCACCTGGAGACAGAATCATGCCCTAAT
TACTGGATCCCTGAAATCGATTTATTCGAAGAGTTGACAGAAAAGAATCT
CCGATCAAAACGAGCATTATTCAGCATGATTCTTAAAGATCCAAAGAAGT
ATGTAGCAGACGAGTGGCTGGAATATTCGAGGTACATCCGCCAGAAATGT
TGTTATTGTGGTAACATCCAGTATGCAATCGTGGCGTTCTATGACATCAT
AGCACCTGAGGAGGACACGGGTTGTTGTGTATGTTGCCGTGTCAAATATT
CATACAAAGATGGCGGATGTTGCTCTTCGCATGACAATTATGGCAAAGAT
CCCCTCTCTCTTGATGTTTATTAGAGATATGCTGTCAGCATTGGCTGGTC
ACCTGGAGACAGAATCATGCCCTAATTACTGGATCCCTGAAATCGATTTA
TTCGAAGAGTTGACAGAAAAGAATCTCCGATCAAAACGAGCATTATTCAG
CATGATTCTTAAAGATCCAAAGAAGTATGTAGCAGACGAGTGGCTGGAAT
ATTCGAGGTACATCCGCCAGAAATGTTGTTATTGTGGTAACATCCAGTAT
GCAATCGTGGCGTTCTATGACATCATAGCACCTGAGGAGGACACGGGTTG
TTGTGTATGTTGCCGTGTCAAATATTCATACAAAGATGGCGGATGTTGCT
CTTCGCATGACAATTATGGCAAAGATCCCCTCTCTCTTGATGTTTATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:1333949..1338224 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1426-1800:3902 |
| Aaloc | 1159-1422:3142 |
| Aaloc | 1036-1155:2780 |
| Aaloc | 583-1032:2127 |
| Aaloc | 385-579:1662 |
| Aaloc | 160-384:1072 |
| Aaloc | 58-156:283 |
| Aaloc | 1-54:1 |
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