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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:732634..738431- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037488 ID=XLOC_037488|Name=XLOC_037488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5798bp|location=Sequence derived from alignment at sc0000080_pilon:732634..738431- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTACGCAAGCAATGAAGCATAAAATTGAAGAAGAAAATGAAGTCCA
AACTGGAAACGACGAAAACAAGACCCCAAATAACGGAGTAAGTTTTTTTT
ATCCAGCGAACCGTAGCCATTAAGATTGGGCATTGGGCTACTGTGCGCAA
TGTCATGGGTTCAATCCCTGGCTGGGTCAAACCAAATACTTTAGAATGGT
TTTTGATACCTGTATGTCCCAATGTTCAGCAATTAAAGAGAAGGATTAAA
GGATAGCTAAGCAATCCAGGGTAAAATATTGGCGCTCTCCCTACCTTCAG
TCACCTTCAGTCACCGAAAAAGGAGCCTGTGGGTTGCCGCAGAGTGTGGT
CGCACGACTTAAGTTTGAGCCTTCATGATCTCAGGTCAGCGCTTTTATGC
AGAAGTCAGCACTTTACTTCAGTCATTTTGACTTTTTATATGTTATCACC
GTCCTTTTCGTACAAATCATACAGTTTCCTCAAAAAAGCTTGAATTCCTT
TCCTCTATACTATATTTTAGCAATTTTTTGTTCTAAAACTGTACTATTAT
TGTCGGAAAAATGTCATGTTTTTTGCTTACTAATTTTAAACAGGTCTATT
GGAATCCTGTAACATTATTACTGTATTTCTTATTATTTTTTCAGGAACAG
GAACCTTCAGCCAAGAAAGCCAAACTTGAGAATGAAGGTACAAAACAAAT
CAACACGGCTGAATCATCGGTGGTTGAAAACATCGAAGCTGAATCCAAAG
TTGGGATGAAGATGTTGATCAATAAATATCGTTTCCAAGGTAAATGTCAT
AATATCGTGCATGCCCTCATGAATAGTGTAATTCCTGTTGAAATTAAAAG
ATTAAATTAATTAATTAATTAAACCCTCTTGCAACTGCAGGCTATGCCGC
GACTGTATTTATTAGCTACATTACCTTTTTTTTTTAGCCAACTATCTTAA
AGGGATGATCAGATGGTTTGAGATATTTTGCCTATAGATAGCTTCTATTT
TTGGAAAAACTTCTAAATTTTTCGGTGTACTTATTTTCCTGACTCAAGTT
ATACCACTTTGAAATATTGAACCTTTGCTTGAAAACAATAGAAAAGAGTT
TGAAAAGTCCCTGAAAAGTCCCATTTTTCGAGATTTCAAATTGGCATAAC
TTGAGTTAAGAAAATAAGTACACCGAAAAATTTAGACGTTTTCCCTAAAA
TCCTAGAAGCTATCTGCAGGCAAAATATCTCAGACCATCTGATTATCCCT
TTAAAGCCAACGTTAGATAAAAATGAAAATTCAAGAAAAAAACCATTTCA
AAAGCTTCCCTCTTCTCGATTTTAACTAAAATCCTGATTCATATTTTCTC
GATCTTTTGTATGTATTTTTCAGGCATAATCAAGCAAAGGTTTTCCGACT
TTATGGTTCGTGAAATTGATTTGGATGGAAACAAAACCTTTCTAACAGAC
ACCAATCATGTGGATGATCAAAAGCCGGCTACAGAATCGAACAAAGGAGA
ACCAAAAGAGATGAAAGATACAACATGCCCAATAGATGATGTGACATTGG
TGAAACGAATTGATGATTTTGCCAAGAATGAAAGTGAAGAAACATTGGAC
GACCGGATCACATTTCTTAATAATGATAAAGAGAACAGAAAGGCTTGCCA
TATGTACTTCAAAACTAAATATCAAAATCTCGGTAAGTCCTATAATAATT
GTTTTTCAATCCGAGTCGCTAGAATCCTTTGAATCCTTCCAGGCAACAGT
AATTCTCAATCAAAATGCAAAAGTGTCACTCGTTTTTTTCTACCGTGTGG
AAATTCTCAAGGGAAGAAGTGTCTAGGATTACATTGACATGGTTTCTACC
TGATAGAAAAAAAAGAGTGTATATTTAAAGATGGATTGAGATAAAAATTG
AAAGAATTTCACTTCAAGTATTGAAAACATTTTTGAATGTTTCATCTTTA
TAGAAACGGATGTCATCAACAAGGAAAATGATACTCGTGAATTTGTTATT
TACTACAAGAAAAGTAAAAAGGGTGACCCCCGTGCACGTAAGAACAGAAA
CACAGAGGGCCAATTCTGCCATTTTGTTTTACACAAACAAAACAAAGATA
CCATGGATACGATTAATCTGCTGAGTAAGAAGTTAAGAATCACTTCAAAA
CTATTCTCGTATGCCGGCACGAAAGATCGGCGCGCAACCACAATACAACG
CGTGGCCGTCAAACAGTGCCGTTCGAAACGCTTAAAGGAACTAAACAAAA
TACTTATCAATATCGTGTTGGGGAATTTCCAGTACAAATCAGAACCATTA
AAACTCGGTGATCTCTCTGGGAATGAGTTCACTTTGATCATACGAGACGT
CACAAATGCAACGGAGAATCAAATTATGGATGCGTGTCGCTCACTTCAAG
AGAACGGATTCGTCAATTATTTTGGTTTGCAAAGATTTGGTACTGGAGGT
GCCGGCACTCATGAGATAGGTATGTCAGCCAATTTTGTATGTCACCCAAT
TATGTATATGTGTATTGATTCTTTTGGGCTTTGGCAAGGTCCGTCTAATA
GAAGTTTATATGCAAACTCGACAAATTAGACGTGCGAAAGAAAAAGAGTG
CATAAACTTACACATGTACCACTTTCACTAAGAAAAAATAATACTTTAGG
TATACAAAATTTCGCGAGCAGAAATTTTCGAGATTTTCGCGAATTTTGGC
CTTTTTCCGCGAAAGTAAATGTCCGTTGAATATTCCTTAAAGAAGTGATT
TGCGTTAGTTTATGCTCGCGAAAGTTTGTACGCCTAAAGTATACTCCAAA
TCTTTTACAGCTGTATCATCTACATAACCTTACGTGTTCTCTTACTTTGA
AAACAACTTTCACAGGTAGAGCATTATTGAAGGACGACTTTGAAAAGGCG
TGCAACCTCATCCTAGCGGAGCCGTCAGAAAACGATAACGATAGAAGCAA
AGAACGAAATGCGCTCAAAATTTACTCCAACAACAAAGATCCACAGAAAG
CCTTCCAAGCCTTACGAAACAGGAACGGGATTGAAGGGAAATTGTTGTCC
TGCCTGAAGAACTCACCTAAGGATTTTCTAGGCGCATTGGGTAGACTACC
ACGTAACACACGATTGCTTTATCTGCATAGTTATCAAAGTTTCATTTGGA
ATAATGCTGTATCTTACAGGCTTGAGGTGAGTGATTTTACGCAGAAAGTT
TCAATGTAAAAGAAATGTGCCATGTGTTGTGTAACTTTCCCAACAAAGTG
TCTTCTCATTTTTAATTGATGTTACAATCGTGACCCATGAAAAAATTCCT
TGTTCAAACCAAAGAATCTATTGTTTTAATCTATTGTTTTGGAAAATTTC
TTTATGTACCCTGTAGGAGTAGCAAAGTTTTTATGTACTTTCGGGTACCT
AATAATTGGAATAAGCGAGGTGGGTGGAAAAATTCTGAAAACTTAATAAG
GGGGGGGGGGGCGGAATAAAAATGTCATGGGTGGAAAATTTTTGGGTAAT
ACAGCAGAATTAGGACAAAAGAGGGAATTTAAAAAAACATTTTCTCAAGA
ATTAATAAGCGGTGGAGGGACGCTTTTTAGGTACCCTTATTATGTACCCG
AGAGTAAATTTCCAGTTTTGACATCCGCATTTTTTCTTTTTACAGAAGTT
TGGATTCAAACCAGTGGTTGGAGATTTGGTATTGACGTCAGAAACAGGTA
CAGATATGGATTTAGTTCAAATTAGGAAACAGAACTTTTAAAAGAAAAAA
TGTGAACAATTTTGATAGATAATTGTCAATTGCTACCTGTTCAAAGAATA
CTTCAACTATCATTTATCTCTAACATAAGAAAAAGGCAAGAAGGACCTGT
CAAAAGACAAACCAGAGAGGACCTATCTATTCATTATTTTGGGCCTGGTA
TTGGGCCATTTCATTTTATATCCATACAGTAGGAGGGGGGTTGGACGAAC
ATTTCCAGGTGGAGGTTATCAGAAAAGAAGTTCCACGGGGTATAAAGGAG
TATTTTTTCATTTTTCCAGGGGTTAAAAGGTTATTCTATAATTTCCAAAG
GATAAAAGACTGATTTTAGTTCGTCAACCCTCACTTCTAAGATATAAAAA
GATTTTTCCAAAGGTTTCTTTACAATTCTTGCCATTTTCCAGGGGGTATC
CTATCCATATATTTCTAAGAATCTTTTATGGCCTTAAAAAGTTCGCCCAC
CACAATGTTAATTAAATGGAATTGCTGCCGAATTTAATTTTTTTCCTAAA
GAACGCTAACAATAAATAAAAAAGATGAGGATCATTTGAAAGCTATGATT
CTCCTTCACCGTAGATGAAGAAGGTCATAAGAAGGCGAGACTCCTGACAG
AAGATGATATCGCTTCCAACACATTCACTATTGAAGACATAGTTCTTCCT
ATGCCTGGTTATGACGTCATCTATCCCAATAATTCGTGTTATGATTACAT
GAAATCGTTGATGGAGAAAGATGGTTTAGACATCACAAACATGAGACGAG
CACAAAAGGATAATTCCTTGTCTGGAGCATATAGGTATGTTCTAGTTGAT
GCTTTGGTTAAGTCGTCCAGGGTCACGTTTTATTGCTGGGAATATACCGG
CCCATTAGCGCCAGGTGGTTGTTAAAAAAATCATTTTCGCAATGTATTTA
TATGTCACTTACAACCAATCAGCTATTGGGTCCGTGATGTAATGTCAGAA
AACATTGCAATGGAGCACGTCATGAACAGACAAATTAACAGTGTTTTAAA
GAACTTTTTACAATTTTTACTCTATTTAGGACGTTTTTAGTGAAACCGAA
AAATATGATGCTTTGGTTAAGTCGTTCACGGTCACGTTTTACCCCTGGGA
ATATACCGGCCCATTAGCGCCAGGTGGTTGTTAAATTCGGAATAGTTTCC
AAAAAGGGGGAGCGTTCTAATTGTTTAAAATCGAAAACTCATGGTCTTCG
CAATGTATTCATGATATGCGCCATTGCAATCTCTTCCATGGACCAAACAG
CTGATTGGTTGAAAGTGACGTATTGACTGAATTTACGTCACTTACAACCA
ATCAGACATTGCAATATGGTGCATGAATAGACTAGGATGGTGAATTACTC
CCTGACTGAAATAGCTTGACTTCCCACGAAATAATTTTGTTGACGGCAAA
TTAGCAGTGTTTTAATTAGAACTTTTTACAATTTTTACTCTATTTAGGAC
GTTTTTAGTGAAACCGAAAAATATGACTTGGGAATTAATGCGCTATGATG
ATTTTACTATATCGCTAATTGAAAATGATGTCGACAAAATGAAGAAGTCG
GAAGAAGAAGAAAAGACCAAAACGAAAAATGAAAATGAATGCAAGAAAGA
ATCTGGAGAGGAAATTGGTGAAAATATGAAAGCAAAATCATCAGGGGACA
GTGAAACTATTAAGATTGGAAGTGGTGTTGATTTTGCTGTTGGTGCAGAC
GATGGAAATAAAATTATTATCTCAGATGACGAAAATGAGGCTAAAAATTC
AACGGAGACGAAAATCACTGAAATTGAAAGTTCCGTAAATTCCGTAAATT
CTGAGCCTGACAAAAGTGGAAAATCGGAGTCTGCAATGGAAACAGATTCA
AAAACTGAGGCTGATATCAATGATAAAGACTCTAAAACTCTTGGAGTTTC
TGATGGCAAGTATTTAGCATTGAAATTGATTTTTCAACTGCCATCGTCTT
GTTATGCGACCACTGCTCTTAGAGAATTACTAACCAGTGATTCGTCTTTC
AAAGCACAACAACAGTTGAATGCCAACTTTAATAAGAAGAAAATGTGA Coding sequence (CDS) from alignment at sc0000080_pilon:732634..738431- >XLOC_037488 ID=XLOC_037488|Name=XLOC_037488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4482bp|location=Sequence derived from alignment at sc0000080_pilon:732634..738431- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTACGCAAGCAATGAAGCATAAAATTGAAGAAGAAAATGAAGTCCA
AACTGGAAACGACGAAAACAAGACCCCAAATAACGGAATGAGTACGCAAG
CAATGAAGCATAAAATTGAAGAAGAAAATGAAGTCCAAACTGGAAACGAC
GAAAACAAGACCCCAAATAACGGAGAACAGGAACCTTCAGCCAAGAAAGC
CAAACTTGAGAATGAAGGTACAAAACAAATCAACACGGCTGAATCATCGG
TGGTTGAAAACATCGAAGCTGAATCCAAAGTTGGGATGAAGATGTTGATC
AATAAATATCGTTTCCAAGGAACAGGAACCTTCAGCCAAGAAAGCCAAAC
TTGAGAATGAAGGTACAAAACAAATCAACACGGCTGAATCATCGGTGGTT
GAAAACATCGAAGCTGAATCCAAAGTTGGGATGAAGATGTTGATCAATAA
ATATCGTTTCCAAGGCATAATCAAGCAAAGGTTTTCCGACTTTATGGTTC
GTGAAATTGATTTGGATGGAAACAAAACCTTTCTAACAGACACCAATCAT
GTGGATGATCAAAAGCCGGCTACAGAATCGAACAAAGGAGAACCAAAAGA
GATGAAAGATACAACATGCCCAATAGATGATGTGACATTGGTGAAACGAA
TTGATGATTTTGCCAAGAATGAAAGTGAAGAAACATTGGACGACCGGATC
ACATTTCTTAATAATGATAAAGAGAACAGAAAGGCTTGCCATATGTACTT
CAAAACTAAATATCAAAATCTCGGCATAATCAAGCAAAGGTTTTCCGACT
TTATGGTTCGTGAAATTGATTTGGATGGAAACAAAACCTTTCTAACAGAC
ACCAATCATGTGGATGATCAAAAGCCGGCTACAGAATCGAACAAAGGAGA
ACCAAAAGAGATGAAAGATACAACATGCCCAATAGATGATGTGACATTGG
TGAAACGAATTGATGATTTTGCCAAGAATGAAAGTGAAGAAACATTGGAC
GACCGGATCACATTTCTTAATAATGATAAAGAGAACAGAAAGGCTTGCCA
TATGTACTTCAAAACTAAATATCAAAATCTCGAAACGGATGTCATCAACA
AGGAAAATGATACTCGTGAATTTGTTATTTACTACAAGAAAAGTAAAAAG
GGTGACCCCCGTGCACGTAAGAACAGAAACACAGAGGGCCAATTCTGCCA
TTTTGTTTTACACAAACAAAACAAAGATACCATGGATACGATTAATCTGC
TGAGTAAGAAGTTAAGAATCACTTCAAAACTATTCTCGTATGCCGGCACG
AAAGATCGGCGCGCAACCACAATACAACGCGTGGCCGTCAAACAGTGCCG
TTCGAAACGCTTAAAGGAACTAAACAAAATACTTATCAATATCGTGTTGG
GGAATTTCCAGTACAAATCAGAACCATTAAAACTCGGTGATCTCTCTGGG
AATGAGTTCACTTTGATCATACGAGACGTCACAAATGCAACGGAGAATCA
AATTATGGATGCGTGTCGCTCACTTCAAGAGAACGGATTCGTCAATTATT
TTGGTTTGCAAAGATTTGGTACTGGAGGTGCCGGCACTCATGAGATAGAA
ACGGATGTCATCAACAAGGAAAATGATACTCGTGAATTTGTTATTTACTA
CAAGAAAAGTAAAAAGGGTGACCCCCGTGCACGTAAGAACAGAAACACAG
AGGGCCAATTCTGCCATTTTGTTTTACACAAACAAAACAAAGATACCATG
GATACGATTAATCTGCTGAGTAAGAAGTTAAGAATCACTTCAAAACTATT
CTCGTATGCCGGCACGAAAGATCGGCGCGCAACCACAATACAACGCGTGG
CCGTCAAACAGTGCCGTTCGAAACGCTTAAAGGAACTAAACAAAATACTT
ATCAATATCGTGTTGGGGAATTTCCAGTACAAATCAGAACCATTAAAACT
CGGTGATCTCTCTGGGAATGAGTTCACTTTGATCATACGAGACGTCACAA
ATGCAACGGAGAATCAAATTATGGATGCGTGTCGCTCACTTCAAGAGAAC
GGATTCGTCAATTATTTTGGTTTGCAAAGATTTGGTACTGGAGGTGCCGG
CACTCATGAGATAGGTAGAGCATTATTGAAGGACGACTTTGAAAAGGCGT
GCAACCTCATCCTAGCGGAGCCGTCAGAAAACGATAACGATAGAAGCAAA
GAACGAAATGCGCTCAAAATTTACTCCAACAACAAAGATCCACAGAAAGC
CTTCCAAGCCTTACGAAACAGGAACGGGATTGAAGGGAAATTGTTGTCCT
GCCTGAAGAACTCACCTAAGGATTTTCTAGGCGCATTGGGTAGACTACCA
CGTAACACACGATTGCTTTATCTGCATAGTTATCAAAGTTTCATTTGGAA
TAATGCTGTATCTTACAGGCTTGAGGTAGAGCATTATTGAAGGACGACTT
TGAAAAGGCGTGCAACCTCATCCTAGCGGAGCCGTCAGAAAACGATAACG
ATAGAAGCAAAGAACGAAATGCGCTCAAAATTTACTCCAACAACAAAGAT
CCACAGAAAGCCTTCCAAGCCTTACGAAACAGGAACGGGATTGAAGGGAA
ATTGTTGTCCTGCCTGAAGAACTCACCTAAGGATTTTCTAGGCGCATTGG
GTAGACTACCACGTAACACACGATTGCTTTATCTGCATAGTTATCAAAGT
TTCATTTGGAATAATGCTGTATCTTACAGGCTTGAGAAGTTTGGATTCAA
ACCAGTGGTTGGAGATTTGGTATTGACGTCAGAAACAGAAGTTTGGATTC
AAACCAGTGGTTGGAGATTTGGTATTGACGTCAGAAACAGATGAAGAAGG
TCATAAGAAGGCGAGACTCCTGACAGAAGATGATATCGCTTCCAACACAT
TCACTATTGAAGACATAGTTCTTCCTATGCCTGGTTATGACGTCATCTAT
CCCAATAATTCGTGTTATGATTACATGAAATCGTTGATGGAGAAAGATGG
TTTAGACATCACAAACATGAGACGAGCACAAAAGGATAATTCCTTGTCTG
GAGCATATAGATGAAGAAGGTCATAAGAAGGCGAGACTCCTGACAGAAGA
TGATATCGCTTCCAACACATTCACTATTGAAGACATAGTTCTTCCTATGC
CTGGTTATGACGTCATCTATCCCAATAATTCGTGTTATGATTACATGAAA
TCGTTGATGGAGAAAGATGGTTTAGACATCACAAACATGAGACGAGCACA
AAAGGATAATTCCTTGTCTGGAGCATATAGGACGTTTTTAGTGAAACCGA
AAAATATGACTTGGGAATTAATGCGCTATGATGATTTTACTATATCGCTA
ATTGAAAATGATGTCGACAAAATGAAGAAGTCGGAAGAAGAAGAAAAGAC
CAAAACGAAAAATGAAAATGAATGCAAGAAAGAATCTGGAGAGGAAATTG
GTGAAAATATGAAAGCAAAATCATCAGGGGACAGTGAAACTATTAAGATT
GGAAGTGGTGTTGATTTTGCTGTTGGTGCAGACGATGGAAATAAAATTAT
TATCTCAGATGACGAAAATGAGGCTAAAAATTCAACGGAGACGAAAATCA
CTGAAATTGAAAGTTCCGTAAATTCCGTAAATTCTGAGCCTGACAAAAGT
GGAAAATCGGAGTCTGCAATGGAAACAGATTCAAAAACTGAGGCTGATAT
CAATGATAAAGACTCTAAAACTCTTGGAGTTTCTGATGGCAAGTATTTAG
CATTGAAATTGATTTTTCAACTGCCATCGTCTTGTTATGCGACCACTGCT
CTTAGAGAATTACTAACCAGTGATTCGTCTTTCAAAGCACAACAACAGTT
GAATGCCAACTTTAATAAGAAGAAAATGTGAGACGTTTTTAGTGAAACCG
AAAAATATGACTTGGGAATTAATGCGCTATGATGATTTTACTATATCGCT
AATTGAAAATGATGTCGACAAAATGAAGAAGTCGGAAGAAGAAGAAAAGA
CCAAAACGAAAAATGAAAATGAATGCAAGAAAGAATCTGGAGAGGAAATT
GGTGAAAATATGAAAGCAAAATCATCAGGGGACAGTGAAACTATTAAGAT
TGGAAGTGGTGTTGATTTTGCTGTTGGTGCAGACGATGGAAATAAAATTA
TTATCTCAGATGACGAAAATGAGGCTAAAAATTCAACGGAGACGAAAATC
ACTGAAATTGAAAGTTCCGTAAATTCCGTAAATTCTGAGCCTGACAAAAG
TGGAAAATCGGAGTCTGCAATGGAAACAGATTCAAAAACTGAGGCTGATA
TCAATGATAAAGACTCTAAAACTCTTGGAGTTTCTGATGGCAAGTATTTA
GCATTGAAATTGATTTTTCAACTGCCATCGTCTTGTTATGCGACCACTGC
TCTTAGAGAATTACTAACCAGTGATTCGTCTTTCAAAGCACAACAACAGT
TGAATGCCAACTTTAATAAGAAGAAAATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:732634..738431 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1642-2241:601 |
| Aaloc | 1423-1638:1483 |
| Aaloc | 1369-1419:2154 |
| Aaloc | 1060-1368:2932 |
| Aaloc | 544-1056:3844 |
| Aaloc | 235-540:4424 |
| Aaloc | 88-231:5155 |
| Aaloc | 1-87:5799 |
|
