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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:1306850..1310178- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037549 ID=XLOC_037549|Name=XLOC_037549|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3329bp|location=Sequence derived from alignment at sc0000042_pilon:1306850..1310178- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATAGACGCTACTCAAGCGCTCGATTTGAACGGCACGGAAGAAGA
AGAGGAAAATGAAAGGAAGCAGGTTACCTGAGCGTCAAAAAATGATTATT
TTGTTCATATAGAAGGACTATTATATTTTTCTTTCGACTGTTGTCGAAAT
TACAGGCGTAGCACGTCGAGTTTTTCAAATTATTCTTACTCAGTTTTGAA
ATATCTCTCTACGATGTATCCTTCTATGAGTATCATTAGTTACTCCCAGT
TTTTTATTGCTCAAAATATTTGATCATTCAAGACTCGACACTTTTTCTCT
CCCAACTTTAGGTGGGCAAGCTCATTACGGAACATCATAAAGAAATGCCC
TCTACCGAATTTGAAATTTATCAAGGTGTGATCACTCTCTTAGTTTTCAA
GTTTTTTCACTCTTGTCATTTTTTTTGGAGTATGAATTGGAGGATTATTT
TAGCTTATTGTGTTTCTGTTTTTTTTTTCTATATCAAATAATTTCAATAT
TATTTACTAAAGAATGAATGCTTCATTCTCATTCCATCATAGGACACAAC
ATCGTTGGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTCAAGGTACA
CAACCATTTTTTGTTTTATTTGATAAATCTTTTCAATTCACTGCTATGAA
GCTTGGCAATTTTATTTTCTTCGTGAATAAGTTTCCTTCAACTGTTTGTT
GCTTAACAGTTATTACATCCAATTGAATTTCAAGATACGTAGATTTTACT
GCTTGATTCTGAGCTATTTGGAATTTAGAAAGGCTTTGATTATGAACGGT
GGATTTCCTTCGTATCCTTATATCCAGTCCTTTCTCATTTACTTTCAGTC
GCTTTCGAAGAAGCACGCGTGTATAGAAACATCCCTTGATGGCTCCATCA
TTATTTATGATTTTGATAGCCGTAATAAAACAAGAAAAGAAAAGGTTTGT
ATGACATTTTATACTTTAGTGTAAGAAGTTTATAAAATTTTTTTATAGTA
TCTTTATAGAAGAAGGCCAACTCGTAGGATCTTTAGCATCTTTCATGGGA
CGCAACCGCGTGTCAATGTCTCGAATGTAGATGGGATTTTTAAACTTTTT
TGAGAGGTAGCCGGTAAAAAATTTATGGCATGAAACTGACATGACAAGCG
AAACTCCTAACCCACAAAATAGGTGAAAATTGACGATTTTTGAAATTTCG
TCTAAAACTTGGCCGTTTTCATATGATTTTCAACTTTCATCATCATCATC
ATTGCTCGACCGCAGTCGAGACAATGGATTCCACTCGCTGGCGCCAGGAG
TCGCGGTTGCGCATAGCAGTGCCCAGGTCGCTAAGATCAAGGCCTGTATC
CCTGCTCACCACATCTGGAAAGGTAAGTTTTCTCGATCTCTGAGCCACAC
GTTTAGGTTTCCAAAGCAATATGGAGGAAATAACCTCAGATGAGGCACGG
AAACAATGACCAGCAAATTGAACGCGCTTGACTTTAAGGAGGAGAGGGAT
TGGTTTCAAGGAACCGTATATGGTGCGTTTTGTTGGATGGTCACGCCAAG
AGAGATTTTTAACCCTTCTCAGAAGTCTGGTATAGGTACCGTCTAGTTGC
TTTTCAAACTTTTTGGTAAGGGACCAGGTTTCTGAACCATACATAAGAAT
TGGCTCAATAGTTGACTTGAAAATTTTAACTTTGAGACTAGAGTCGATGA
AGGAAGATGACCAAATACTATGCAGCTTATTGCATGCACTCCAAGCTAAA
CATTTGCGAATTTTAAAGTCTTTTTCAGAAGAAGAGATTTAAGATCCAAG
ATATTTGTAGTCTTCTACCTTTCGTAGGTTTGTACCAGATATTGTTTTAA
TATTGTCTGATAATTCGTTAACATTAAGAGTCAAATATTCGGTTTTGGAC
TCATTGAGGTATAGGTCTGTACAGTTTGCAGCAGATTCAAGAGCAATTAG
AAGATTTTGTGCATCCTCTAGGGTAGAGCTGATAAGTGCTATGTCGTCAG
CAAAGTCTGTATCTGTTAAATGAACGACAGGATTACGTGGGCCAAGCCTA
CGTTGAAGAAGAAAACCGCAGCTAGATATTTTATCAACAGAAACGCGCAT
AAGGTAATCGACAACTAGAATAAAGAGAAATGGTTTCAACTTTGAATAAA
TGGCCATATTTTTGAGTGTATGGGTATGTGCTTGATTGGTGCCTTGTATT
TTTATTTCGACTCTAAAACTTAGAGTTGCACATTTTGTCTTTAGATTGCA
TTGAAACCATACGTGCGATATGAGCTCAAACACAATGATCAAGTGACGTT
CGGAAATCTCCACGCAAAGTTCATTCATCTCGAACAAGAACAGGTATAAA
TCTAACATGTCAAAGATATTGCTCTTCGAATTTCATAATAATTTCAATTT
GTATTTTATTTAAAGACGAACCTTTGTATCATCAGTATCATCTTTACCAG
TGCAAAACTATACAATTACAATACAATTACAATTCTAACGTTTTTAACTA
AATAAAACAATCTATTGCTCTAGTGAAGCCGCCAGAAAATAGAATATGTA
GATGGCAATAACTCTGAATTGGTTAACCATAGCATCCTTCATTGTTTCAG
CGGCAAGATGACAGTGATGCCACAGGCTCCATCACTGCTTCAGAAACCGA
GTTAGAAGCAGAAGAAAATGAAGAACAACCACCACCACCACAACAAAACA
ATCACGAGAGAGAGCCGGGGAGAGTGGAAGCCAGTGATGACGCAGACGAT
GATGATGATGAGAACAGTCCTTCCATCTTCACCACGAATACAGCAGGTCA
AGTGAACAACAATGTTTTGGCGAAAAGTGATGAATTGAACTCGTCGGATA
TCGTGTTGCCTACACAAAAATATGCTTCGGAAAATCAAGATGGTATGGTC
TAAAAAGACATTATTTTTTATTGTTAACCGGTTACTTTTTCGAAGTGGGC
TACACGGGCTACACGGCTCGCAAGCTCGTCGTTACTTGACCTCGGGCAAT
ATTTCTCAGTACAGCCTTTACAAACCGGTCATTATTGTATTAATGTTCAC
CGATTCTGTTTTTGCTTTTGAATGATTTTTAGCCTTGCTAAAATTTCTAT
TACTCTGGCTATTTTTAAGGTGCTAGTTTTTGAGTATCTTTAAAACTGCC
CAGGGATTTGTGCTCTGCCCAAGCAGTCATTTCAAAGTATAGCTGTTCAT
ACATCACATTTTTTCTCCATCACAGAGGCGTACGCCAAAGACACAGACGA
AGAAGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTCCGAAGAAGCGA
GAAACAAAAGACTCACTGTGATTGGACAA Coding sequence (CDS) from alignment at sc0000042_pilon:1306850..1310178- >XLOC_037549 ID=XLOC_037549|Name=XLOC_037549|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1560bp|location=Sequence derived from alignment at sc0000042_pilon:1306850..1310178- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATAGACGCTACTCAAGCGCTCGATTTGAACGGCACGGAAGAAGA
AGAGGAAAATGAAAGGAAGCAGATGGAAATAGACGCTACTCAAGCGCTCG
ATTTGAACGGCACGGAAGAAGAAGAGGAAAATGAAAGGAAGCAGGTGGGC
AAGCTCATTACGGAACATCATAAAGAAATGCCCTCTACCGAATTTGAAAT
TTATCAAGGTGGGCAAGCTCATTACGGAACATCATAAAGAAATGCCCTCT
ACCGAATTTGAAATTTATCAAGGACACAACATCGTTGGTCGCGATGAAAA
ATCCGAAGTAAGAGTTACAGTCAAGGACACAACATCGTTGGTCGCGATGA
AAAATCCGAAGTAAGAGTTACAGTCAAGTCGCTTTCGAAGAAGCACGCGT
GTATAGAAACATCCCTTGATGGCTCCATCATTATTTATGATTTTGATAGC
CGTAATAAAACAAGAAAAGAAAAGTCGCTTTCGAAGAAGCACGCGTGTAT
AGAAACATCCCTTGATGGCTCCATCATTATTTATGATTTTGATAGCCGTA
ATAAAACAAGAAAAGAAAAGATTGCATTGAAACCATACGTGCGATATGAG
CTCAAACACAATGATCAAGTGACGTTCGGAAATCTCCACGCAAAGTTCAT
TCATCTCGAACAAGAACAGATTGCATTGAAACCATACGTGCGATATGAGC
TCAAACACAATGATCAAGTGACGTTCGGAAATCTCCACGCAAAGTTCATT
CATCTCGAACAAGAACAGCGGCAAGATGACAGTGATGCCACAGGCTCCAT
CACTGCTTCAGAAACCGAGTTAGAAGCAGAAGAAAATGAAGAACAACCAC
CACCACCACAACAAAACAATCACGAGAGAGAGCCGGGGAGAGTGGAAGCC
AGTGATGACGCAGACGATGATGATGATGAGAACAGTCCTTCCATCTTCAC
CACGAATACAGCAGGTCAAGTGAACAACAATGTTTTGGCGAAAAGTGATG
AATTGAACTCGTCGGATATCGTGTTGCCTACACAAAAATATGCTTCGGAA
AATCAAGATGCGGCAAGATGACAGTGATGCCACAGGCTCCATCACTGCTT
CAGAAACCGAGTTAGAAGCAGAAGAAAATGAAGAACAACCACCACCACCA
CAACAAAACAATCACGAGAGAGAGCCGGGGAGAGTGGAAGCCAGTGATGA
CGCAGACGATGATGATGATGAGAACAGTCCTTCCATCTTCACCACGAATA
CAGCAGGTCAAGTGAACAACAATGTTTTGGCGAAAAGTGATGAATTGAAC
TCGTCGGATATCGTGTTGCCTACACAAAAATATGCTTCGGAAAATCAAGA
TGAGGCGTACGCCAAAGACACAGACGAAGAAGAGTCAGAGAACGAGGGAG
GAGAACAAGAAAACTCCGAAGAAGCGAGAAACAAAAGACTCACTGTGATT
GGACAAAGGCGTACGCCAAAGACACAGACGAAGAAGAGTCAGAGAACGAG
GGAGGAGAACAAGAAAACTCCGAAGAAGCGAGAAACAAAAGACTCACTGT
GATTGGACAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:1306850..1310178 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 670-771:103 |
| Aaloc | 520-666:586 |
| Aaloc | 448-519:661 |
| Aaloc | 385-447:730 |
| Aaloc | 286-384:1086 |
| Aaloc | 190-285:2482 |
| Aaloc | 139-189:2786 |
| Aaloc | 73-135:3019 |
| Aaloc | 1-72:3330 |
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