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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:205089..210327- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037414 ID=XLOC_037414|Name=XLOC_037414|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5239bp|location=Sequence derived from alignment at sc0000059_pilon:205089..210327- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAAGGCGAGGCAGTATGCCCTCAGCGTTGCATAGCCAAAGGTGAGA
TAAATTTGCTACCTTTGGTAGAAATGATGATAGAATTTTGAAGGGCCTGA
GGCACATTTTAGTATTCCCAATTGAAGTACTACGCTTCTTACTAAAACTA
CCATTAAGCTCCTTGGACCAAAGGTTTTTTAACATTCGTATGTTTCCTTT
ATTTACTTTTTTGTCTTTAAATTGAATTATGTGTATAGATGGAATGTGAT
AAAAAGGTCCCCTTATTTTCTTTGAGCCATTTTTCCTATTTTTCAGATGT
TTTCAAAAAATAATAAGGGGCTTTCTTTCAAAATAATAGCTCTTTTATAG
AGGTTTCTTTTTCTATTTACTTGGTTTAACAATAACTAATGAAACAGCAG
ACCTTAAGCTTATGCATAATTAATTGTTCAAATGTGCTACTGTTTTTTCT
TTTGATTTTTTTTTTGAAAATTTCTATAGTCGTCTCTCTCTTTTTCTATC
TCATCATCAATACTAGTAAGAAAGTAGAATGGTGTACTAGTAGTCACAGG
AGAGACAGTTTATATGTTTTTGATAATAAAGAAGAATCTTTGATTTTATT
TTAAAAAGTAAAATTTGCAACGATTATTTTGAGGATCCTGCTTGGGTAAA
TTGGGTAATAACTGTTTACTGTCTTGGCTTCATTATTTTGAATTATTTTT
GGCTGTATATTTTGGACTAGAAACTTTTATCAAATAAGGATTGTTATGAA
CGTTTGTTATCCTATTATAAAGTTTCATAGAAAAGGTTTTTAGCAATAAA
TCAAAACAGAAGCTTGAGTTTCCTTTCAATCTTAAAAAACACCAGACTGT
GATATTTCATTGTGCTGCTGTTTGGTATCTTAAAATTGTGAAATCTCTAG
ACAAACAAAGAGTTTTCATAGGTAGATTTAATCTTTTTTTTCTCCATGTT
TTCCACCCTAATACTAATACTTTTTTTCTGTTTTTATATATCAAGCATTC
AGCCAAACTGGCCAATGAAGCAAAAATTCAGAGGGAAACGGTTAGTTGTC
AAAAGCACTCTCGTATTATATCTACGTAAATCTTAATAACTTCTAATAGA
AATGGCTCTTATCATACTTTTTTTGCAGCTATTCATTAGAAATCAACAGA
GTAACTTTAGGAAATAAATGAATCCTTTCGATTCCACCTGATACATTTAT
TCCTTTAGATAGTCACAGGACTTGCTATAACTGTTACTTCGATAATTTTT
TTCTTCATATTTTAGCATTTAGTCTGTTTTTTATTATATATAATTTACTT
TTTTAGACAACCTGCTTACTATCTTCAACCGGATTACCGAATCCATGAAT
TCAATAAGCGTTTGCAGGGCCAAAGTGATGTAAGTTCTTGAGAGCCAAAC
TAACTCTTTAAAATTGACACATTTCCAAGACTTTTTGATTAAAAAAACAA
CTTGGGCATGTGTTGCAACTGATTACTATTGAATTACAATGACTCCACTC
AATCCTACTAACTTTTCTTGGTGAAAATAAAAATTATTTCAAACTTCAAC
ATTCCATCCAGCCATAGTATGTTGGATGGATTGTTGTAATTTTCTATTCC
AGCCTTAAAGATATTCTTTTTCACGGTATTGAAATTTGTGCGCCACTTAT
GCTGACAAGATAAAATAAACAAACTAATTTCTCAAAATTTGTGTTCTCTC
GTCGCGGGAGGGAGAAAGTTCTTAATTCTTTTGTTTGAACTTTGTAAGCA
AGTAGTAGGAGATAAATGATGTATTATCGTATTCTCTTAACAGAAAAATG
ACCAAACATGGTGGGACGAGTTGATCAACGAATTCTTTGAGGAAGATGCA
TCTCTCCTCATCCAATACAAAGAGAAAAACCACAACAAAAAATTAAGTGA
GTCTTCTTAAGTTTAAATTGATTTGAGATTACTTTTTTAAATCAAGTATA
GCTTACCAACTCCTCGTTTCCCATGAGATCTAATGTTTTTTGATAAATCA
GTATTTCAAAGGAACTACATAGGGATTAACATAGTTTAGCAATATATTAT
TATTTATTACAGTGATCCACAGGCGGCTGATACCCCGATACTTTCGCAGT
CTGTTTGAAGGAGGTGTTTCAAAGATCTATTATGTGGTCTTGGAGTCAAA
AGAGAGTTACATGAATGCCACGGTATCCGTGGACTGCAAGCATGCTAGCA
TGATCACTCACTTTGATCAACCCAAAAATCTAAAGGTATGATTTATTTCG
ATGTACTTTAACTTTAGCTATGCTAGAACCATATAAGAAATGTCTATGTG
GTTATCTAATTATGCTTTTTGTTTCCAGCTGAACTTTCAGGAAGAAAGGA
TTTTTAATCCCCTCTTACATTTATTGGGCTTTTCCGGGAAGTAGCATCGT
CAATCAAACCTCTCACAAAGTTTTCACAATCACCACCGAAAAACTAGATG
ATATAATTTCATATTTTACTTTCAAGCATTTAGCGAAGTATAATTTTGTG
AACTCAATAGCTTTGGGTCGTCAACATACTGGGAATTTATGCCTGTCCAA
CCACTATCCTTTTGTTGGGTATATTAGGCTGAAAACAGTATAGACTAGGT
CTGTTGGTTCTTTATTGTCGTGAAAATAAAGGACTTCGAGATAATGTAAT
CCATCGAAGCTGAAATCCTGGAAAGTAATCGAGTACATTACTTCGAGAAA
TTTCAAAGTAAAAAGTTTCCTACTGAAATGAAAGACTTGAACCTATGTTG
GGTTACTTTCCCTGCTCAGAATAAATTATTTTCAATCTCTTATGTTTTTT
TAGGTTCATACGGACGGTCATTTAACGATCGAGTTTGCGTTCGATTCTTT
CATGAGGATTCGGCATTGGAAATTCATTGTGAAGGACACTACAGAGTACC
TTCCCAAATCTTCCTTCAACGAAAAAGACGAATCGAAAGCCGAAGAAATG
GCAAAGAATGTCATGGAACACGGTCAACCACCAAAGTCTCTACACTATCT
ACGTGTAAGTTTTTTTTTTTTTTTTTTTGCTACACCTCAAGTCATAAAAT
TCCCGTTTTTCTTTGAAATTAATTTTATTTTTACATAAGTGTTCTCGTTT
CATACCAGACACATTTTATTTCATATCAGAACGGTGTCTCTCTATTGTTA
TACATGTTGTTCTTTTTATAAGCAAGTGTATGCCCCTTGGTCAGGCTCGT
GTATGCTTAAGTTTTCAAAGCATTCAGGCATAGATTATGCTTATTATATG
CTTATGAATCATGATTATGATTCACCTCGAGCCAAGTTTTTAGTGAAATT
TCAGAAATTTTGTAAAAATTTGTTCAGATTTTGGGAGCAGTGGAATGTAG
GAAACCGTGGAAAGTCTTTTTTACATTTGACCTCTACCAAACATTTTTAA
ACCGATAAAAATGACAACTTGAAAAATATTTCAGGCTGACATATATGCTT
ATGTTATGTTTAGGAATTCTGCAAATCTGAGCCTTCATATGCTTATAAGC
GTTATGCTTATAAAAAAATAACATGTATTTTGCTGAATAAACAAAAAATT
GTTTTTCTTTCCTCTTTCTGACCAATTTTGCTCCACATCCGTGTTAATTC
AATGCGAAAAAGCTTGTAGATCAAAATTGATGAGTAAACAAACGATGTCA
CTCTTATTCAGAAACAAAAATTTTTAATATCTTTTTTTCAACACATCAGA
TAATAAACCTGTTCGTTTTAGCGAATTCAAAATATTACATTTACAGTATT
GTCAATAATCGTTGTTGTAAATGGTCTTAATTTGATTCCTCCTCGTTAGG
TTGGAACGGTACTCGAGTCAATGTTTGAAATGATGGCAAGAGCGAAATCT
GGCACCATGACACCCAGAGGTAGCATTCAAAATTTTGAATCCTTGCAAAA
TTTCGAGTGTCTTCAGTTTTATCACAAACTTTCTTTCAATGTTTCCTTGT
AATCCTACATTACTGGATCTTTAATCTTTTTAATAAACCTTTAAAAGGTA
CTGGAGTAATGACAAGTTCCTTTTAAATTTATTAATATATTTGTGTTTTT
TGCAGAGGCTTTGAAGAGTGTGTTATATGACAAATGGCAAGCAACTATGC
TGAAAATGGGTAAGTACCTTTTGCTTTAGACTTTATTCATACGCGAGTAT
AAACATTAGAAAAACGAAAGCCTACCAGATCCGAATTTTGTACGCAGACT
TTGATTTTAAGTTATCCTATTTTTCTTCCATTTTGATACAAGAAACCCGT
AATAAAATTACACCAAGGAATTTTTCAAACTTTCTAATTGTTATATATTG
AATTACTTTCTCCTTTTAAGAATTCGAAACAAGACATCGAATTTGGAACC
AAAATACTCGTGAGTAGTTTCTCTTCTCTTTCCATTCTTCTCAAAACGAA
GCAATGGTCAGAAAGATGCCTGATTAGTTTCTGGAAGTTAACTTTCGGTA
TATTATGGAATCGAAATACGAACATTTAATACATGATAACCCTATGGTAG
GGTGTGTGATGAATTTTCTTTTGAAATACGTTATCCGAATAAATTAGATA
AAAATATTTTTAAAAATTCCGTTTGCCCCACCTGTTTGTAAAATCAATTT
TTATAGAAAGCCTTCCAAAGTGATAAATATGACAGTAAGCCATGGTTATT
GCTATTGGCGGCTCTGAAATAGAAAATTTAGGCTTGGTATAGTATCTTTC
CAACTTTCATCCTCTTTCAAACACTTATTTGTCTTCTCTTTTAGAAAGCA
GACCTAACAACAAGAAGCGCAAAAACCGAAAAACGCCCTCCGTTTCAAAC
GAGCCGAAGCCGCCTCCGAAAAAGAAATCACCCTCAACATCCGCCTTTCC
ACCCATGTCAACATCAGACGTGATGTTTGTCGATGAGCCTGTTCTGATGG
GCGGCGAGCTGGGAGACGATGACGAAAGAGTCATTACAAGGTAGGGACTT
CCTCCTGACTTAGTCCTTTACATTTGATGTTTTGAATACGAAGCCAGGTC
CCTTTTAATTAGTCTTGCAAAATTTTAGCTAGGGAAGATTGGGGGCCCCG
GAGTAAAAAGAACTTTTCAGACCTAACAAAAAGTCCCATTTACACTTCTT
TTTTCCATACTGCTGTAGATCTATCGTATCAAATCCGAGCAGCAGGCTAC
TACTATCCACCACTTCTTCAACAAATATTCAAATGCTACAGCAGTTCACA
AAACAAACTACTCAACAATTAACACAAATGCACAGTTAG Coding sequence (CDS) from alignment at sc0000059_pilon:205089..210327- >XLOC_037414 ID=XLOC_037414|Name=XLOC_037414|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2238bp|location=Sequence derived from alignment at sc0000059_pilon:205089..210327- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAAGGCGAGGCAGTATGCCCTCAGCGTTGCATAGCCAAAGATGCTA
AGGCGAGGCAGTATGCCCTCAGCGTTGCATAGCCAAAGCATTCAGCCAAA
CTGGCCAATGAAGCAAAAATTCAGAGGGAAACGCATTCAGCCAAACTGGC
CAATGAAGCAAAAATTCAGAGGGAAACGACAACCTGCTTACTATCTTCAA
CCGGATTACCGAATCCATGAATTCAATAAGCGTTTGCAGGGCCAAAGTGA
TACAACCTGCTTACTATCTTCAACCGGATTACCGAATCCATGAATTCAAT
AAGCGTTTGCAGGGCCAAAGTGATAAAAATGACCAAACATGGTGGGACGA
GTTGATCAACGAATTCTTTGAGGAAGATGCATCTCTCCTCATCCAATACA
AAGAGAAAAACCACAACAAAAAATTAAAAAAATGACCAAACATGGTGGGA
CGAGTTGATCAACGAATTCTTTGAGGAAGATGCATCTCTCCTCATCCAAT
ACAAAGAGAAAAACCACAACAAAAAATTAATGATCCACAGGCGGCTGATA
CCCCGATACTTTCGCAGTCTGTTTGAAGGAGGTGTTTCAAAGATCTATTA
TGTGGTCTTGGAGTCAAAAGAGAGTTACATGAATGCCACGGTATCCGTGG
ACTGCAAGCATGCTAGCATGATCACTCACTTTGATCAACCCAAAAATCTA
AAGTGATCCACAGGCGGCTGATACCCCGATACTTTCGCAGTCTGTTTGAA
GGAGGTGTTTCAAAGATCTATTATGTGGTCTTGGAGTCAAAAGAGAGTTA
CATGAATGCCACGGTATCCGTGGACTGCAAGCATGCTAGCATGATCACTC
ACTTTGATCAACCCAAAAATCTAAAGGTTCATACGGACGGTCATTTAACG
ATCGAGTTTGCGTTCGATTCTTTCATGAGGATTCGGCATTGGAAATTCAT
TGTGAAGGACACTACAGAGTACCTTCCCAAATCTTCCTTCAACGAAAAAG
ACGAATCGAAAGCCGAAGAAATGGCAAAGAATGTCATGGAACACGGTCAA
CCACCAAAGTCTCTACACTATCTACGTGTTCATACGGACGGTCATTTAAC
GATCGAGTTTGCGTTCGATTCTTTCATGAGGATTCGGCATTGGAAATTCA
TTGTGAAGGACACTACAGAGTACCTTCCCAAATCTTCCTTCAACGAAAAA
GACGAATCGAAAGCCGAAGAAATGGCAAAGAATGTCATGGAACACGGTCA
ACCACCAAAGTCTCTACACTATCTACGTGTTGGAACGGTACTCGAGTCAA
TGTTTGAAATGATGGCAAGAGCGAAATCTGGCACCATGACACCCAGAGGT
TGGAACGGTACTCGAGTCAATGTTTGAAATGATGGCAAGAGCGAAATCTG
GCACCATGACACCCAGAGAGGCTTTGAAGAGTGTGTTATATGACAAATGG
CAAGCAACTATGCTGAAAATGGAGGCTTTGAAGAGTGTGTTATATGACAA
ATGGCAAGCAACTATGCTGAAAATGGAATTCGAAACAAGACATCGAATTT
GGAACCAAAATACTCAATTCGAAACAAGACATCGAATTTGGAACCAAAAT
ACTCAAAGCAGACCTAACAACAAGAAGCGCAAAAACCGAAAAACGCCCTC
CGTTTCAAACGAGCCGAAGCCGCCTCCGAAAAAGAAATCACCCTCAACAT
CCGCCTTTCCACCCATGTCAACATCAGACGTGATGTTTGTCGATGAGCCT
GTTCTGATGGGCGGCGAGCTGGGAGACGATGACGAAAGAGTCATTACAAG
AAAGCAGACCTAACAACAAGAAGCGCAAAAACCGAAAAACGCCCTCCGTT
TCAAACGAGCCGAAGCCGCCTCCGAAAAAGAAATCACCCTCAACATCCGC
CTTTCCACCCATGTCAACATCAGACGTGATGTTTGTCGATGAGCCTGTTC
TGATGGGCGGCGAGCTGGGAGACGATGACGAAAGAGTCATTACAAGATCT
ATCGTATCAAATCCGAGCAGCAGGCTACTACTATCCACCACTTCTTCAAC
AAATATTCAAATGCTACAGCAGTTCACAAAACAAACTACTCAACAATTAA
CACAAATGCACAGTTAGATCTATCGTATCAAATCCGAGCAGCAGGCTACT
ACTATCCACCACTTCTTCAACAAATATTCAAATGCTACAGCAGTTCACAA
AACAAACTACTCAACAATTAACACAAATGCACAGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:205089..210327 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1000-1119:121 |
| Aaloc | 805-996:494 |
| Aaloc | 766-801:918 |
| Aaloc | 712-762:1183 |
| Aaloc | 640-708:1441 |
| Aaloc | 439-639:2437 |
| Aaloc | 268-438:3176 |
| Aaloc | 163-264:3447 |
| Aaloc | 91-162:3933 |
| Aaloc | 46-87:4244 |
| Aaloc | 1-42:5240 |
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